RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 CTNNA1P35221 906 aaKnown RBP14.22□□□□□ -0.13
PTCH1-212ENST00000546744 ANKRD20A3Q5VUR7 823 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 CCDC65Q8IXS2 484 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 IFIH1Q9BYX4 1025 aaKnown RBP14.22□□□□□ -0.13
PTCH1-212ENST00000546744 PRR36Q9H6K5 1346 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 ATP7BP35670 1465 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 FAM83GA6ND36 823 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 TRIM37O94972 964 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 RAB3IL1Q8TBN0 382 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.22□□□□□ -0.13
PTCH1-212ENST00000546744 SLF1Q9BQI6 1058 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 GSTA5Q7RTV2 222 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 CCDC144CPQ8IYA2 1237 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 ADAM21Q9UKJ8 722 aa14.22□□□□□ -0.13
PTCH1-212ENST00000546744 IFT172Q9UG01 1749 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 NPHP4O75161 1426 aaPredicted RBP14.21□□□□□ -0.13
PTCH1-212ENST00000546744 ST5P78524 1137 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 RAD51AP2Q09MP3 1159 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 ATP2B3Q16720 1220 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 NBPF10Q6P3W6 841 aaKnown RBP14.21□□□□□ -0.13
PTCH1-212ENST00000546744 DSCC1Q9BVC3 393 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 PPANQ9NQ55 473 aaKnown RBP14.21□□□□□ -0.13
PTCH1-212ENST00000546744 STAP2Q9UGK3 403 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 CTNND2Q9UQB3 1225 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 H7C1D1 291 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 NR1I2O75469 434 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 LGSNQ5TDP6 509 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 SPATA1Q5VX52 437 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 EMBQ6PCB8 327 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 PAF1Q8N7H5 531 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 TSPYL6Q8N831 410 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 CDC5LQ99459 802 aaKnown RBP14.21□□□□□ -0.13
PTCH1-212ENST00000546744 ERBB4Q15303 1308 aa14.21□□□□□ -0.13
PTCH1-212ENST00000546744 DNAJC8O75937 253 aaPredicted RBP14.21□□□□□ -0.14
PTCH1-212ENST00000546744 SV2BQ7L1I2 683 aa14.21□□□□□ -0.14
PTCH1-212ENST00000546744 ADAMTS13Q76LX8 1427 aa14.21□□□□□ -0.14
PTCH1-212ENST00000546744 POLR2DO15514 142 aaKnown RBP14.2□□□□□ -0.14
PTCH1-212ENST00000546744 CCDC14Q49A88 953 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 RPUSD2Q8IZ73 545 aaKnown RBP14.2□□□□□ -0.14
PTCH1-212ENST00000546744 CNKSR2Q8WXI2 1034 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 TUBB6Q9BUF5 446 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 DLC1Q96QB1 1528 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 GNA14O95837 355 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 GSPT1P15170 499 aaKnown RBP14.2□□□□□ -0.14
PTCH1-212ENST00000546744 ASIC2Q16515 512 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 MSANTD4Q8NCY6 345 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 C19orf44Q9H6X5 657 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 RIMS1Q86UR5 1692 aaKnown RBP14.2□□□□□ -0.14
PTCH1-212ENST00000546744 CCDC152Q4G0S7 254 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 LRRC23Q53EV4 343 aaPredicted RBP14.2□□□□□ -0.14
PTCH1-212ENST00000546744 HHATQ5VTY9 493 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 SEPT14Q6ZU15 432 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 CCDC25Q86WR0 208 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 CCDC170Q8IYT3 715 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 BICD1Q96G01 975 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 SMIM24O75264 130 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 GAS8O95995 478 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 SAAL1Q96ER3 474 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
PTCH1-212ENST00000546744 PFKFB2O60825 505 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 PPFIA2O75334 1257 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 ZC3H6P61129 1189 aaKnown RBP14.19□□□□□ -0.14
PTCH1-212ENST00000546744 PPP2R5AQ15172 486 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 PARD6BQ9BYG5 372 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 EPN1Q9Y6I3 576 aaPredicted RBP14.19□□□□□ -0.14
PTCH1-212ENST00000546744 SMIM23A6NLE4 172 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 CHL1O00533 1208 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 RAPGEF1Q13905 1077 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 INF2Q27J81 1249 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 RASIP1Q5U651 963 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 CADPS2Q86UW7 1296 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 BATF3Q9NR55 127 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 EIF3CLB5ME19 914 aaKnown RBP14.19□□□□□ -0.14
PTCH1-212ENST00000546744 CEP104O60308 925 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 STX2P32856 288 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 MUM1L1Q5H9M0 696 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 KRT28Q7Z3Y7 464 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 EIF3CQ99613 913 aaKnown RBP14.19□□□□□ -0.14
PTCH1-212ENST00000546744 YY1AP1Q9H869 796 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 PSD3Q9NYI0 1048 aa14.19□□□□□ -0.14
PTCH1-212ENST00000546744 FLT4P35916 1363 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 HMGB1P1B2RPK0 211 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-212ENST00000546744 GSTO1P78417 241 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 DRP2Q13474 957 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 CASP8Q14790 479 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 FAM173BQ6P4H8 233 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 DIS3L2Q8IYB7 885 aaKnown RBP14.18□□□□□ -0.14
PTCH1-212ENST00000546744 KBTBD3Q8NAB2 608 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 WHAMMQ8TF30 809 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 GLT8D2Q9H1C3 349 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 CHPF2Q9P2E5 772 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 SKIP12755 728 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 PFKFB1P16118 471 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 IRX1P78414 480 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-212ENST00000546744 ME3Q16798 604 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 N4BP2L2Q92802 583 aaPredicted RBP14.18□□□□□ -0.14
PTCH1-212ENST00000546744 NOP53Q9NZM5 478 aaKnown RBP14.18□□□□□ -0.14
PTCH1-212ENST00000546744 ZNF131P52739 623 aa14.18□□□□□ -0.14
PTCH1-212ENST00000546744 EIF3BP55884 814 aaKnown RBP14.18□□□□□ -0.14
PTCH1-212ENST00000546744 CFAP157Q5JU67 520 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms