RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 GPR75-ASB3A0A0A6YYF3 556 aa16.12■□□□□ 0.17
RAB5B-203ENST00000546810 SLURP2P0DP57 97 aa16.12■□□□□ 0.17
RAB5B-203ENST00000546810 PLCG2P16885 1265 aa16.12■□□□□ 0.17
RAB5B-203ENST00000546810 BTDP43251 543 aa16.12■□□□□ 0.17
RAB5B-203ENST00000546810 KBTBD3Q8NAB2 608 aa16.12■□□□□ 0.17
RAB5B-203ENST00000546810 EDC3Q96F86 508 aaKnown RBP16.12■□□□□ 0.17
RAB5B-203ENST00000546810 PTPRFP10586 1907 aa16.11■□□□□ 0.17
RAB5B-203ENST00000546810 DDTLA6NHG4 134 aaPredicted RBP16.11■□□□□ 0.17
RAB5B-203ENST00000546810 ZFYP08048 801 aaPredicted RBP16.11■□□□□ 0.17
RAB5B-203ENST00000546810 PABPC4Q13310 644 aaKnown RBP eCLIP16.11■□□□□ 0.17
RAB5B-203ENST00000546810 EVI5LQ96CN4 794 aa16.11■□□□□ 0.17
RAB5B-203ENST00000546810 SEMA6BQ9H3T3 888 aa16.11■□□□□ 0.17
RAB5B-203ENST00000546810 DOCK2Q92608 1830 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 XRCC5P13010 732 aaKnown RBP16.1■□□□□ 0.17
RAB5B-203ENST00000546810 PDE6AP16499 860 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 PDE4AP27815 886 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 CACNB2Q08289 660 aaPredicted RBP16.1■□□□□ 0.17
RAB5B-203ENST00000546810 SPP2Q13103 211 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 LHX8Q68G74 356 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 ZNF384Q8TF68 577 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 NUDT12Q9BQG2 462 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 FSD1Q9BTV5 496 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 ASCC2Q9H1I8 757 aaPredicted RBP16.1■□□□□ 0.17
RAB5B-203ENST00000546810 MORF4L1Q9UBU8 362 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 DOCK1Q14185 1865 aa16.1■□□□□ 0.17
RAB5B-203ENST00000546810 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
RAB5B-203ENST00000546810 ADD2P35612 726 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 HMGCS2P54868 508 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 PPP4CP60510 307 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 TICAM2Q86XR7 235 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 TRMT44Q8IYL2 757 aaKnown RBP16.09■□□□□ 0.17
RAB5B-203ENST00000546810 SOCS4Q8WXH5 440 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 MYLIPQ8WY64 445 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 AATFQ9NY61 560 aaKnown RBP eCLIP16.09■□□□□ 0.17
RAB5B-203ENST00000546810 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 ZNF532Q9HCE3 1301 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 RFX7Q2KHR2 1363 aa16.09■□□□□ 0.17
RAB5B-203ENST00000546810 EYSQ5T1H1 3165 aa16.08■□□□□ 0.17
RAB5B-203ENST00000546810 CCND3P30281 292 aaPredicted RBP16.08■□□□□ 0.16
RAB5B-203ENST00000546810 ZNF280CQ8ND82 737 aa16.08■□□□□ 0.16
RAB5B-203ENST00000546810 RILPL2Q969X0 211 aa16.08■□□□□ 0.16
RAB5B-203ENST00000546810 DDX4Q9NQI0 724 aaKnown RBP16.08■□□□□ 0.16
RAB5B-203ENST00000546810 MAGEB6P1A0A0J9YX57 407 aa16.07■□□□□ 0.16
RAB5B-203ENST00000546810 RNF113AO15541 343 aaKnown RBP16.07■□□□□ 0.16
RAB5B-203ENST00000546810 FOSL2P15408 326 aa16.07■□□□□ 0.16
RAB5B-203ENST00000546810 PICALMQ13492 652 aa16.07■□□□□ 0.16
RAB5B-203ENST00000546810 TEX11Q8IYF3 940 aa16.07■□□□□ 0.16
RAB5B-203ENST00000546810 MIGA1Q8NAN2 632 aa16.07■□□□□ 0.16
RAB5B-203ENST00000546810 TBC1D2Q9BYX2 928 aa16.07■□□□□ 0.16
RAB5B-203ENST00000546810 SENP6Q9GZR1 1112 aaPredicted RBP16.07■□□□□ 0.16
RAB5B-203ENST00000546810 PRKAG2Q9UGJ0 569 aa16.07■□□□□ 0.16
RAB5B-203ENST00000546810 PLXNB2O15031 1838 aa16.07■□□□□ 0.16
RAB5B-203ENST00000546810 TCRBV5S4A2TA0A5A2 114 aa16.06■□□□□ 0.16
RAB5B-203ENST00000546810 TBC1D12O60347 775 aa16.06■□□□□ 0.16
RAB5B-203ENST00000546810 SHHQ15465 462 aa16.06■□□□□ 0.16
RAB5B-203ENST00000546810 TTC22Q5TAA0 569 aa16.06■□□□□ 0.16
RAB5B-203ENST00000546810 ADGRA1Q86SQ6 560 aa16.06■□□□□ 0.16
RAB5B-203ENST00000546810 OSBPL5Q9H0X9 879 aaPredicted RBP16.06■□□□□ 0.16
RAB5B-203ENST00000546810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.06■□□□□ 0.16
RAB5B-203ENST00000546810 LOC285556D6RIA3 1793 aa16.05■□□□□ 0.16
RAB5B-203ENST00000546810 MAST2Q6P0Q8 1798 aa16.05■□□□□ 0.16
RAB5B-203ENST00000546810 TTC28Q96AY4 2481 aa16.05■□□□□ 0.16
RAB5B-203ENST00000546810 FAM196BA6NMK8 535 aa16.05■□□□□ 0.16
RAB5B-203ENST00000546810 TNFRSF10AO00220 468 aa16.05■□□□□ 0.16
RAB5B-203ENST00000546810 NPM3O75607 178 aaKnown RBP16.05■□□□□ 0.16
RAB5B-203ENST00000546810 RHBDL3P58872 404 aa16.05■□□□□ 0.16
RAB5B-203ENST00000546810 IRX3P78415 501 aaPredicted RBP16.05■□□□□ 0.16
RAB5B-203ENST00000546810 SH3D19Q5HYK7 790 aa16.05■□□□□ 0.16
RAB5B-203ENST00000546810 GPRC5AQ8NFJ5 357 aa16.05■□□□□ 0.16
RAB5B-203ENST00000546810 SH3RF3Q8TEJ3 882 aaPredicted RBP16.05■□□□□ 0.16
RAB5B-203ENST00000546810 APPBP2Q92624 585 aa16.05■□□□□ 0.16
RAB5B-203ENST00000546810 CRNKL1Q9BZJ0 848 aaKnown RBP16.05■□□□□ 0.16
RAB5B-203ENST00000546810 TTYH1Q9H313 450 aaPredicted RBP16.05■□□□□ 0.16
RAB5B-203ENST00000546810 LAMA2P24043 3122 aaKnown RBP16.05■□□□□ 0.16
RAB5B-203ENST00000546810 HIP1O00291 1037 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 PEX10O60683 326 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 MAPK4P31152 587 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 RGS2P41220 211 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 USP5P45974 858 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 ATN1P54259 1190 aaPredicted RBP16.04■□□□□ 0.16
RAB5B-203ENST00000546810 DYNLL1P63167 89 aaKnown RBP16.04■□□□□ 0.16
RAB5B-203ENST00000546810 CCL14Q16627 93 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 TJAP1Q5JTD0 557 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 USP6NLQ92738 828 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 TXNRD2Q9NNW7 524 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 RAPGEFL1Q9UHV5 662 aa16.04■□□□□ 0.16
RAB5B-203ENST00000546810 USP17L5A8MUK1 530 aa16.03■□□□□ 0.16
RAB5B-203ENST00000546810 SMAD3P84022 425 aaKnown RBP16.03■□□□□ 0.16
RAB5B-203ENST00000546810 C9orf50Q5SZB4 431 aa16.03■□□□□ 0.16
RAB5B-203ENST00000546810 P2RX7Q99572 595 aaKnown RBP16.03■□□□□ 0.16
RAB5B-203ENST00000546810 APBA2Q99767 749 aa16.03■□□□□ 0.16
RAB5B-203ENST00000546810 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
RAB5B-203ENST00000546810 AS3MTQ9HBK9 375 aa16.03■□□□□ 0.16
RAB5B-203ENST00000546810 PRUNE2Q8WUY3 3088 aa16.03■□□□□ 0.16
RAB5B-203ENST00000546810 MBD4O95243 580 aa16.02■□□□□ 0.16
RAB5B-203ENST00000546810 CAP2P40123 477 aa16.02■□□□□ 0.16
RAB5B-203ENST00000546810 RTP1P59025 263 aa16.02■□□□□ 0.16
RAB5B-203ENST00000546810 HERVK_113P62684 666 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms