RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 FXR1P51114 621 aaKnown RBP eCLIP13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 GRIK3Q13003 919 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 MAATS1Q7Z4T9 603 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 NBPF5PQ86XG9 351 aaPredicted RBP13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 NUTM2AQ8IVF1 878 aaPredicted RBP13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 JAKMIP2Q96AA8 810 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 POLR3EQ9NVU0 708 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 TUBE1Q9UJT0 475 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 MROH7-TTC4A0A0A0MT08 1334 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 TMCO5BA8MYB1 307 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 HMGB1P09429 215 aaKnown RBP13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 RANBP1P43487 201 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 GUCY2FP51841 1108 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 BEND3Q5T5X7 828 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 WLSQ5T9L3 541 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 SLC9C2Q5TAH2 1124 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 MAEAQ7L5Y9 396 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 PICK1Q9NRD5 415 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 CARMIL3Q8ND23 1372 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 RIMBP3CA6NJZ7 1639 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 RIMBP3BA6NNM3 1639 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 RIMBP3Q9UFD9 1639 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 NBPF9Q3BBW0 867 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 USPL1Q5W0Q7 1092 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 FAM228AQ86W67 206 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 BORCS6Q96GS4 357 aa13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 CLTCQ00610 1675 aaKnown RBP13.38□□□□□ -0.27
RBFOX1-208ENST00000547372 ACEP12821 1306 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 LGR5O75473 907 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 RASSF9O75901 435 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 BMP6P22004 513 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 CXCR5P32302 372 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 USP4Q13107 963 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 MCMDC2Q4G0Z9 681 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 TTMPQ5BVD1 217 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 NLRP14Q86W24 1093 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 SMYD4Q8IYR2 804 aaPredicted RBP13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 TATDN2Q93075 761 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 KCNH3Q9ULD8 1083 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 A0A0G2JLW4 131 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 N4BP3O15049 544 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 C3orf20Q8ND61 904 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 AIFM3Q96NN9 605 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 MYD88Q99836 296 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 SMARCAL1Q9NZC9 954 aa13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 DMGDHQ9UI17 866 aaKnown RBP13.37□□□□□ -0.27
RBFOX1-208ENST00000547372 ATP5J2-PTCD1G3V325 749 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 ZPR1O75312 459 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 PYGLP06737 847 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 SLC8A1P32418 973 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 KCTD19Q17RG1 926 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 NBPF10Q6P3W6 841 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 STOX1Q6ZVD7 989 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 METTL16Q86W50 562 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 CHP1Q99653 195 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 DACH1Q9UI36 760 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 FAM184BQ9ULE4 1060 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 PXDNLA1KZ92 1463 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 IDEP14735 1019 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 KRT9P35527 623 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 CFAP58Q5T655 872 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 MEX3CQ5U5Q3 659 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 LRRC1Q9BTT6 524 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 EPN3Q9H201 632 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 KIF28PB7ZC32 967 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 POLR2DO15514 142 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 SASH1O94885 1247 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 SPRED3Q2MJR0 410 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 TRIM68Q6AZZ1 485 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 SHC4Q6S5L8 630 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 PROSER2Q86WR7 435 aaPredicted RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 TSEN2Q8NCE0 465 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 CCDC43Q96MW1 224 aaKnown RBP13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 SPAG5Q96R06 1193 aa13.36□□□□□ -0.27
RBFOX1-208ENST00000547372 DNM1LO00429 736 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 CASP1P29466 404 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 UBE3BQ7Z3V4 1068 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 ITFG2Q969R8 447 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 PANX2Q96RD6 677 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 PAIP2Q9BPZ3 127 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 CRYBG1Q9Y4K1 1723 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 ESYT3A0FGR9 886 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 GRM8O00222 908 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 PDIA3P30101 505 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 IMMTQ16891 758 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 CCDC50Q8IVM0 306 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 MYCBPAPQ8TBZ2 947 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 XAGE2Q96GT9 111 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 ALG1Q9BT22 464 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 WWC3Q9ULE0 1092 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 SBNO1A3KN83 1393 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 CPS1P31327 1500 aa13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 ZC3H4Q9UPT8 1303 aaKnown RBP13.35□□□□□ -0.27
RBFOX1-208ENST00000547372 FDPSP14324 419 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms