RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CCDC183Q5T5S1 534 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 NBPF11Q86T75 865 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 NKX2-3Q8TAU0 364 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 SH3GLB2Q9NR46 395 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 POLR3EQ9NVU0 708 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 TFIP11Q9UBB9 837 aaKnown RBP15.54■□□□□ 0.08
PTCH1-215ENST00000547672 TCHHQ07283 1943 aa15.54■□□□□ 0.08
PTCH1-215ENST00000547672 PLIN4Q96Q06 1357 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 CDK5RAP2Q96SN8 1893 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 RPS12P25398 132 aaKnown RBP15.53■□□□□ 0.08
PTCH1-215ENST00000547672 CALML3P27482 149 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 NOVP48745 357 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 GUCY1B3Q02153 619 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 KIF23Q02241 960 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-215ENST00000547672 GRM4Q14833 912 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 ZSCAN23Q3MJ62 389 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 CFAP100Q494V2 611 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 GALNT17Q6IS24 598 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 RCSD1Q6JBY9 416 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 ZSCAN29Q8IWY8 852 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-215ENST00000547672 MTMR14Q8NCE2 650 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 MXD3Q9BW11 206 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 GDPD2Q9HCC8 539 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 KCNQ5Q9NR82 932 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-215ENST00000547672 IL17RBQ9NRM6 502 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 STX8Q9UNK0 236 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 CEP131Q9UPN4 1083 aa15.53■□□□□ 0.08
PTCH1-215ENST00000547672 V9GY48 417 aaPredicted RBP15.53■□□□□ 0.08
PTCH1-215ENST00000547672 COL2A1P02458 1487 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-215ENST00000547672 MMP1P03956 469 aa15.52■□□□□ 0.08
PTCH1-215ENST00000547672 STK38Q15208 465 aa15.52■□□□□ 0.08
PTCH1-215ENST00000547672 RILPL1Q5EBL4 403 aa15.52■□□□□ 0.08
PTCH1-215ENST00000547672 CIAPIN1Q6FI81 312 aa15.52■□□□□ 0.08
PTCH1-215ENST00000547672 CCDC12Q8WUD4 166 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-215ENST00000547672 ANP32BQ92688 251 aaKnown RBP15.52■□□□□ 0.08
PTCH1-215ENST00000547672 DDX19AQ9NUU7 478 aaKnown RBP15.52■□□□□ 0.08
PTCH1-215ENST00000547672 PPP1R1BQ9UD71 204 aaPredicted RBP15.52■□□□□ 0.08
PTCH1-215ENST00000547672 YDJCA8MPS7 323 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 PSMD14O00487 310 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 TTLL1O95922 423 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 BMP15O95972 392 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 PARP1P09874 1014 aaKnown RBP15.51■□□□□ 0.07
PTCH1-215ENST00000547672 FOSBP53539 338 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 MYSM1Q5VVJ2 828 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 GMLQ99445 158 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 TMEM47Q9BQJ4 181 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.51■□□□□ 0.07
PTCH1-215ENST00000547672 MTMR4Q9NYA4 1195 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 HERC5Q9UII4 1024 aaKnown RBP15.51■□□□□ 0.07
PTCH1-215ENST00000547672 PSME4Q14997 1843 aa15.51■□□□□ 0.07
PTCH1-215ENST00000547672 ECM29Q5VYK3 1845 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 SRCAPQ6ZRS2 3230 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 FSD2A1L4K1 749 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 SMIM22K7EJ46 135 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 CTAGE5O15320 804 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 NMT2O60551 498 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 GADD45BO75293 160 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-215ENST00000547672 RAD17O75943 681 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 SCG2P13521 617 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 NASPP49321 788 aaPredicted RBP15.5■□□□□ 0.07
PTCH1-215ENST00000547672 FUT2Q10981 343 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 SLC4A8Q2Y0W8 1093 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 ASPRV1Q53RT3 343 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 CCDC73Q6ZRK6 1079 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 METTL16Q86W50 562 aaKnown RBP15.5■□□□□ 0.07
PTCH1-215ENST00000547672 NOSTRINQ8IVI9 506 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 CCDC82Q8N4S0 544 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 KANSL2Q9H9L4 492 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 DDX4Q9NQI0 724 aaKnown RBP15.5■□□□□ 0.07
PTCH1-215ENST00000547672 SYNPO2Q9UMS6 1093 aa15.5■□□□□ 0.07
PTCH1-215ENST00000547672 NOL7Q9UMY1 257 aaKnown RBP15.5■□□□□ 0.07
PTCH1-215ENST00000547672 DDX60LQ5H9U9 1706 aaKnown RBP15.5■□□□□ 0.07
PTCH1-215ENST00000547672 A0A1W2PQ27 194 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 A0A1W2PQ64 194 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 A0A1W2PQD8 194 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 PALM3A6NDB9 673 aaPredicted RBP15.49■□□□□ 0.07
PTCH1-215ENST00000547672 SPDYE2BA6NHP3 402 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 hCG_1984214I3L0E3 225 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 SPDYE6P0CI01 402 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 KRT2P35908 639 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 ME1P48163 572 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 TNNI2P48788 182 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 EIF6P56537 245 aaKnown RBP15.49■□□□□ 0.07
PTCH1-215ENST00000547672 PFKFB3Q16875 520 aaPredicted RBP15.49■□□□□ 0.07
PTCH1-215ENST00000547672 CERKLQ49MI3 558 aaPredicted RBP15.49■□□□□ 0.07
PTCH1-215ENST00000547672 ANO1Q5XXA6 986 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 ADALQ6DHV7 355 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 FAM173BQ6P4H8 233 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 ZNF713Q8N859 430 aaPredicted RBP15.49■□□□□ 0.07
PTCH1-215ENST00000547672 SLC44A5Q8NCS7 719 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 CCDC148Q8NFR7 591 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 BICD2Q8TD16 824 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 FAM151AQ8WW52 585 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 SGIP1Q9BQI5 828 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 SPZ1Q9BXG8 430 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 SPON1Q9HCB6 807 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 CABP5Q9NP86 173 aa15.49■□□□□ 0.07
PTCH1-215ENST00000547672 ATRNL1Q5VV63 1379 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms