RNA–Protein interactions for RNA: ENST00000547515.1

LINC02409-201, Transcript of long intergenic non-protein coding RNA 2409, humanhuman

TSL 4 BASIC

Gene LINC02409, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02409-201ENST00000547515 RAB3GAP1Q15042 981 aa12.25□□□□□ -0.45
LINC02409-201ENST00000547515 ALX1Q15699 326 aa12.25□□□□□ -0.45
LINC02409-201ENST00000547515 TREML2Q5T2D2 321 aa12.25□□□□□ -0.45
LINC02409-201ENST00000547515 VPS53Q5VIR6 699 aa12.25□□□□□ -0.45
LINC02409-201ENST00000547515 CTU1Q7Z7A3 348 aaKnown RBP12.25□□□□□ -0.45
LINC02409-201ENST00000547515 PARK7Q99497 189 aaKnown RBP12.25□□□□□ -0.45
LINC02409-201ENST00000547515 NAPBQ9H115 298 aa12.25□□□□□ -0.45
LINC02409-201ENST00000547515 CCDC171Q6TFL3 1326 aa12.25□□□□□ -0.45
LINC02409-201ENST00000547515 KIAA0100Q14667 2235 aaKnown RBP12.25□□□□□ -0.45
LINC02409-201ENST00000547515 MPHOSPH10O00566 681 aaKnown RBP12.24□□□□□ -0.45
LINC02409-201ENST00000547515 ZMYM6O95789 1325 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 SP3Q02447 781 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 DGKZQ13574 1117 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 USP17L2Q6R6M4 530 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 C17orf99Q6UX52 265 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 ZNF589Q86UQ0 364 aaPredicted RBP12.24□□□□□ -0.45
LINC02409-201ENST00000547515 ACER1Q8TDN7 264 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 ERO1AQ96HE7 468 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 C12orf42Q96LP6 360 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 KIAA1683Q9H0B3 1180 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 DIAPH3Q9NSV4 1193 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 TMOD4Q9NZQ9 345 aa12.24□□□□□ -0.45
LINC02409-201ENST00000547515 COL11A1P12107 1806 aaPredicted RBP12.23□□□□□ -0.45
LINC02409-201ENST00000547515 CYP2C8P10632 490 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 HSPD1P10809 573 aaKnown RBP12.23□□□□□ -0.45
LINC02409-201ENST00000547515 BCRP11274 1271 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 RASA1P20936 1047 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
LINC02409-201ENST00000547515 USP14P54578 494 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 MFAP1P55081 439 aaKnown RBP12.23□□□□□ -0.45
LINC02409-201ENST00000547515 PPARAQ07869 468 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 PABPC4Q13310 644 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC02409-201ENST00000547515 CCDC136Q96JN2 1154 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 FEZ1Q99689 392 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 ZNF287Q9HBT7 754 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 EMILIN3Q9NT22 766 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 PNMA3Q9UL41 463 aa12.23□□□□□ -0.45
LINC02409-201ENST00000547515 ZNFX1Q9P2E3 1918 aaKnown RBP12.22□□□□□ -0.45
LINC02409-201ENST00000547515 A0A1W2PRG0 241 aa12.22□□□□□ -0.45
LINC02409-201ENST00000547515 FGAP02671 866 aa12.22□□□□□ -0.45
LINC02409-201ENST00000547515 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
LINC02409-201ENST00000547515 PKN2Q16513 984 aaKnown RBP12.22□□□□□ -0.45
LINC02409-201ENST00000547515 CWC27Q6UX04 472 aaKnown RBP12.22□□□□□ -0.45
LINC02409-201ENST00000547515 SIAH1Q8IUQ4 282 aa12.22□□□□□ -0.45
LINC02409-201ENST00000547515 CD99L2Q8TCZ2 262 aa12.22□□□□□ -0.45
LINC02409-201ENST00000547515 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC02409-201ENST00000547515 MCOLN1Q9GZU1 580 aa12.22□□□□□ -0.45
LINC02409-201ENST00000547515 MKNK2Q9HBH9 465 aa12.22□□□□□ -0.45
LINC02409-201ENST00000547515 CPA4Q9UI42 421 aa12.22□□□□□ -0.45
LINC02409-201ENST00000547515 ANAPC4Q9UJX5 808 aa12.22□□□□□ -0.45
LINC02409-201ENST00000547515 PLIN4Q96Q06 1357 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 A0A0G2JMZ2 1700 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 OSBPP22059 807 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 CAP1Q01518 475 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 ICA1Q05084 483 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 PDE4BQ07343 736 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 ERICH6BQ5W0A0 696 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 CLEC10AQ8IUN9 316 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 STK11IPQ8N1F8 1099 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 ASCC2Q9H1I8 757 aaPredicted RBP12.21□□□□□ -0.45
LINC02409-201ENST00000547515 KANSL2Q9H9L4 492 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 ARHGEF10LQ9HCE6 1279 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC02409-201ENST00000547515 TMX2Q9Y320 296 aa12.21□□□□□ -0.45
LINC02409-201ENST00000547515 PLXNB2O15031 1838 aa12.21□□□□□ -0.46
LINC02409-201ENST00000547515 RAD50Q92878 1312 aa12.2□□□□□ -0.46
LINC02409-201ENST00000547515 IGKV6D-41A0A0C4DH26 115 aa12.2□□□□□ -0.46
LINC02409-201ENST00000547515 FGRP09769 529 aa12.2□□□□□ -0.46
LINC02409-201ENST00000547515 VCAM1P19320 739 aa12.2□□□□□ -0.46
LINC02409-201ENST00000547515 CHMLP26374 656 aa12.2□□□□□ -0.46
LINC02409-201ENST00000547515 GCLCP48506 637 aaPredicted RBP12.2□□□□□ -0.46
LINC02409-201ENST00000547515 LACTBP83111 547 aaPredicted RBP12.2□□□□□ -0.46
LINC02409-201ENST00000547515 ZYXQ15942 572 aaKnown RBP12.2□□□□□ -0.46
LINC02409-201ENST00000547515 OTOP1Q7RTM1 612 aa12.2□□□□□ -0.46
LINC02409-201ENST00000547515 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
LINC02409-201ENST00000547515 SMCR8Q8TEV9 937 aaPredicted RBP12.2□□□□□ -0.46
LINC02409-201ENST00000547515 SH2D4AQ9H788 454 aa12.2□□□□□ -0.46
LINC02409-201ENST00000547515 USP17L15C9J2P7 530 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 USP17L13C9JLJ4 530 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 USP17L11C9JVI0 530 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 USP17L18D6R9N7 530 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 USP17L22D6RA61 530 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 USP17L17D6RBQ6 530 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 USP17L19D6RCP7 530 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 USP17L20D6RJB6 530 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 ORC4O43929 436 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 PRDM1O75626 825 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 EEF2P13639 858 aaKnown RBP12.19□□□□□ -0.46
LINC02409-201ENST00000547515 IRX3P78415 501 aaPredicted RBP12.19□□□□□ -0.46
LINC02409-201ENST00000547515 CTDSPL2Q05D32 466 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 USP17L24Q0WX57 530 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 KIF22Q14807 665 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 ARHGEF6Q15052 776 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 FAM110CQ1W6H9 321 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 FBXO46Q6PJ61 603 aaPredicted RBP12.19□□□□□ -0.46
LINC02409-201ENST00000547515 SKAP1Q86WV1 359 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 NEDD1Q8NHV4 660 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 ABHD8Q96I13 439 aa12.19□□□□□ -0.46
LINC02409-201ENST00000547515 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
LINC02409-201ENST00000547515 DSCC1Q9BVC3 393 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms