RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 SYCP3Q8IZU3 236 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 PI4KAP1Q8N8J0 262 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 KLHL23Q8NBE8 558 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 CYFIP2Q96F07 1278 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 EPB41L5Q9HCM4 733 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 SWAP70Q9UH65 585 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 NUP153P49790 1475 aaKnown RBP11.54□□□□□ -0.56
SOD2-216ENST00000546260 ESYT3A0FGR9 886 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 CCDC160A6NGH7 325 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 MRPL12P52815 198 aaKnown RBP11.54□□□□□ -0.56
SOD2-216ENST00000546260 ARMCX6Q7L4S7 300 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 PROSER2Q86WR7 435 aaPredicted RBP11.54□□□□□ -0.56
SOD2-216ENST00000546260 KLHL29Q96CT2 875 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 ATP10DQ9P241 1426 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 A0A0G2JS52 829 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 RASSF10A6NK89 507 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 CDKL5O76039 1030 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 PYGLP06737 847 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 TPP2P29144 1249 aaPredicted RBP11.54□□□□□ -0.56
SOD2-216ENST00000546260 SLMAPQ14BN4 828 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 PTGISQ16647 500 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 MUM1Q2TAK8 710 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 RUFY4Q6ZNE9 571 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 MAEAQ7L5Y9 396 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 RNF10Q8N5U6 811 aaKnown RBP11.54□□□□□ -0.56
SOD2-216ENST00000546260 STAMQ92783 540 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 CEP131Q9UPN4 1083 aa11.54□□□□□ -0.56
SOD2-216ENST00000546260 MFAP3LO75121 409 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 UPP2O95045 317 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 USP4Q13107 963 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 NCAPHQ15003 741 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 KIAA0825Q8IV33 1275 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 ABTB1Q969K4 478 aaPredicted RBP11.53□□□□□ -0.56
SOD2-216ENST00000546260 TANGO6Q9C0B7 1094 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
SOD2-216ENST00000546260 CD2APQ9Y5K6 639 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 MDH1P40925 334 aaKnown RBP11.53□□□□□ -0.56
SOD2-216ENST00000546260 AARSP49588 968 aaKnown RBP eCLIP11.53□□□□□ -0.56
SOD2-216ENST00000546260 DRP2Q13474 957 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 KANK3Q6NY19 840 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 KRI1Q8N9T8 703 aaKnown RBP11.53□□□□□ -0.56
SOD2-216ENST00000546260 CCDC51Q96ER9 411 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 DDX27Q96GQ7 796 aaKnown RBP11.53□□□□□ -0.56
SOD2-216ENST00000546260 STIM2Q9P246 746 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 PLA2R1Q13018 1463 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 CTNND1O60716 968 aaKnown RBP11.53□□□□□ -0.56
SOD2-216ENST00000546260 IFNAR2P48551 515 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 SPAG1Q07617 926 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 PPARAQ07869 468 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 IQGAP2Q13576 1575 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 CCHCR1Q8TD31 782 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 TEKT4Q8WW24 435 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 USP44Q9H0E7 712 aa11.53□□□□□ -0.56
SOD2-216ENST00000546260 AATFQ9NY61 560 aaKnown RBP eCLIP11.53□□□□□ -0.56
SOD2-216ENST00000546260 FANCGO15287 622 aa11.52□□□□□ -0.56
SOD2-216ENST00000546260 MTIF2P46199 727 aaKnown RBP11.52□□□□□ -0.56
SOD2-216ENST00000546260 ZNF365Q70YC5 407 aa11.52□□□□□ -0.56
SOD2-216ENST00000546260 PHAXQ9H814 394 aaKnown RBP11.52□□□□□ -0.56
SOD2-216ENST00000546260 TAF6LQ9Y6J9 622 aa11.52□□□□□ -0.56
SOD2-216ENST00000546260 ADGRL1O94910 1474 aa11.52□□□□□ -0.56
SOD2-216ENST00000546260 ARHGAP5Q13017 1502 aa11.52□□□□□ -0.56
SOD2-216ENST00000546260 FOXO3O43524 673 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 HEXIM1O94992 359 aaKnown RBP11.52□□□□□ -0.57
SOD2-216ENST00000546260 CNGA1P29973 690 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 NEXNQ0ZGT2 675 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 PLCB4Q15147 1175 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 MFSD4BQ5TF39 518 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 ZNF589Q86UQ0 364 aaPredicted RBP11.52□□□□□ -0.57
SOD2-216ENST00000546260 ANKRD13CQ8N6S4 541 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 LRRC1Q9BTT6 524 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 GGT7Q9UJ14 662 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 CHL1O00533 1208 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 FAM107AO95990 144 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 CDC25AP30304 524 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 SCTRP47872 440 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 EMBQ6PCB8 327 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 MYLK4Q86YV6 388 aaPredicted RBP11.52□□□□□ -0.57
SOD2-216ENST00000546260 SMYD4Q8IYR2 804 aaPredicted RBP11.52□□□□□ -0.57
SOD2-216ENST00000546260 SSH3Q8TE77 659 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 KCNB2Q92953 911 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 ZIM3Q96PE6 472 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 UHRF1BP1LA0JNW5 1464 aa11.52□□□□□ -0.57
SOD2-216ENST00000546260 LGR5O75473 907 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 PRPF6O94906 941 aaKnown RBP11.51□□□□□ -0.57
SOD2-216ENST00000546260 OR8K1Q8NGG5 319 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 ANKRD24Q8TF21 1146 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 TRIM47Q96LD4 638 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 LUC7LQ9NQ29 371 aaKnown RBP11.51□□□□□ -0.57
SOD2-216ENST00000546260 NOVA2Q9UNW9 492 aaKnown RBP11.51□□□□□ -0.57
SOD2-216ENST00000546260 TFR2Q9UP52 801 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 WDR62O43379 1518 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 NDUFA10O95299 355 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 MCMDC2Q4G0Z9 681 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 CACNA2D4Q7Z3S7 1137 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 ARHGAP22Q7Z5H3 698 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 TSGA10Q9BZW7 698 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 TRIM31Q9BZY9 425 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 HOMER3Q9NSC5 361 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 ATP6V1G2O95670 118 aa11.51□□□□□ -0.57
SOD2-216ENST00000546260 TMOD1P28289 359 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms