RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 ADAM30Q9UKF2 790 aa7.57□□□□□ -1.2
CNOT2-216ENST00000548939 RALGPS1Q5JS13 557 aa7.56□□□□□ -1.2
CNOT2-216ENST00000548939 CILP2Q8IUL8 1156 aa7.56□□□□□ -1.2
CNOT2-216ENST00000548939 FBXO15Q8NCQ5 510 aaPredicted RBP7.56□□□□□ -1.2
CNOT2-216ENST00000548939 ACSF2Q96CM8 615 aaPredicted RBP7.56□□□□□ -1.2
CNOT2-216ENST00000548939 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
CNOT2-216ENST00000548939 TLR6Q9Y2C9 796 aa7.56□□□□□ -1.2
CNOT2-216ENST00000548939 WASH4PA8MWX3 477 aa7.55□□□□□ -1.2
CNOT2-216ENST00000548939 HK2P52789 917 aa7.55□□□□□ -1.2
CNOT2-216ENST00000548939 TAF1CQ15572 869 aaPredicted RBP7.55□□□□□ -1.2
CNOT2-216ENST00000548939 ANKLE2Q86XL3 938 aa7.55□□□□□ -1.2
CNOT2-216ENST00000548939 ZSCAN18Q8TBC5 510 aaPredicted RBP7.55□□□□□ -1.2
CNOT2-216ENST00000548939 Q96M66 194 aa7.55□□□□□ -1.2
CNOT2-216ENST00000548939 NOC4LQ9BVI4 516 aaKnown RBP7.55□□□□□ -1.2
CNOT2-216ENST00000548939 TRIT1Q9H3H1 467 aaKnown RBP7.55□□□□□ -1.2
CNOT2-216ENST00000548939 PARP2Q9UGN5 583 aa7.55□□□□□ -1.2
CNOT2-216ENST00000548939 TMEM59LQ9UK28 342 aa7.55□□□□□ -1.2
CNOT2-216ENST00000548939 NFIBO00712 420 aa7.54□□□□□ -1.2
CNOT2-216ENST00000548939 CFPP27918 469 aa7.54□□□□□ -1.2
CNOT2-216ENST00000548939 TPP2P29144 1249 aaPredicted RBP7.54□□□□□ -1.2
CNOT2-216ENST00000548939 ST13P50502 369 aaKnown RBP7.54□□□□□ -1.2
CNOT2-216ENST00000548939 PSMD2Q13200 908 aa7.54□□□□□ -1.2
CNOT2-216ENST00000548939 MYLIPQ8WY64 445 aa7.54□□□□□ -1.2
CNOT2-216ENST00000548939 DUSP15Q9H1R2 295 aaPredicted RBP7.54□□□□□ -1.2
CNOT2-216ENST00000548939 CORINQ9Y5Q5 1042 aa7.54□□□□□ -1.2
CNOT2-216ENST00000548939 C1QTNF9P0C862 333 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 PLCG1P19174 1290 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 ERVFC1P60507 584 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 LCE4AQ5TA78 99 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 LRRC56Q8IYG6 542 aaPredicted RBP7.53□□□□□ -1.2
CNOT2-216ENST00000548939 PHC3Q8NDX5 983 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 FAM13CQ8NE31 585 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 CYB5D2Q8WUJ1 264 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 ADAMTS10Q9H324 1103 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 EPB41L4BQ9H329 900 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 DCP1AQ9NPI6 582 aaPredicted RBP7.53□□□□□ -1.2
CNOT2-216ENST00000548939 GPATCH2Q9NW75 528 aa7.53□□□□□ -1.2
CNOT2-216ENST00000548939 BPNT1O95861 308 aa7.52□□□□□ -1.21
CNOT2-216ENST00000548939 HPXP02790 462 aa7.52□□□□□ -1.21
CNOT2-216ENST00000548939 DAB2P98082 770 aa7.52□□□□□ -1.21
CNOT2-216ENST00000548939 GAB4Q2WGN9 574 aa7.52□□□□□ -1.21
CNOT2-216ENST00000548939 SND1Q7KZF4 910 aaKnown RBP eCLIP7.52□□□□□ -1.21
CNOT2-216ENST00000548939 CCDC84Q86UT8 332 aaPredicted RBP7.52□□□□□ -1.21
CNOT2-216ENST00000548939 PPP1R13LQ8WUF5 828 aa7.52□□□□□ -1.21
CNOT2-216ENST00000548939 DUSP13Q9UII6 198 aa7.52□□□□□ -1.21
CNOT2-216ENST00000548939 KCNH3Q9ULD8 1083 aa7.52□□□□□ -1.21
CNOT2-216ENST00000548939 UPK3BL1B0FP48 263 aa7.51□□□□□ -1.21
CNOT2-216ENST00000548939 UPK3BL2E5RIL1 263 aa7.51□□□□□ -1.21
CNOT2-216ENST00000548939 KRT1P04264 644 aa7.51□□□□□ -1.21
CNOT2-216ENST00000548939 TMEM253P0C7T8 217 aa7.51□□□□□ -1.21
CNOT2-216ENST00000548939 YARSP54577 528 aaKnown RBP7.51□□□□□ -1.21
CNOT2-216ENST00000548939 XPCQ01831 940 aaPredicted RBP7.51□□□□□ -1.21
CNOT2-216ENST00000548939 BNC2Q6ZN30 1099 aaPredicted RBP7.51□□□□□ -1.21
CNOT2-216ENST00000548939 C1QL4Q86Z23 238 aa7.51□□□□□ -1.21
CNOT2-216ENST00000548939 DTWD2Q8NBA8 298 aa7.51□□□□□ -1.21
CNOT2-216ENST00000548939 GPR62Q9BZJ7 368 aa7.51□□□□□ -1.21
CNOT2-216ENST00000548939 KCNK12Q9HB15 430 aa7.51□□□□□ -1.21
CNOT2-216ENST00000548939 SRFP11831 508 aa7.5□□□□□ -1.21
CNOT2-216ENST00000548939 EGR3Q06889 387 aa7.5□□□□□ -1.21
CNOT2-216ENST00000548939 TMEM201Q5SNT2 666 aa7.5□□□□□ -1.21
CNOT2-216ENST00000548939 TSPYL5Q86VY4 417 aaPredicted RBP7.5□□□□□ -1.21
CNOT2-216ENST00000548939 USP31Q70CQ4 1352 aa7.49□□□□□ -1.21
CNOT2-216ENST00000548939 F6X3S4 739 aa7.49□□□□□ -1.21
CNOT2-216ENST00000548939 CILPO75339 1184 aa7.49□□□□□ -1.21
CNOT2-216ENST00000548939 CTSHP09668 335 aa7.49□□□□□ -1.21
CNOT2-216ENST00000548939 TRHRP34981 398 aaPredicted RBP7.49□□□□□ -1.21
CNOT2-216ENST00000548939 LMNB2Q03252 620 aa7.49□□□□□ -1.21
CNOT2-216ENST00000548939 CAMK2GQ13555 558 aaPredicted RBP7.49□□□□□ -1.21
CNOT2-216ENST00000548939 TMC4Q7Z404 712 aa7.49□□□□□ -1.21
CNOT2-216ENST00000548939 FAM161BQ96MY7 647 aa7.49□□□□□ -1.21
CNOT2-216ENST00000548939 FAM221AA4D161 298 aa7.48□□□□□ -1.21
CNOT2-216ENST00000548939 PF4P02776 101 aa7.48□□□□□ -1.21
CNOT2-216ENST00000548939 ZSCAN22P10073 491 aaPredicted RBP7.48□□□□□ -1.21
CNOT2-216ENST00000548939 LTKP29376 864 aa7.48□□□□□ -1.21
CNOT2-216ENST00000548939 TNNI2P48788 182 aa7.48□□□□□ -1.21
CNOT2-216ENST00000548939 LCNL1Q6ZST4 164 aa7.48□□□□□ -1.21
CNOT2-216ENST00000548939 SIAH1Q8IUQ4 282 aa7.48□□□□□ -1.21
CNOT2-216ENST00000548939 RNF141Q8WVD5 230 aa7.48□□□□□ -1.21
CNOT2-216ENST00000548939 GATAD2BQ8WXI9 593 aa7.48□□□□□ -1.21
CNOT2-216ENST00000548939 NPIPB6E9PJ23 425 aa7.47□□□□□ -1.21
CNOT2-216ENST00000548939 LRRN2O75325 713 aa7.47□□□□□ -1.21
CNOT2-216ENST00000548939 F13A1P00488 732 aa7.47□□□□□ -1.21
CNOT2-216ENST00000548939 ATG14Q6ZNE5 492 aa7.47□□□□□ -1.21
CNOT2-216ENST00000548939 SLFN12Q8IYM2 578 aa7.47□□□□□ -1.21
CNOT2-216ENST00000548939 OXR1Q8N573 874 aa7.47□□□□□ -1.21
CNOT2-216ENST00000548939 PDZD8Q8NEN9 1154 aa7.47□□□□□ -1.21
CNOT2-216ENST00000548939 SYTL4Q96C24 671 aaPredicted RBP7.47□□□□□ -1.21
CNOT2-216ENST00000548939 RNF32Q9H0A6 362 aa7.47□□□□□ -1.21
CNOT2-216ENST00000548939 PCDHA11Q9Y5I1 949 aa7.47□□□□□ -1.21
CNOT2-216ENST00000548939 TCAF2A6NFQ2 919 aa7.46□□□□□ -1.22
CNOT2-216ENST00000548939 ZGLP1P0C6A0 271 aa7.46□□□□□ -1.22
CNOT2-216ENST00000548939 RELL1Q8IUW5 271 aa7.46□□□□□ -1.22
CNOT2-216ENST00000548939 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.22
CNOT2-216ENST00000548939 DHX38Q92620 1227 aaKnown RBP7.46□□□□□ -1.22
CNOT2-216ENST00000548939 CRELD1Q96HD1 420 aa7.46□□□□□ -1.22
CNOT2-216ENST00000548939 SLC26A8Q96RN1 970 aa7.46□□□□□ -1.22
CNOT2-216ENST00000548939 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
CNOT2-216ENST00000548939 C19orf44Q9H6X5 657 aa7.46□□□□□ -1.22
CNOT2-216ENST00000548939 CD320Q9NPF0 282 aa7.46□□□□□ -1.22
CNOT2-216ENST00000548939 REV1Q9UBZ9 1251 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms