RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 SLC44A5Q8NCS7 719 aa30.23■■■□□ 2.43
NKX2-1-205ENST00000546983 BAZ2AQ9UIF9 1905 aaKnown RBP30.22■■■□□ 2.43
NKX2-1-205ENST00000546983 FKTNO75072 461 aa30.22■■■□□ 2.43
NKX2-1-205ENST00000546983 OSBPP22059 807 aa30.22■■■□□ 2.43
NKX2-1-205ENST00000546983 HMGCS2P54868 508 aa30.22■■■□□ 2.43
NKX2-1-205ENST00000546983 C12orf42Q96LP6 360 aa30.22■■■□□ 2.43
NKX2-1-205ENST00000546983 RNF41Q9H4P4 317 aaPredicted RBP30.22■■■□□ 2.43
NKX2-1-205ENST00000546983 TSKSQ9UJT2 592 aa30.22■■■□□ 2.43
NKX2-1-205ENST00000546983 ATAD5Q96QE3 1844 aa30.22■■■□□ 2.43
NKX2-1-205ENST00000546983 ICA1Q05084 483 aa30.21■■■□□ 2.43
NKX2-1-205ENST00000546983 SEPT2Q15019 361 aa30.21■■■□□ 2.43
NKX2-1-205ENST00000546983 VPS53Q5VIR6 699 aa30.21■■■□□ 2.43
NKX2-1-205ENST00000546983 GPAT2Q6NUI2 795 aa30.21■■■□□ 2.43
NKX2-1-205ENST00000546983 SYNPO2Q9UMS6 1093 aa30.21■■■□□ 2.43
NKX2-1-205ENST00000546983 RASA1P20936 1047 aa30.2■■■□□ 2.43
NKX2-1-205ENST00000546983 JAG1P78504 1218 aa30.2■■■□□ 2.43
NKX2-1-205ENST00000546983 CCDC84Q86UT8 332 aaPredicted RBP30.2■■■□□ 2.43
NKX2-1-205ENST00000546983 GTF3C2Q8WUA4 911 aaPredicted RBP30.2■■■□□ 2.43
NKX2-1-205ENST00000546983 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.2■■■□□ 2.43
NKX2-1-205ENST00000546983 FOXP2O15409 715 aa30.19■■■□□ 2.42
NKX2-1-205ENST00000546983 AKR1B1P15121 316 aa30.19■■■□□ 2.42
NKX2-1-205ENST00000546983 HOXA7P31268 230 aaPredicted RBP30.19■■■□□ 2.42
NKX2-1-205ENST00000546983 LPAR1Q92633 364 aa30.19■■■□□ 2.42
NKX2-1-205ENST00000546983 ERO1AQ96HE7 468 aa30.19■■■□□ 2.42
NKX2-1-205ENST00000546983 ZNF213O14771 459 aa30.18■■■□□ 2.42
NKX2-1-205ENST00000546983 GUCY1A2P33402 732 aa30.18■■■□□ 2.42
NKX2-1-205ENST00000546983 EVX2Q03828 476 aa30.18■■■□□ 2.42
NKX2-1-205ENST00000546983 ORC4O43929 436 aa30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 FGRP09769 529 aa30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 TSPY3P0CV98 308 aa30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 TSPY8P0CW00 308 aa30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 GCLCP48506 637 aaPredicted RBP30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 SP3Q02447 781 aa30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 KIF22Q14807 665 aa30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 IMMTQ16891 758 aaKnown RBP30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 KIAA1211Q6ZU35 1233 aa30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 SMCR8Q8TEV9 937 aaPredicted RBP30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 ZNF296Q8WUU4 475 aaPredicted RBP30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 TMX2Q9Y320 296 aa30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 PHIPQ8WWQ0 1821 aa30.17■■■□□ 2.42
NKX2-1-205ENST00000546983 IRX3P78415 501 aaPredicted RBP30.16■■■□□ 2.42
NKX2-1-205ENST00000546983 NYAP2Q9P242 653 aa30.16■■■□□ 2.42
NKX2-1-205ENST00000546983 PLIN4Q96Q06 1357 aa30.15■■■□□ 2.42
NKX2-1-205ENST00000546983 SGSM2O43147 1006 aa30.15■■■□□ 2.42
NKX2-1-205ENST00000546983 PKN2Q16513 984 aaKnown RBP30.15■■■□□ 2.42
NKX2-1-205ENST00000546983 MFSD6Q6ZSS7 791 aa30.15■■■□□ 2.42
NKX2-1-205ENST00000546983 NEDD1Q8NHV4 660 aa30.15■■■□□ 2.42
NKX2-1-205ENST00000546983 GOPCQ9HD26 462 aa30.15■■■□□ 2.42
NKX2-1-205ENST00000546983 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.15■■■□□ 2.42
NKX2-1-205ENST00000546983 TSPY2A6NKD2 308 aa30.14■■■□□ 2.42
NKX2-1-205ENST00000546983 SHROOM1Q2M3G4 852 aaPredicted RBP30.14■■■□□ 2.42
NKX2-1-205ENST00000546983 USP17L15C9J2P7 530 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 USP17L13C9JLJ4 530 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 USP17L11C9JVI0 530 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 USP17L18D6R9N7 530 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 USP17L22D6RA61 530 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 USP17L17D6RBQ6 530 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 USP17L19D6RCP7 530 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 USP17L20D6RJB6 530 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 GNRH1P01148 92 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 USP17L24Q0WX57 530 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 AKNAD1Q5T1N1 836 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 STAG1Q8WVM7 1258 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 EMILIN3Q9NT22 766 aa30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 U3KPZ7 1027 aaPredicted RBP30.13■■■□□ 2.41
NKX2-1-205ENST00000546983 C17orf99Q6UX52 265 aa30.12■■■□□ 2.41
NKX2-1-205ENST00000546983 CTU1Q7Z7A3 348 aaKnown RBP30.12■■■□□ 2.41
NKX2-1-205ENST00000546983 MYH8P13535 1937 aa30.12■■■□□ 2.41
NKX2-1-205ENST00000546983 SMIM22K7EJ46 135 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 TTLL1O95922 423 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 EEF2P13639 858 aaKnown RBP30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 TFAP4Q01664 338 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 CTDSPL2Q05D32 466 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 CCDC178Q5BJE1 867 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 TREML2Q5T2D2 321 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 STK11IPQ8N1F8 1099 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 ACER1Q8TDN7 264 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 ASCC2Q9H1I8 757 aaPredicted RBP30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 VCPKMTQ9H867 229 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 CNNM2Q9H8M5 875 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 TOMM22Q9NS69 142 aa30.11■■■□□ 2.41
NKX2-1-205ENST00000546983 LOC285556D6RIA3 1793 aa30.1■■■□□ 2.41
NKX2-1-205ENST00000546983 CDC45O75419 566 aa30.1■■■□□ 2.41
NKX2-1-205ENST00000546983 PRDM1O75626 825 aa30.1■■■□□ 2.41
NKX2-1-205ENST00000546983 ESR2Q92731 530 aa30.1■■■□□ 2.41
NKX2-1-205ENST00000546983 MKL1Q969V6 931 aa30.1■■■□□ 2.41
NKX2-1-205ENST00000546983 MTMR4Q9NYA4 1195 aa30.1■■■□□ 2.41
NKX2-1-205ENST00000546983 PTPRFP10586 1907 aa30.1■■■□□ 2.41
NKX2-1-205ENST00000546983 IGKV6D-41A0A0C4DH26 115 aa30.09■■■□□ 2.41
NKX2-1-205ENST00000546983 RANBP6O60518 1105 aaKnown RBP30.09■■■□□ 2.41
NKX2-1-205ENST00000546983 VCAM1P19320 739 aa30.09■■■□□ 2.41
NKX2-1-205ENST00000546983 ADGRA2Q96PE1 1338 aa30.09■■■□□ 2.41
NKX2-1-205ENST00000546983 R3HDMLQ9H3Y0 253 aa30.09■■■□□ 2.41
NKX2-1-205ENST00000546983 WDR46O15213 610 aaKnown RBP30.08■■■□□ 2.41
NKX2-1-205ENST00000546983 CYP2C8P10632 490 aa30.08■■■□□ 2.41
NKX2-1-205ENST00000546983 ATP2B2Q01814 1243 aa30.08■■■□□ 2.41
NKX2-1-205ENST00000546983 ZYXQ15942 572 aaKnown RBP30.08■■■□□ 2.41
NKX2-1-205ENST00000546983 FAM110CQ1W6H9 321 aa30.08■■■□□ 2.41
NKX2-1-205ENST00000546983 COL13A1Q5TAT6 717 aaPredicted RBP30.08■■■□□ 2.41
NKX2-1-205ENST00000546983 KRT23Q9C075 422 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms