RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 Q7L0L9 218 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 MAPKAPK5Q8IW41 473 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 IFNL3Q8IZI9 196 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 SDR42E1Q8WUS8 393 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 DEFB118Q96PH6 123 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 PARK7Q99497 189 aaKnown RBP14.11□□□□□ -0.15
LTBR-214ENST00000545445 DDX4Q9NQI0 724 aaKnown RBP14.11□□□□□ -0.15
LTBR-214ENST00000545445 CTNNA3Q9UI47 895 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 ZMYM6O95789 1325 aa14.11□□□□□ -0.15
LTBR-214ENST00000545445 ATRNL1Q5VV63 1379 aa14.1□□□□□ -0.15
LTBR-214ENST00000545445 ADCY3O60266 1144 aa14.1□□□□□ -0.15
LTBR-214ENST00000545445 TFRCP02786 760 aaKnown RBP14.1□□□□□ -0.15
LTBR-214ENST00000545445 TDO2P48775 406 aa14.1□□□□□ -0.15
LTBR-214ENST00000545445 TCP10Q12799 353 aa14.1□□□□□ -0.15
LTBR-214ENST00000545445 TTC6Q86TZ1 520 aa14.1□□□□□ -0.15
LTBR-214ENST00000545445 ZSCAN29Q8IWY8 852 aaPredicted RBP14.1□□□□□ -0.15
LTBR-214ENST00000545445 DEFB123Q8N688 67 aa14.1□□□□□ -0.15
LTBR-214ENST00000545445 NAPBQ9H115 298 aa14.1□□□□□ -0.15
LTBR-214ENST00000545445 MCM9Q9NXL9 1143 aa14.1□□□□□ -0.15
LTBR-214ENST00000545445 ARPP21Q9UBL0 812 aaPredicted RBP14.1□□□□□ -0.15
LTBR-214ENST00000545445 POLR3DP05423 398 aaPredicted RBP14.09□□□□□ -0.15
LTBR-214ENST00000545445 HLA-DOAP06340 250 aa14.09□□□□□ -0.15
LTBR-214ENST00000545445 FLT3LGP49771 235 aa14.09□□□□□ -0.15
LTBR-214ENST00000545445 SBK1Q52WX2 424 aa14.09□□□□□ -0.15
LTBR-214ENST00000545445 GPAT2Q6NUI2 795 aa14.09□□□□□ -0.15
LTBR-214ENST00000545445 C7orf61Q8IZ16 206 aa14.09□□□□□ -0.15
LTBR-214ENST00000545445 DIS3LQ8TF46 1054 aaKnown RBP14.09□□□□□ -0.15
LTBR-214ENST00000545445 PI4KBQ9UBF8 816 aa14.09□□□□□ -0.15
LTBR-214ENST00000545445 UNC80Q8N2C7 3258 aa14.09□□□□□ -0.15
LTBR-214ENST00000545445 FGAP02671 866 aa14.08□□□□□ -0.16
LTBR-214ENST00000545445 VPS53Q5VIR6 699 aa14.08□□□□□ -0.16
LTBR-214ENST00000545445 FOXP4Q8IVH2 680 aaPredicted RBP14.08□□□□□ -0.16
LTBR-214ENST00000545445 MAP4K1Q92918 833 aa14.08□□□□□ -0.16
LTBR-214ENST00000545445 PAWRQ96IZ0 340 aaKnown RBP14.08□□□□□ -0.16
LTBR-214ENST00000545445 IL25Q9H293 177 aa14.08□□□□□ -0.16
LTBR-214ENST00000545445 ANO2Q9NQ90 1003 aa14.08□□□□□ -0.16
LTBR-214ENST00000545445 ZMYND8Q9ULU4 1186 aaPredicted RBP14.08□□□□□ -0.16
LTBR-214ENST00000545445 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
LTBR-214ENST00000545445 USP17L12C9JPN9 530 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 USP17L21D6R901 530 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 FOXP2O15409 715 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 SLC3A2P08195 630 aaKnown RBP14.07□□□□□ -0.16
LTBR-214ENST00000545445 C12orf60Q5U649 245 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 CTR9Q6PD62 1173 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 ZFPM1Q8IX07 1006 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 GDF15Q99988 308 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 LSG1Q9H089 658 aaKnown RBP14.07□□□□□ -0.16
LTBR-214ENST00000545445 EHD4Q9H223 541 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 EPB41L4AQ9HCS5 686 aaPredicted RBP14.07□□□□□ -0.16
LTBR-214ENST00000545445 PAK6Q9NQU5 681 aaPredicted RBP14.07□□□□□ -0.16
LTBR-214ENST00000545445 HERC5Q9UII4 1024 aaKnown RBP14.07□□□□□ -0.16
LTBR-214ENST00000545445 ZNF112Q9UJU3 913 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 PALD1Q9ULE6 856 aa14.07□□□□□ -0.16
LTBR-214ENST00000545445 FOCADQ5VW36 1801 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 DDTLA6NHG4 134 aaPredicted RBP14.06□□□□□ -0.16
LTBR-214ENST00000545445 TNPO2O14787 897 aaKnown RBP14.06□□□□□ -0.16
LTBR-214ENST00000545445 TBC1D12O60347 775 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 MAP3K10Q02779 954 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 C8orf34Q49A92 452 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 NOL9Q5SY16 702 aaKnown RBP14.06□□□□□ -0.16
LTBR-214ENST00000545445 SH3BP5LQ7L8J4 393 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 METTL16Q86W50 562 aaKnown RBP14.06□□□□□ -0.16
LTBR-214ENST00000545445 CRISPLD2Q9H0B8 497 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 ZNF287Q9HBT7 754 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 SAP30BPQ9UHR5 308 aaKnown RBP14.06□□□□□ -0.16
LTBR-214ENST00000545445 SERPINB13Q9UIV8 391 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 ANAPC4Q9UJX5 808 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 STXBP5LQ9Y2K9 1186 aa14.06□□□□□ -0.16
LTBR-214ENST00000545445 ZNF213O14771 459 aa14.05□□□□□ -0.16
LTBR-214ENST00000545445 PCP11498 1178 aaKnown RBP14.05□□□□□ -0.16
LTBR-214ENST00000545445 SYN1P17600 705 aa14.05□□□□□ -0.16
LTBR-214ENST00000545445 NT5C2P49902 561 aa14.05□□□□□ -0.16
LTBR-214ENST00000545445 PTH1RQ03431 593 aa14.05□□□□□ -0.16
LTBR-214ENST00000545445 IMMTQ16891 758 aaKnown RBP14.05□□□□□ -0.16
LTBR-214ENST00000545445 RNF20Q5VTR2 975 aa14.05□□□□□ -0.16
LTBR-214ENST00000545445 NECAB2Q7Z6G3 386 aa14.05□□□□□ -0.16
LTBR-214ENST00000545445 PXYLP1Q8TE99 480 aa14.05□□□□□ -0.16
LTBR-214ENST00000545445 COL25A1Q9BXS0 654 aaPredicted RBP14.05□□□□□ -0.16
LTBR-214ENST00000545445 TRIM34Q9BYJ4 488 aa14.05□□□□□ -0.16
LTBR-214ENST00000545445 SWAP70Q9UH65 585 aa14.05□□□□□ -0.16
LTBR-214ENST00000545445 MINDY4BA8MYZ0 360 aa14.04□□□□□ -0.16
LTBR-214ENST00000545445 CXCL11O14625 94 aa14.04□□□□□ -0.16
LTBR-214ENST00000545445 BMP8BP34820 402 aa14.04□□□□□ -0.16
LTBR-214ENST00000545445 PPARAQ07869 468 aa14.04□□□□□ -0.16
LTBR-214ENST00000545445 IRF5Q13568 498 aa14.04□□□□□ -0.16
LTBR-214ENST00000545445 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
LTBR-214ENST00000545445 GADL1Q6ZQY3 521 aa14.04□□□□□ -0.16
LTBR-214ENST00000545445 CRACR2BQ8N4Y2 399 aaPredicted RBP14.04□□□□□ -0.16
LTBR-214ENST00000545445 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.04□□□□□ -0.16
LTBR-214ENST00000545445 MTMR10Q9NXD2 777 aa14.04□□□□□ -0.16
LTBR-214ENST00000545445 RBM8AQ9Y5S9 174 aaKnown RBP14.04□□□□□ -0.16
LTBR-214ENST00000545445 CDK5RAP2Q96SN8 1893 aa14.04□□□□□ -0.16
LTBR-214ENST00000545445 ALPK3Q96L96 1907 aa14.03□□□□□ -0.16
LTBR-214ENST00000545445 A0A0G2JLL6 359 aaPredicted RBP14.03□□□□□ -0.16
LTBR-214ENST00000545445 MAGEA10P43363 369 aaPredicted RBP14.03□□□□□ -0.16
LTBR-214ENST00000545445 PLCD1P51178 756 aa14.03□□□□□ -0.16
LTBR-214ENST00000545445 GABPAQ06546 454 aa14.03□□□□□ -0.16
LTBR-214ENST00000545445 PDE4BQ07343 736 aa14.03□□□□□ -0.16
LTBR-214ENST00000545445 PRRT2Q7Z6L0 340 aaPredicted RBP14.03□□□□□ -0.16
LTBR-214ENST00000545445 SMCR8Q8TEV9 937 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms