RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 FEZ1Q99689 392 aa20.11■□□□□ 0.81
SSH1-208ENST00000548522 APBA2Q99767 749 aa20.11■□□□□ 0.81
SSH1-208ENST00000548522 FLRT1Q9NZU1 646 aa20.11■□□□□ 0.81
SSH1-208ENST00000548522 NOP58Q9Y2X3 529 aaKnown RBP20.11■□□□□ 0.81
SSH1-208ENST00000548522 USP5P45974 858 aa20.1■□□□□ 0.81
SSH1-208ENST00000548522 RAB3GAP1Q15042 981 aa20.1■□□□□ 0.81
SSH1-208ENST00000548522 LRRC26Q2I0M4 334 aa20.1■□□□□ 0.81
SSH1-208ENST00000548522 TATDN1Q6P1N9 297 aa20.1■□□□□ 0.81
SSH1-208ENST00000548522 CCAR1Q8IX12 1150 aaKnown RBP20.1■□□□□ 0.81
SSH1-208ENST00000548522 C12orf42Q96LP6 360 aa20.1■□□□□ 0.81
SSH1-208ENST00000548522 VCAM1P19320 739 aa20.09■□□□□ 0.81
SSH1-208ENST00000548522 ITPRIPQ8IWB1 547 aa20.09■□□□□ 0.81
SSH1-208ENST00000548522 SERPINB13Q9UIV8 391 aa20.09■□□□□ 0.81
SSH1-208ENST00000548522 CUL9Q8IWT3 2517 aa20.09■□□□□ 0.81
SSH1-208ENST00000548522 TDHQ8IZJ6 230 aa20.08■□□□□ 0.81
SSH1-208ENST00000548522 GTF3C2Q8WUA4 911 aaPredicted RBP20.08■□□□□ 0.81
SSH1-208ENST00000548522 EHD4Q9H223 541 aa20.08■□□□□ 0.81
SSH1-208ENST00000548522 BTBD7Q9P203 1132 aa20.08■□□□□ 0.81
SSH1-208ENST00000548522 USP17L15C9J2P7 530 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 USP17L13C9JLJ4 530 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 USP17L11C9JVI0 530 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 USP17L18D6R9N7 530 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 USP17L22D6RA61 530 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 USP17L17D6RBQ6 530 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 USP17L19D6RCP7 530 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 USP17L20D6RJB6 530 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 SHMT1P34896 483 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 PLCD1P51178 756 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 USP17L24Q0WX57 530 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 MAP2K5Q13163 448 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 WDR78Q5VTH9 848 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 FTSJ3Q8IY81 847 aaKnown RBP20.07■□□□□ 0.8
SSH1-208ENST00000548522 TRMT44Q8IYL2 757 aaKnown RBP20.07■□□□□ 0.8
SSH1-208ENST00000548522 DEFB123Q8N688 67 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 CWC22Q9HCG8 908 aaKnown RBP20.07■□□□□ 0.8
SSH1-208ENST00000548522 EXOC6BQ9Y2D4 811 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 RABGAP1Q9Y3P9 1069 aa20.07■□□□□ 0.8
SSH1-208ENST00000548522 MYH1P12882 1939 aa20.06■□□□□ 0.8
SSH1-208ENST00000548522 DLL1O00548 723 aa20.06■□□□□ 0.8
SSH1-208ENST00000548522 GUCY1A2P33402 732 aa20.06■□□□□ 0.8
SSH1-208ENST00000548522 ABCB5Q2M3G0 1257 aa20.06■□□□□ 0.8
SSH1-208ENST00000548522 LRIT3Q3SXY7 679 aa20.06■□□□□ 0.8
SSH1-208ENST00000548522 CERKLQ49MI3 558 aaPredicted RBP20.06■□□□□ 0.8
SSH1-208ENST00000548522 CEP85Q6P2H3 762 aa20.06■□□□□ 0.8
SSH1-208ENST00000548522 CATSPERGQ6ZRH7 1159 aa20.06■□□□□ 0.8
SSH1-208ENST00000548522 RIOK1Q9BRS2 568 aaKnown RBP20.06■□□□□ 0.8
SSH1-208ENST00000548522 UBE2OQ9C0C9 1292 aaKnown RBP20.06■□□□□ 0.8
SSH1-208ENST00000548522 KIAA1683Q9H0B3 1180 aa20.06■□□□□ 0.8
SSH1-208ENST00000548522 SPDYE16A6NNV3 312 aaPredicted RBP20.05■□□□□ 0.8
SSH1-208ENST00000548522 MDM2Q00987 491 aaPredicted RBP20.05■□□□□ 0.8
SSH1-208ENST00000548522 AACSQ86V21 672 aa20.05■□□□□ 0.8
SSH1-208ENST00000548522 RPAP3Q9H6T3 665 aaPredicted RBP20.05■□□□□ 0.8
SSH1-208ENST00000548522 EYSQ5T1H1 3165 aa20.04■□□□□ 0.8
SSH1-208ENST00000548522 IGSF3O75054 1194 aa20.04■□□□□ 0.8
SSH1-208ENST00000548522 PTPREP23469 700 aa20.04■□□□□ 0.8
SSH1-208ENST00000548522 TRPV1Q8NER1 839 aa20.04■□□□□ 0.8
SSH1-208ENST00000548522 NPLOC4Q8TAT6 608 aa20.04■□□□□ 0.8
SSH1-208ENST00000548522 EDC3Q96F86 508 aaKnown RBP20.04■□□□□ 0.8
SSH1-208ENST00000548522 FRMPD3Q5JV73 1810 aa20.04■□□□□ 0.8
SSH1-208ENST00000548522 VCANP13611 3396 aa20.03■□□□□ 0.8
SSH1-208ENST00000548522 CYP2C19P33261 490 aa20.03■□□□□ 0.8
SSH1-208ENST00000548522 USP14P54578 494 aa20.03■□□□□ 0.8
SSH1-208ENST00000548522 MAP3K12Q12852 859 aa20.03■□□□□ 0.8
SSH1-208ENST00000548522 GRB14Q14449 540 aa20.03■□□□□ 0.8
SSH1-208ENST00000548522 SEPT2Q15019 361 aa20.03■□□□□ 0.8
SSH1-208ENST00000548522 IL1RAPL2Q9NP60 686 aa20.03■□□□□ 0.8
SSH1-208ENST00000548522 CDH23Q9H251 3354 aa20.03■□□□□ 0.8
SSH1-208ENST00000548522 A0A1W2PRG0 241 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 SLC15A5A6NIM6 579 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 CCNA1P78396 465 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 GABPAQ06546 454 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 MFSD14CQ5VZR4 134 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 GPR153Q6NV75 609 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 LBX2Q6XYB7 198 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 TTC6Q86TZ1 520 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 CERS3Q8IU89 383 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 SENP6Q9GZR1 1112 aaPredicted RBP20.02■□□□□ 0.8
SSH1-208ENST00000548522 DDX20Q9UHI6 824 aaKnown RBP20.02■□□□□ 0.8
SSH1-208ENST00000548522 NAV1Q8NEY1 1877 aa20.02■□□□□ 0.8
SSH1-208ENST00000548522 HOXC6P09630 235 aa20.01■□□□□ 0.79
SSH1-208ENST00000548522 CYP2D6P10635 497 aa20.01■□□□□ 0.79
SSH1-208ENST00000548522 ATN1P54259 1190 aaPredicted RBP20.01■□□□□ 0.79
SSH1-208ENST00000548522 KIAA1755Q5JYT7 1200 aa20.01■□□□□ 0.79
SSH1-208ENST00000548522 CLEC10AQ8IUN9 316 aa20.01■□□□□ 0.79
SSH1-208ENST00000548522 SLC44A5Q8NCS7 719 aa20.01■□□□□ 0.79
SSH1-208ENST00000548522 MTMR10Q9NXD2 777 aa20.01■□□□□ 0.79
SSH1-208ENST00000548522 MAGEB6P1A0A0J9YX57 407 aa20■□□□□ 0.79
SSH1-208ENST00000548522 GLRX3O76003 335 aaKnown RBP20■□□□□ 0.79
SSH1-208ENST00000548522 IGHA2P01877 340 aa20■□□□□ 0.79
SSH1-208ENST00000548522 PDE6AP16499 860 aa20■□□□□ 0.79
SSH1-208ENST00000548522 CNGA1P29973 690 aa20■□□□□ 0.79
SSH1-208ENST00000548522 PANK1Q8TE04 598 aa20■□□□□ 0.79
SSH1-208ENST00000548522 SDR42E1Q8WUS8 393 aa20■□□□□ 0.79
SSH1-208ENST00000548522 CABP5Q9NP86 173 aa20■□□□□ 0.79
SSH1-208ENST00000548522 MPHOSPH10O00566 681 aaKnown RBP19.99■□□□□ 0.79
SSH1-208ENST00000548522 POLR3DP05423 398 aaPredicted RBP19.99■□□□□ 0.79
SSH1-208ENST00000548522 ATP2B2Q01814 1243 aa19.99■□□□□ 0.79
SSH1-208ENST00000548522 SLFNL1Q499Z3 407 aa19.99■□□□□ 0.79
SSH1-208ENST00000548522 LCORLQ8N3X6 602 aa19.99■□□□□ 0.79
SSH1-208ENST00000548522 MOV10L1Q9BXT6 1211 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms