RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 PAGR1Q9BTK6 254 aa22.66■■□□□ 1.22
CHPT1-202ENST00000546490 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.66■■□□□ 1.22
CHPT1-202ENST00000546490 KIAA1683Q9H0B3 1180 aa22.66■■□□□ 1.22
CHPT1-202ENST00000546490 A0A0G2JMZ2 1700 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 USP17L15C9J2P7 530 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 USP17L13C9JLJ4 530 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 USP17L11C9JVI0 530 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 USP17L18D6R9N7 530 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 USP17L22D6RA61 530 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 USP17L17D6RBQ6 530 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 USP17L19D6RCP7 530 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 USP17L20D6RJB6 530 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 ATP5JP18859 108 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 USP17L24Q0WX57 530 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 LCORLQ8N3X6 602 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 SDR42E1Q8WUS8 393 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 EDC3Q96F86 508 aaKnown RBP22.65■■□□□ 1.22
CHPT1-202ENST00000546490 NUDT12Q9BQG2 462 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 RBPJLQ9UBG7 517 aa22.65■■□□□ 1.22
CHPT1-202ENST00000546490 PEX10O60683 326 aa22.64■■□□□ 1.21
CHPT1-202ENST00000546490 VCAM1P19320 739 aa22.64■■□□□ 1.21
CHPT1-202ENST00000546490 GABPAQ06546 454 aa22.64■■□□□ 1.21
CHPT1-202ENST00000546490 LRRCC1Q9C099 1032 aa22.64■■□□□ 1.21
CHPT1-202ENST00000546490 CRISPLD2Q9H0B8 497 aa22.64■■□□□ 1.21
CHPT1-202ENST00000546490 BOLA2Q9H3K6 86 aa22.64■■□□□ 1.21
CHPT1-202ENST00000546490 DCP1AQ9NPI6 582 aaPredicted RBP22.64■■□□□ 1.21
CHPT1-202ENST00000546490 COLQQ9Y215 455 aaPredicted RBP22.64■■□□□ 1.21
CHPT1-202ENST00000546490 RPTORQ8N122 1335 aa22.63■■□□□ 1.21
CHPT1-202ENST00000546490 CYP2B6P20813 491 aa22.63■■□□□ 1.21
CHPT1-202ENST00000546490 ADD2P35612 726 aa22.63■■□□□ 1.21
CHPT1-202ENST00000546490 TRIB2Q92519 343 aa22.63■■□□□ 1.21
CHPT1-202ENST00000546490 HAUS7Q99871 368 aa22.63■■□□□ 1.21
CHPT1-202ENST00000546490 ARMT1Q9H993 441 aa22.63■■□□□ 1.21
CHPT1-202ENST00000546490 CWC22Q9HCG8 908 aaKnown RBP22.63■■□□□ 1.21
CHPT1-202ENST00000546490 HMX1Q9NP08 348 aaPredicted RBP22.63■■□□□ 1.21
CHPT1-202ENST00000546490 PARP14Q460N5 1801 aa22.63■■□□□ 1.21
CHPT1-202ENST00000546490 MPHOSPH10O00566 681 aaKnown RBP22.62■■□□□ 1.21
CHPT1-202ENST00000546490 MBD4O95243 580 aa22.62■■□□□ 1.21
CHPT1-202ENST00000546490 XRCC5P13010 732 aaKnown RBP22.62■■□□□ 1.21
CHPT1-202ENST00000546490 CCNA1P78396 465 aa22.62■■□□□ 1.21
CHPT1-202ENST00000546490 C20orf194Q5TEA3 1177 aa22.62■■□□□ 1.21
CHPT1-202ENST00000546490 GPR142Q7Z601 462 aa22.62■■□□□ 1.21
CHPT1-202ENST00000546490 TRMT44Q8IYL2 757 aaKnown RBP22.62■■□□□ 1.21
CHPT1-202ENST00000546490 ACER1Q8TDN7 264 aa22.62■■□□□ 1.21
CHPT1-202ENST00000546490 PORCNQ9H237 461 aa22.62■■□□□ 1.21
CHPT1-202ENST00000546490 RABGAP1Q9Y3P9 1069 aa22.62■■□□□ 1.21
CHPT1-202ENST00000546490 NR2E3Q9Y5X4 410 aa22.62■■□□□ 1.21
CHPT1-202ENST00000546490 ZNF236Q9UL36 1845 aa22.61■■□□□ 1.21
CHPT1-202ENST00000546490 RLFQ13129 1914 aa22.61■■□□□ 1.21
CHPT1-202ENST00000546490 ZKSCAN1P17029 563 aaPredicted RBP22.61■■□□□ 1.21
CHPT1-202ENST00000546490 SEPT2Q15019 361 aa22.61■■□□□ 1.21
CHPT1-202ENST00000546490 ANKLE1Q8NAG6 615 aa22.61■■□□□ 1.21
CHPT1-202ENST00000546490 ATP8A2Q9NTI2 1148 aa22.61■■□□□ 1.21
CHPT1-202ENST00000546490 SWAP70Q9UH65 585 aa22.61■■□□□ 1.21
CHPT1-202ENST00000546490 TRIOBPQ9H2D6 2365 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 GUCY1A2P33402 732 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 RGS2P41220 211 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 TRIM32Q13049 653 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 Q3C1V9 767 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 CHRDL2Q6WN34 429 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 CATSPERGQ6ZRH7 1159 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 PLEKHH3Q7Z736 793 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 AMOTL1Q8IY63 956 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 APBA2Q99767 749 aa22.6■■□□□ 1.21
CHPT1-202ENST00000546490 RPAP3Q9H6T3 665 aaPredicted RBP22.6■■□□□ 1.21
CHPT1-202ENST00000546490 GLRX3O76003 335 aaKnown RBP22.59■■□□□ 1.21
CHPT1-202ENST00000546490 PRKAR2AP13861 404 aaKnown RBP22.59■■□□□ 1.21
CHPT1-202ENST00000546490 FXR1P51114 621 aaKnown RBP eCLIP22.59■■□□□ 1.21
CHPT1-202ENST00000546490 EVX2Q03828 476 aa22.59■■□□□ 1.21
CHPT1-202ENST00000546490 MAP3K21Q5TCX8 1036 aa22.59■■□□□ 1.21
CHPT1-202ENST00000546490 ZSCAN25Q6NSZ9 544 aa22.59■■□□□ 1.21
CHPT1-202ENST00000546490 LBX2Q6XYB7 198 aa22.59■■□□□ 1.21
CHPT1-202ENST00000546490 TMEM179Q6ZVK1 233 aa22.59■■□□□ 1.21
CHPT1-202ENST00000546490 DDRGK1Q96HY6 314 aa22.59■■□□□ 1.21
CHPT1-202ENST00000546490 CYP2D6P10635 497 aa22.58■■□□□ 1.21
CHPT1-202ENST00000546490 UBE3CQ15386 1083 aa22.58■■□□□ 1.21
CHPT1-202ENST00000546490 MORN1Q5T089 497 aa22.58■■□□□ 1.21
CHPT1-202ENST00000546490 POTEEQ6S8J3 1075 aa22.58■■□□□ 1.21
CHPT1-202ENST00000546490 NECAB2Q7Z6G3 386 aa22.58■■□□□ 1.21
CHPT1-202ENST00000546490 SLC44A5Q8NCS7 719 aa22.58■■□□□ 1.21
CHPT1-202ENST00000546490 PAWRQ96IZ0 340 aaKnown RBP22.58■■□□□ 1.21
CHPT1-202ENST00000546490 RANBP2P49792 3224 aaKnown RBP22.58■■□□□ 1.2
CHPT1-202ENST00000546490 SPDYE16A6NNV3 312 aaPredicted RBP22.57■■□□□ 1.2
CHPT1-202ENST00000546490 EVI5O60447 810 aa22.57■■□□□ 1.2
CHPT1-202ENST00000546490 CNMDO75829 334 aa22.57■■□□□ 1.2
CHPT1-202ENST00000546490 SLFNL1Q499Z3 407 aa22.57■■□□□ 1.2
CHPT1-202ENST00000546490 WDR78Q5VTH9 848 aa22.57■■□□□ 1.2
CHPT1-202ENST00000546490 USP6NLQ92738 828 aa22.57■■□□□ 1.2
CHPT1-202ENST00000546490 COL11A1P12107 1806 aaPredicted RBP22.57■■□□□ 1.2
CHPT1-202ENST00000546490 PRKAB2O43741 272 aa22.56■■□□□ 1.2
CHPT1-202ENST00000546490 SMARCA5O60264 1052 aaPredicted RBP22.56■■□□□ 1.2
CHPT1-202ENST00000546490 DIS3LQ8TF46 1054 aaKnown RBP22.56■■□□□ 1.2
CHPT1-202ENST00000546490 DYNLL2Q96FJ2 89 aa22.56■■□□□ 1.2
CHPT1-202ENST00000546490 GPATCH3Q96I76 525 aa22.56■■□□□ 1.2
CHPT1-202ENST00000546490 SH2D4AQ9H788 454 aa22.56■■□□□ 1.2
CHPT1-202ENST00000546490 IVNS1ABPQ9Y6Y0 642 aa22.56■■□□□ 1.2
CHPT1-202ENST00000546490 GREB1LQ9C091 1923 aaPredicted RBP22.56■■□□□ 1.2
CHPT1-202ENST00000546490 A0A1W2PRG0 241 aa22.55■■□□□ 1.2
CHPT1-202ENST00000546490 MAP2K5Q13163 448 aa22.55■■□□□ 1.2
CHPT1-202ENST00000546490 TANGO6Q9C0B7 1094 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms