RNA–Protein interactions for RNA: ENST00000545784.5

LINC00939-203, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best)

Gene LINC00939, Length 2,078 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-203ENST00000545784 ORC4O43929 436 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 PRDM1O75626 825 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 HSPA6P17066 643 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 IMMTQ16891 758 aaKnown RBP12.17□□□□□ -0.46
LINC00939-203ENST00000545784 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 CREB3L3Q68CJ9 461 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 SCYL3Q8IZE3 742 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 IL17RAQ96F46 866 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 RASSF10A6NK89 507 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 GDF11O95390 407 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 SLC3A2P08195 630 aaKnown RBP12.17□□□□□ -0.46
LINC00939-203ENST00000545784 AKR1B1P15121 316 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 PTPRAP18433 802 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 PDE4BQ07343 736 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 PDCL3Q9H2J4 239 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 MKNK2Q9HBH9 465 aa12.17□□□□□ -0.46
LINC00939-203ENST00000545784 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.17□□□□□ -0.46
LINC00939-203ENST00000545784 ABT1Q9ULW3 272 aaKnown RBP12.17□□□□□ -0.46
LINC00939-203ENST00000545784 FAM155AB1AL88 458 aaPredicted RBP12.16□□□□□ -0.46
LINC00939-203ENST00000545784 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
LINC00939-203ENST00000545784 GH2P01242 217 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 HSPA4P34932 840 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 GJA5P36382 358 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 TSGA10IPQ3SY00 556 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 RGMBQ6NW40 437 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 STOX1Q6ZVD7 989 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 SIAH1Q8IUQ4 282 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 RASEFQ8IZ41 740 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 CNKSR2Q8WXI2 1034 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 CCDC17Q96LX7 622 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 MAP7D2Q96T17 732 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 GINM1Q9NU53 330 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 CSADQ9Y600 493 aa12.16□□□□□ -0.46
LINC00939-203ENST00000545784 IGKV6D-41A0A0C4DH26 115 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
LINC00939-203ENST00000545784 ABCB5Q2M3G0 1257 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 MFSD6Q6ZSS7 791 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 ELP3Q9H9T3 547 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 ZNF287Q9HBT7 754 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 CCDC39Q9UFE4 941 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 ZBTB21Q9ULJ3 1066 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 NEDD4P46934 1319 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 CUL4AQ13619 759 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 DEFB115Q30KQ5 88 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 FAM47AQ5JRC9 791 aa12.15□□□□□ -0.46
LINC00939-203ENST00000545784 ZNF444Q8N0Y2 327 aaPredicted RBP12.15□□□□□ -0.46
LINC00939-203ENST00000545784 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.46
LINC00939-203ENST00000545784 SPDYE5A6NIY4 337 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 E7EWF7 191 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 ASNSP08243 561 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 ZNF157P51786 506 aaPredicted RBP12.14□□□□□ -0.47
LINC00939-203ENST00000545784 NEK4P51957 841 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 TFAP4Q01664 338 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 PPATQ06203 517 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 COL9A3Q14050 684 aaPredicted RBP12.14□□□□□ -0.47
LINC00939-203ENST00000545784 SEPT2Q15019 361 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 SPRYD7Q5W111 196 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 CCDC84Q86UT8 332 aaPredicted RBP12.14□□□□□ -0.47
LINC00939-203ENST00000545784 ERO1BQ86YB8 467 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 RASAL3Q86YV0 1011 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 OPTNQ96CV9 577 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 TMX3Q96JJ7 454 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 RBSNQ9H1K0 784 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 PICK1Q9NRD5 415 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 ZKSCAN5Q9Y2L8 839 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 AFG3L2Q9Y4W6 797 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 BRD1O95696 1058 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 SLC10A3P09131 477 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 PKP1Q13835 747 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 TMEM179Q6ZVK1 233 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 MTERF4Q7Z6M4 381 aaKnown RBP12.14□□□□□ -0.47
LINC00939-203ENST00000545784 GPT2Q8TD30 523 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 WNK4Q96J92 1243 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 WDR18Q9BV38 432 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 IL17RBQ9NRM6 502 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 ZDHHC9Q9Y397 364 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 ZHX2Q9Y6X8 837 aa12.14□□□□□ -0.47
LINC00939-203ENST00000545784 USP17L5A8MUK1 530 aa12.13□□□□□ -0.47
LINC00939-203ENST00000545784 NOVP48745 357 aa12.13□□□□□ -0.47
LINC00939-203ENST00000545784 CYP4F22Q6NT55 531 aa12.13□□□□□ -0.47
LINC00939-203ENST00000545784 FAM184AQ8NB25 1140 aa12.13□□□□□ -0.47
LINC00939-203ENST00000545784 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
LINC00939-203ENST00000545784 CABP5Q9NP86 173 aa12.13□□□□□ -0.47
LINC00939-203ENST00000545784 ZSWIM5Q9P217 1185 aa12.13□□□□□ -0.47
LINC00939-203ENST00000545784 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 LAMB1P07942 1786 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 CEP350Q5VT06 3117 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
LINC00939-203ENST00000545784 IRF6O14896 467 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 RANBP6O60518 1105 aaKnown RBP12.12□□□□□ -0.47
LINC00939-203ENST00000545784 PPIL2Q13356 520 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
LINC00939-203ENST00000545784 DNAJC5GQ8N7S2 189 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 ZIC5Q96T25 663 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 TCP11L1Q9NUJ3 509 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 SNX14Q9Y5W7 946 aa12.12□□□□□ -0.47
LINC00939-203ENST00000545784 OTOFQ9HC10 1997 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms