RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 TATDN1Q6P1N9 297 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 FEZ1Q99689 392 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 EHD4Q9H223 541 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 SERPINB13Q9UIV8 391 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 COL6A3P12111 3177 aa24.46■■□□□ 1.51
GATC-202ENST00000548171 CCND3P30281 292 aaPredicted RBP24.45■■□□□ 1.5
GATC-202ENST00000548171 MAP2K5Q13163 448 aa24.45■■□□□ 1.5
GATC-202ENST00000548171 ZKSCAN2Q63HK3 967 aa24.45■■□□□ 1.5
GATC-202ENST00000548171 POTEEQ6S8J3 1075 aa24.45■■□□□ 1.5
GATC-202ENST00000548171 TMEM57Q8N5G2 664 aa24.45■■□□□ 1.5
GATC-202ENST00000548171 DBNLQ9UJU6 430 aaKnown RBP24.45■■□□□ 1.5
GATC-202ENST00000548171 CUL9Q8IWT3 2517 aa24.45■■□□□ 1.5
GATC-202ENST00000548171 CCER2I3L3R5 266 aa24.44■■□□□ 1.5
GATC-202ENST00000548171 USP5P45974 858 aa24.44■■□□□ 1.5
GATC-202ENST00000548171 DYNLL1P63167 89 aaKnown RBP24.44■■□□□ 1.5
GATC-202ENST00000548171 EDC3Q96F86 508 aaKnown RBP24.44■■□□□ 1.5
GATC-202ENST00000548171 NOP58Q9Y2X3 529 aaKnown RBP24.44■■□□□ 1.5
GATC-202ENST00000548171 IDH1O75874 414 aaKnown RBP24.43■■□□□ 1.5
GATC-202ENST00000548171 MFSD14CQ5VZR4 134 aa24.43■■□□□ 1.5
GATC-202ENST00000548171 TTC6Q86TZ1 520 aa24.43■■□□□ 1.5
GATC-202ENST00000548171 KIAA1683Q9H0B3 1180 aa24.43■■□□□ 1.5
GATC-202ENST00000548171 STXBP5LQ9Y2K9 1186 aa24.43■■□□□ 1.5
GATC-202ENST00000548171 SLC15A5A6NIM6 579 aa24.42■■□□□ 1.5
GATC-202ENST00000548171 LRRC26Q2I0M4 334 aa24.42■■□□□ 1.5
GATC-202ENST00000548171 LBX2Q6XYB7 198 aa24.42■■□□□ 1.5
GATC-202ENST00000548171 CATSPERGQ6ZRH7 1159 aa24.42■■□□□ 1.5
GATC-202ENST00000548171 MIGA1Q8NAN2 632 aa24.42■■□□□ 1.5
GATC-202ENST00000548171 IVNS1ABPQ9Y6Y0 642 aa24.42■■□□□ 1.5
GATC-202ENST00000548171 MSCO60682 206 aa24.41■■□□□ 1.5
GATC-202ENST00000548171 CNMDO75829 334 aa24.41■■□□□ 1.5
GATC-202ENST00000548171 RAB3GAP1Q15042 981 aa24.41■■□□□ 1.5
GATC-202ENST00000548171 ZYXQ15942 572 aaKnown RBP24.41■■□□□ 1.5
GATC-202ENST00000548171 ABCB5Q2M3G0 1257 aa24.41■■□□□ 1.5
GATC-202ENST00000548171 CERKLQ49MI3 558 aaPredicted RBP24.41■■□□□ 1.5
GATC-202ENST00000548171 MTMR10Q9NXD2 777 aa24.41■■□□□ 1.5
GATC-202ENST00000548171 HOXC6P09630 235 aa24.4■■□□□ 1.5
GATC-202ENST00000548171 VCAM1P19320 739 aa24.4■■□□□ 1.5
GATC-202ENST00000548171 MAP3K12Q12852 859 aa24.4■■□□□ 1.5
GATC-202ENST00000548171 Q7L0L9 218 aa24.4■■□□□ 1.5
GATC-202ENST00000548171 MAGEB6Q8N7X4 407 aa24.4■■□□□ 1.5
GATC-202ENST00000548171 CABP5Q9NP86 173 aa24.4■■□□□ 1.5
GATC-202ENST00000548171 NAV1Q8NEY1 1877 aa24.4■■□□□ 1.5
GATC-202ENST00000548171 PTPREP23469 700 aa24.39■■□□□ 1.49
GATC-202ENST00000548171 WDR78Q5VTH9 848 aa24.39■■□□□ 1.49
GATC-202ENST00000548171 EAF2Q96CJ1 260 aaPredicted RBP24.39■■□□□ 1.49
GATC-202ENST00000548171 CCDC8Q9H0W5 538 aaPredicted RBP24.39■■□□□ 1.49
GATC-202ENST00000548171 TLR7Q9NYK1 1049 aaKnown RBP24.39■■□□□ 1.49
GATC-202ENST00000548171 ZNF236Q9UL36 1845 aa24.39■■□□□ 1.49
GATC-202ENST00000548171 ATP2B2Q01814 1243 aa24.38■■□□□ 1.49
GATC-202ENST00000548171 GRB14Q14449 540 aa24.38■■□□□ 1.49
GATC-202ENST00000548171 DDX20Q9UHI6 824 aaKnown RBP24.38■■□□□ 1.49
GATC-202ENST00000548171 MYH8P13535 1937 aa24.37■■□□□ 1.49
GATC-202ENST00000548171 LPAR1Q92633 364 aa24.37■■□□□ 1.49
GATC-202ENST00000548171 C1orf115Q9H7X2 142 aa24.37■■□□□ 1.49
GATC-202ENST00000548171 FLRT1Q9NZU1 646 aa24.37■■□□□ 1.49
GATC-202ENST00000548171 NDUFB9Q9Y6M9 179 aa24.37■■□□□ 1.49
GATC-202ENST00000548171 RLFQ13129 1914 aa24.36■■□□□ 1.49
GATC-202ENST00000548171 SHMT1P34896 483 aa24.36■■□□□ 1.49
GATC-202ENST00000548171 MDM2Q00987 491 aaPredicted RBP24.36■■□□□ 1.49
GATC-202ENST00000548171 FTSJ3Q8IY81 847 aaKnown RBP24.36■■□□□ 1.49
GATC-202ENST00000548171 ACER1Q8TDN7 264 aa24.36■■□□□ 1.49
GATC-202ENST00000548171 LBHD1Q9BQE6 289 aaPredicted RBP24.36■■□□□ 1.49
GATC-202ENST00000548171 SENP6Q9GZR1 1112 aaPredicted RBP24.36■■□□□ 1.49
GATC-202ENST00000548171 BTBD7Q9P203 1132 aa24.36■■□□□ 1.49
GATC-202ENST00000548171 SPDYE16A6NNV3 312 aaPredicted RBP24.35■■□□□ 1.49
GATC-202ENST00000548171 DNM1LO00429 736 aa24.35■■□□□ 1.49
GATC-202ENST00000548171 ERC1Q8IUD2 1116 aa24.35■■□□□ 1.49
GATC-202ENST00000548171 RPAP3Q9H6T3 665 aaPredicted RBP24.35■■□□□ 1.49
GATC-202ENST00000548171 LTBP2Q14767 1821 aa24.34■■□□□ 1.49
GATC-202ENST00000548171 CNGA1P29973 690 aa24.34■■□□□ 1.49
GATC-202ENST00000548171 FAM109BQ6ICB4 259 aaPredicted RBP24.34■■□□□ 1.49
GATC-202ENST00000548171 ANTXR1Q9H6X2 564 aa24.34■■□□□ 1.49
GATC-202ENST00000548171 A0A0G2JMZ2 1700 aa24.34■■□□□ 1.49
GATC-202ENST00000548171 STRNO43815 780 aa24.33■■□□□ 1.49
GATC-202ENST00000548171 IGHA2P01877 340 aa24.33■■□□□ 1.49
GATC-202ENST00000548171 POLR3DP05423 398 aaPredicted RBP24.33■■□□□ 1.49
GATC-202ENST00000548171 PLCD1P51178 756 aa24.33■■□□□ 1.49
GATC-202ENST00000548171 ITPRIPQ8IWB1 547 aa24.33■■□□□ 1.49
GATC-202ENST00000548171 RIOK1Q9BRS2 568 aaKnown RBP24.33■■□□□ 1.49
GATC-202ENST00000548171 HOXC10Q9NYD6 342 aa24.33■■□□□ 1.49
GATC-202ENST00000548171 PRKAG2Q9UGJ0 569 aa24.33■■□□□ 1.49
GATC-202ENST00000548171 MAGEB6P1A0A0J9YX57 407 aa24.32■■□□□ 1.48
GATC-202ENST00000548171 COG2Q14746 738 aa24.32■■□□□ 1.48
GATC-202ENST00000548171 TTF1Q15361 905 aaPredicted RBP24.32■■□□□ 1.48
GATC-202ENST00000548171 NPLOC4Q8TAT6 608 aa24.32■■□□□ 1.48
GATC-202ENST00000548171 A0A0C4DFX4 3053 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 CYBAP13498 195 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 CYP2C19P33261 490 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 GUCY1A2P33402 732 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 GABPAQ06546 454 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 SEPT2Q15019 361 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 OLFML2BQ68BL8 750 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 DPP9Q86TI2 863 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 AACSQ86V21 672 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 ARRDC4Q8NCT1 418 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 SHCBP1Q8NEM2 672 aa24.31■■□□□ 1.48
GATC-202ENST00000548171 ZNFX1Q9P2E3 1918 aaKnown RBP24.3■■□□□ 1.48
GATC-202ENST00000548171 CRNKL1Q9BZJ0 848 aaKnown RBP24.3■■□□□ 1.48
GATC-202ENST00000548171 PARP14Q460N5 1801 aa24.29■■□□□ 1.48
GATC-202ENST00000548171 POTEB2H3BUK9 544 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms