RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 CAP2P40123 477 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 MLLT3P42568 568 aaPredicted RBP10.41□□□□□ -0.74
SP1-203ENST00000548560 MFAP1P55081 439 aaKnown RBP10.41□□□□□ -0.74
SP1-203ENST00000548560 TTC22Q5TAA0 569 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 GIMAP6Q6P9H5 292 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 METTL16Q86W50 562 aaKnown RBP10.41□□□□□ -0.74
SP1-203ENST00000548560 SEC62Q99442 399 aaKnown RBP10.41□□□□□ -0.74
SP1-203ENST00000548560 DNAJC18Q9H819 358 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 HELLSQ9NRZ9 838 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 DIAPH3Q9NSV4 1193 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 RNF186Q9NXI6 227 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 SWAP70Q9UH65 585 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 TSKSQ9UJT2 592 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 ZHX2Q9Y6X8 837 aa10.41□□□□□ -0.74
SP1-203ENST00000548560 USP17L5A8MUK1 530 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 USP17L12C9JPN9 530 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 USP17L21D6R901 530 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 CXCL11O14625 94 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 GDF11O95390 407 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 PLCD1P51178 756 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 CERKLQ49MI3 558 aaPredicted RBP10.4□□□□□ -0.74
SP1-203ENST00000548560 MCMDC2Q4G0Z9 681 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 NAPBQ9H115 298 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 CABP5Q9NP86 173 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 BMP2KQ9NSY1 1161 aaPredicted RBP10.4□□□□□ -0.74
SP1-203ENST00000548560 ZBTB21Q9ULJ3 1066 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 KCNH4Q9UQ05 1017 aa10.4□□□□□ -0.74
SP1-203ENST00000548560 A0A0D9SFI3 127 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 TRIM75PA6NK02 468 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 GSG1L2A8MUP6 293 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 MINDY4BA8MYZ0 360 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 PATL2C9JE40 543 aaKnown RBP10.39□□□□□ -0.75
SP1-203ENST00000548560 MPHOSPH10O00566 681 aaKnown RBP10.39□□□□□ -0.75
SP1-203ENST00000548560 SLC3A2P08195 630 aaKnown RBP10.39□□□□□ -0.75
SP1-203ENST00000548560 CYP2D6P10635 497 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 SDSP20132 328 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 NMIQ13287 307 aaPredicted RBP10.39□□□□□ -0.75
SP1-203ENST00000548560 ABCB5Q2M3G0 1257 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 C12orf60Q5U649 245 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 ERICH6BQ5W0A0 696 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 CTR9Q6PD62 1173 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 CCDC129Q6ZRS4 1044 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 FASTKD5Q7L8L6 764 aaKnown RBP10.39□□□□□ -0.75
SP1-203ENST00000548560 ZNF280CQ8ND82 737 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 BRI3BPQ8WY22 251 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 FAM227BQ96M60 508 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 ZNF287Q9HBT7 754 aa10.39□□□□□ -0.75
SP1-203ENST00000548560 CCDC171Q6TFL3 1326 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 CYP2D7A0A087X1C5 515 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 A0A0G2JLL6 359 aaPredicted RBP10.38□□□□□ -0.75
SP1-203ENST00000548560 IGF2BP3O00425 579 aaKnown RBP eCLIP10.38□□□□□ -0.75
SP1-203ENST00000548560 GH2P01242 217 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 GSPT1P15170 499 aaKnown RBP10.38□□□□□ -0.75
SP1-203ENST00000548560 SHMT1P34896 483 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 GABPAQ06546 454 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 RAB3GAP1Q15042 981 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 TAF1CQ15572 869 aaPredicted RBP10.38□□□□□ -0.75
SP1-203ENST00000548560 SBK1Q52WX2 424 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 TATDN1Q6P1N9 297 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 GADL1Q6ZQY3 521 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 C16orf86Q6ZW13 317 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 PRRT2Q7Z6L0 340 aaPredicted RBP10.38□□□□□ -0.75
SP1-203ENST00000548560 CCDC84Q86UT8 332 aaPredicted RBP10.38□□□□□ -0.75
SP1-203ENST00000548560 IFNL3Q8IZI9 196 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 ABHD8Q96I13 439 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 FEZ1Q99689 392 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 EPB41L4AQ9HCS5 686 aaPredicted RBP10.38□□□□□ -0.75
SP1-203ENST00000548560 ZCCHC17Q9NP64 241 aaKnown RBP10.38□□□□□ -0.75
SP1-203ENST00000548560 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.38□□□□□ -0.75
SP1-203ENST00000548560 AFG3L2Q9Y4W6 797 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 GREB1LQ9C091 1923 aaPredicted RBP10.38□□□□□ -0.75
SP1-203ENST00000548560 ROBO3Q96MS0 1386 aa10.38□□□□□ -0.75
SP1-203ENST00000548560 BTBD19C9JJ37 291 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 MGAMO43451 1857 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 TBC1D8O95759 1140 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 CDK8P49336 464 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 SPP2Q13103 211 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 DSG2Q14126 1118 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 RRP1BQ14684 758 aaKnown RBP10.37□□□□□ -0.75
SP1-203ENST00000548560 CWC27Q6UX04 472 aaKnown RBP10.37□□□□□ -0.75
SP1-203ENST00000548560 ANKRD23Q86SG2 305 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 SLC44A5Q8NCS7 719 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 RUFY2Q8WXA3 655 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 DYNLL2Q96FJ2 89 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 CCDC17Q96LX7 622 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 MKNK2Q9HBH9 465 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 ZFYVE28Q9HCC9 887 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 TMOD4Q9NZQ9 345 aa10.37□□□□□ -0.75
SP1-203ENST00000548560 RAD50Q92878 1312 aa10.36□□□□□ -0.75
SP1-203ENST00000548560 C19orf81C9J6K1 198 aa10.36□□□□□ -0.75
SP1-203ENST00000548560 USP17L10C9JJH3 530 aa10.36□□□□□ -0.75
SP1-203ENST00000548560 PDE4BQ07343 736 aa10.36□□□□□ -0.75
SP1-203ENST00000548560 PABPC4Q13310 644 aaKnown RBP eCLIP10.36□□□□□ -0.75
SP1-203ENST00000548560 CRHR2Q13324 411 aa10.36□□□□□ -0.75
SP1-203ENST00000548560 MTMR2Q13614 643 aa10.36□□□□□ -0.75
SP1-203ENST00000548560 TMEM179Q6ZVK1 233 aa10.36□□□□□ -0.75
SP1-203ENST00000548560 ZNF589Q86UQ0 364 aaPredicted RBP10.36□□□□□ -0.75
SP1-203ENST00000548560 STK11IPQ8N1F8 1099 aa10.36□□□□□ -0.75
SP1-203ENST00000548560 FAM43AQ8N2R8 423 aa10.36□□□□□ -0.75
SP1-203ENST00000548560 PROCA1Q8NCQ7 364 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms