RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 ESR1P03372 595 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 CHRNEQ04844 493 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 TNK2Q07912 1038 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 NFIXQ14938 502 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 SNX17Q15036 470 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 RALGPS1Q5JS13 557 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 PRAMEF13Q5VWM6 474 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 PCNX4Q63HM2 1172 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 MPRIPQ6WCQ1 1025 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 TMC7Q7Z402 723 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 TXNDC2Q86VQ3 553 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 CREG2Q8IUH2 290 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 PLPPR2Q96GM1 343 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 C20orf173Q96LM9 149 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 RNF32Q9H0A6 362 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 FBRSQ9HAH7 460 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 RTEL1Q9NZ71 1219 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 DCTN4Q9UJW0 460 aa4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 CNOT6Q9ULM6 557 aaKnown RBP4.72□□□□□ -1.65
DEPDC4-204ENST00000547823 PAGE1O75459 146 aa4.71□□□□□ -1.66
DEPDC4-204ENST00000547823 PLCB3Q01970 1234 aa4.71□□□□□ -1.66
DEPDC4-204ENST00000547823 DIEXFQ68CQ4 756 aaKnown RBP4.71□□□□□ -1.66
DEPDC4-204ENST00000547823 SPPL2CQ8IUH8 684 aa4.71□□□□□ -1.66
DEPDC4-204ENST00000547823 CXorf38Q8TB03 319 aa4.71□□□□□ -1.66
DEPDC4-204ENST00000547823 KCNC2Q96PR1 638 aa4.71□□□□□ -1.66
DEPDC4-204ENST00000547823 MCOLN1Q9GZU1 580 aa4.71□□□□□ -1.66
DEPDC4-204ENST00000547823 KCNH3Q9ULD8 1083 aa4.71□□□□□ -1.66
DEPDC4-204ENST00000547823 HRKO00198 91 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 SASH1O94885 1247 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 BMP7P18075 431 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 LMNB1P20700 586 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 DUSP4Q13115 394 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 DSC3Q14574 896 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 INPP5AQ14642 412 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 NKG7Q16617 165 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 GAB4Q2WGN9 574 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 WIPI1Q5MNZ9 446 aaPredicted RBP4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 TMEM132EQ6IEE7 984 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 SV2BQ7L1I2 683 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 MRPL41Q8IXM3 137 aaKnown RBP4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 INTS4Q96HW7 963 aaKnown RBP4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 GPR62Q9BZJ7 368 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 DUSP13Q9UII6 198 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 SPG7Q9UQ90 795 aa4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 YBX2Q9Y2T7 364 aaKnown RBP4.7□□□□□ -1.66
DEPDC4-204ENST00000547823 CARNS1A5YM72 827 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 TREHO43280 583 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 TPP2P29144 1249 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 ERVFC1P60507 584 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 RPS26P62854 115 aaKnown RBP4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 PDE4BQ07343 736 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 SLC6A19Q695T7 634 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 ALG1LQ6GMV1 187 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 ANKS4BQ8N8V4 417 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 MARCH10Q8NA82 808 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 GAL3ST3Q96A11 431 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 ADAMTS10Q9H324 1103 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 ZNF552Q9H707 407 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 FAM8A1Q9UBU6 413 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 GTF3C3Q9Y5Q9 886 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 CNTNAP4Q9C0A0 1308 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 LMTK3Q96Q04 1460 aa4.69□□□□□ -1.66
DEPDC4-204ENST00000547823 A0A0G2JLL6 359 aaPredicted RBP4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 ZGLP1P0C6A0 271 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 GRK4P32298 578 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 ATP2B2Q01814 1243 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 EGR3Q06889 387 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 OLFML2BQ68BL8 750 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 ZNF605Q86T29 641 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 RIN3Q8TB24 985 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 FRMD6Q96NE9 622 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 KCNK12Q9HB15 430 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 KCTD3Q9Y597 815 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 SCRIBQ14160 1630 aa4.68□□□□□ -1.66
DEPDC4-204ENST00000547823 FBXO24O75426 580 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 CELA3AP09093 270 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 LTKP29376 864 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 PDE6BP35913 854 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 RASIP1Q5U651 963 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 CDH24Q86UP0 819 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 TSPYL5Q86VY4 417 aaPredicted RBP4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 SP8Q8IXZ3 490 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 XAGE3Q8WTP9 111 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 DUSP15Q9H1R2 295 aaPredicted RBP4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 SP110Q9HB58 689 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 ADAM30Q9UKF2 790 aa4.67□□□□□ -1.66
DEPDC4-204ENST00000547823 MYOCOSA0A1B0GUC4 107 aa4.66□□□□□ -1.66
DEPDC4-204ENST00000547823 OR14I1A6ND48 311 aa4.66□□□□□ -1.66
DEPDC4-204ENST00000547823 SOWAHDA6NJG2 315 aa4.66□□□□□ -1.66
DEPDC4-204ENST00000547823 PGRP06401 933 aa4.66□□□□□ -1.66
DEPDC4-204ENST00000547823 TTBK2Q6IQ55 1244 aa4.66□□□□□ -1.66
DEPDC4-204ENST00000547823 TMEM87BQ96K49 555 aa4.66□□□□□ -1.66
DEPDC4-204ENST00000547823 SIGLEC10Q96LC7 697 aa4.66□□□□□ -1.66
DEPDC4-204ENST00000547823 C12orf49Q9H741 205 aa4.66□□□□□ -1.66
DEPDC4-204ENST00000547823 CEP131Q9UPN4 1083 aa4.66□□□□□ -1.66
DEPDC4-204ENST00000547823 THOC2Q8NI27 1593 aaKnown RBP4.65□□□□□ -1.66
DEPDC4-204ENST00000547823 CELA3BP08861 270 aa4.65□□□□□ -1.67
DEPDC4-204ENST00000547823 TRHRP34981 398 aaPredicted RBP4.65□□□□□ -1.67
DEPDC4-204ENST00000547823 ZSCAN29Q8IWY8 852 aaPredicted RBP4.65□□□□□ -1.67
DEPDC4-204ENST00000547823 DNAJB8Q8NHS0 232 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms