RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 RBL2Q08999 1139 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 LONRF2Q1L5Z9 754 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 MUM1L1Q5H9M0 696 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 RAD9BQ6WBX8 426 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 USP49Q70CQ1 688 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 CNGA4Q8IV77 575 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 ZNF654Q8IZM8 581 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 OXER1Q8TDS5 423 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 FERMT2Q96AC1 680 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 PAGE5Q96GU1 130 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 PSD3Q9NYI0 1048 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 TRMT112Q9UI30 125 aaKnown RBP11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 USP5P45974 858 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 RASGRF1Q13972 1273 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 RRP12Q5JTH9 1297 aaKnown RBP11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 MSANTD4Q8NCY6 345 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 AK7Q96M32 723 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 ZKSCAN3Q9BRR0 538 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 RAB21Q9UL25 225 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 SLC4A4Q9Y6R1 1079 aa11.23□□□□□ -0.61
SMARCD1-205ENST00000548573 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 DPYDQ12882 1025 aa11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 EXOC4Q96A65 974 aa11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 IRX2Q9BZI1 471 aaPredicted RBP11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 LZTFL1Q9NQ48 299 aa11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 TOMM22Q9NS69 142 aa11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 ASAP1Q9ULH1 1129 aa11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 TTF2Q9UNY4 1162 aaKnown RBP11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 RTL9Q8NET4 1388 aa11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 BCL9LQ86UU0 1499 aa11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 STRCP1A6NGW2 1772 aa11.22□□□□□ -0.61
SMARCD1-205ENST00000548573 A0A087X0B3 334 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 PPP1R3GB7ZBB8 358 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 PRKAB2O43741 272 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 KRT2P35908 639 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 ST5P78524 1137 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 AKAP17AQ02040 695 aaKnown RBP11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 CMTR1Q8N1G2 835 aaKnown RBP11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 LCORLQ8N3X6 602 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 CCDC82Q8N4S0 544 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 UBAC1Q9BSL1 405 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 PHF20Q9BVI0 1012 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 ANKZF1Q9H8Y5 726 aa11.21□□□□□ -0.61
SMARCD1-205ENST00000548573 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 LRRC10BA6NIK2 292 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 ERVV-1B6SEH8 477 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 TUBBP07437 444 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 ATP2B1P20020 1258 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 SEC23AQ15436 765 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 BEND6Q5SZJ8 279 aaPredicted RBP11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 TMTC1Q8IUR5 882 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 NEK11Q8NG66 645 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 PIGBQ92521 554 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 SYMPKQ92797 1274 aaKnown RBP11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 EPSTI1Q96J88 318 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 TSPYL1Q9H0U9 437 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 ZCCHC17Q9NP64 241 aaKnown RBP11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 MYO1AQ9UBC5 1043 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 ANAPC4Q9UJX5 808 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 PLCH1Q4KWH8 1693 aa11.21□□□□□ -0.62
SMARCD1-205ENST00000548573 COL22A1Q8NFW1 1626 aaPredicted RBP11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 CTAGE9A4FU28 777 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 PRPF3O43395 683 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 ERLIN1O75477 346 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 GYPCP04921 128 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 CASP14P31944 242 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 AFMP43652 599 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 PPARAQ07869 468 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 SLC20A2Q08357 652 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 ZNF569Q5MCW4 686 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 HDXQ7Z353 690 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 HELBQ8NG08 1087 aaPredicted RBP11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 PYM1Q9BRP8 204 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 LIMA1Q9UHB6 759 aaKnown RBP11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 MYH6P13533 1939 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 NUP98P52948 1817 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 CYP19A1P11511 503 aaPredicted RBP11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 STX17P56962 302 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 SPAG1Q07617 926 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 TRIM14Q14142 442 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 PKN1Q16512 942 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 WHAMMP3Q1A5X7 153 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 KIF4BQ2VIQ3 1234 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 CPLX3Q8WVH0 158 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 ESR2Q92731 530 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 SHISA4Q96DD7 197 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 TMEM51Q9NW97 253 aa11.2□□□□□ -0.62
SMARCD1-205ENST00000548573 TNKSO95271 1327 aa11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 FXR1P51114 621 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 PIP4K2BP78356 416 aa11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 FUT2Q10981 343 aa11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 ZNF34Q8IZ26 560 aa11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 GBP3Q9H0R5 595 aa11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 BRMS1Q9HCU9 246 aa11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 RBM28Q9NW13 759 aaKnown RBP11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 VPS54Q9P1Q0 977 aa11.19□□□□□ -0.62
SMARCD1-205ENST00000548573 PUF60Q9UHX1 559 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms