RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	METTL16	Q86W50	562 aa	Known RBP	11.42	□□□□□ -0.58
UBC-213	ENST00000546120	IFT20	Q8IY31	132 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	WHAMM	Q8TF30	809 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	N4BP2L2	Q92802	583 aa	Predicted RBP	11.42	□□□□□ -0.58
UBC-213	ENST00000546120	ABHD10	Q9NUJ1	306 aa		11.42	□□□□□ -0.58
UBC-213	ENST00000546120	GRIN2D	O15399	1336 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	NFAT5	O94916	1531 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	CFAP73	A6NFT4	308 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	SOWAHD	A6NJG2	315 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	AGPS	O00116	658 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	PPP1R37	O75864	691 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	NDUFA10	O95299	355 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	MYL1	P05976	194 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	PTPRE	P23469	700 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	PAFAH1B1	P43034	410 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	ADCY2	Q08462	1091 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	GRIK3	Q13003	919 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	TRAF1	Q13077	416 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	PDCD2	Q16342	344 aa	Predicted RBP	11.41	□□□□□ -0.58
UBC-213	ENST00000546120	AP1AR	Q63HQ0	302 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	RUFY4	Q6ZNE9	571 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	CFAP61	Q8NHU2	1237 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	NCOA7	Q8NI08	942 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	ZBTB9	Q96C00	473 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	TMEM87B	Q96K49	555 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	MAP3K14	Q99558	947 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.41	□□□□□ -0.58
UBC-213	ENST00000546120	FOXP1	Q9H334	677 aa	Predicted RBP	11.41	□□□□□ -0.58
UBC-213	ENST00000546120	KDM4C	Q9H3R0	1056 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	MIS18A	Q9NYP9	233 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	FBXO3	Q9UK99	471 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120	SPEF2	Q9C093	1822 aa		11.41	□□□□□ -0.58
UBC-213	ENST00000546120		H7C1D1	291 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	DNAJC8	O75937	253 aa	Predicted RBP	11.4	□□□□□ -0.58
UBC-213	ENST00000546120	XRCC4	Q13426	336 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	PNOC	Q13519	176 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	AMOT	Q4VCS5	1084 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	TNNI3K	Q59H18	835 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	SPDYC	Q5MJ68	293 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	CFAP58	Q5T655	872 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	FBXW10	Q5XX13	1052 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	NBPF10	Q6P3W6	841 aa	Known RBP	11.4	□□□□□ -0.58
UBC-213	ENST00000546120	C6orf89	Q6UWU4	347 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	CACNA2D4	Q7Z3S7	1137 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	IL17RE	Q8NFR9	667 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	CAGE1	Q8TC20	777 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	FERMT2	Q96AC1	680 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	FAXDC2	Q96IV6	333 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	CCDC114	Q96M63	670 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	TCEANC2	Q96MN5	208 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	EYA1	Q99502	592 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	DNAJC7	Q99615	494 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	ZSWIM4	Q9H7M6	989 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	ZRANB1	Q9UGI0	708 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	SRPRB	Q9Y5M8	271 aa	Known RBP	11.4	□□□□□ -0.58
UBC-213	ENST00000546120	FPGT-TNNI3K	V9GXZ4	949 aa		11.4	□□□□□ -0.58
UBC-213	ENST00000546120	RTN2	O75298	545 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	TACC1	O75410	805 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	FBLN1	P23142	703 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	EEF1G	P26641	437 aa	Known RBP	11.39	□□□□□ -0.59
UBC-213	ENST00000546120	LSP1	P33241	339 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	CLNS1A	P54105	237 aa	Known RBP	11.39	□□□□□ -0.59
UBC-213	ENST00000546120	PAK2	Q13177	524 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	PTGIS	Q16647	500 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	LONRF3	Q496Y0	759 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	FIGN	Q5HY92	759 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	APTX	Q7Z2E3	356 aa	Known RBP	11.39	□□□□□ -0.59
UBC-213	ENST00000546120	RALYL	Q86SE5	291 aa	Known RBP	11.39	□□□□□ -0.59
UBC-213	ENST00000546120	CCDC13	Q8IYE1	715 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	TEX9	Q8N6V9	391 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	NOA1	Q8NC60	698 aa	Known RBP	11.39	□□□□□ -0.59
UBC-213	ENST00000546120	JAKMIP2	Q96AA8	810 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	SAAL1	Q96ER3	474 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	OSBPL9	Q96SU4	736 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	DESI2	Q9BSY9	194 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
UBC-213	ENST00000546120	CNOT10	Q9H9A5	744 aa	Known RBP	11.39	□□□□□ -0.59
UBC-213	ENST00000546120	LUC7L	Q9NQ29	371 aa	Known RBP	11.39	□□□□□ -0.59
UBC-213	ENST00000546120	RWDD2A	Q9UIY3	292 aa		11.39	□□□□□ -0.59
UBC-213	ENST00000546120	LUC7L2	Q9Y383	392 aa	Known RBP	11.39	□□□□□ -0.59
UBC-213	ENST00000546120	NCKAP5L	Q9HCH0	1330 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	SYNRG	Q9UMZ2	1314 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	MYO5B	Q9ULV0	1848 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	GRID2IP	A4D2P6	1211 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	PATL2	C9JE40	543 aa	Known RBP	11.38	□□□□□ -0.59
UBC-213	ENST00000546120	RNF113A	O15541	343 aa	Known RBP	11.38	□□□□□ -0.59
UBC-213	ENST00000546120	MGRN1	O60291	552 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	NEBL	O76041	1014 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	POLR3D	P05423	398 aa	Predicted RBP	11.38	□□□□□ -0.59
UBC-213	ENST00000546120	GBP2	P32456	591 aa	Predicted RBP	11.38	□□□□□ -0.59
UBC-213	ENST00000546120	MDH1	P40925	334 aa	Known RBP	11.38	□□□□□ -0.59
UBC-213	ENST00000546120	CCT2	P78371	535 aa	Known RBP	11.38	□□□□□ -0.59
UBC-213	ENST00000546120	KIF5A	Q12840	1032 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	SEPT2	Q15019	361 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	MEA1	Q16626	185 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	NAA35	Q5VZE5	725 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	TLDC1	Q6P9B6	456 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	NLRP14	Q86W24	1093 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	VPS37D	Q86XT2	251 aa		11.38	□□□□□ -0.59
UBC-213	ENST00000546120	ANKS4B	Q8N8V4	417 aa		11.38	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms