RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 USP17L13C9JLJ4 530 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 USP17L11C9JVI0 530 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 USP17L18D6R9N7 530 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 USP17L22D6RA61 530 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 USP17L17D6RBQ6 530 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 USP17L19D6RCP7 530 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 USP17L20D6RJB6 530 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 POLR3DP05423 398 aaPredicted RBP17.13■□□□□ 0.33
DDX11-228ENST00000545115 IFIT2P09913 472 aaKnown RBP17.13■□□□□ 0.33
DDX11-228ENST00000545115 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
DDX11-228ENST00000545115 PDE6AP16499 860 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 PLCD1P51178 756 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 USP17L24Q0WX57 530 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 MAP3K21Q5TCX8 1036 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 GPR142Q7Z601 462 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 TRMT44Q8IYL2 757 aaKnown RBP17.13■□□□□ 0.33
DDX11-228ENST00000545115 CRNKL1Q9BZJ0 848 aaKnown RBP17.13■□□□□ 0.33
DDX11-228ENST00000545115 KIAA1683Q9H0B3 1180 aa17.13■□□□□ 0.33
DDX11-228ENST00000545115 APBB1O00213 710 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 ZKSCAN1P17029 563 aaPredicted RBP17.12■□□□□ 0.33
DDX11-228ENST00000545115 VCAM1P19320 739 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 SHMT1P34896 483 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 RGS2P41220 211 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 POTEEQ6S8J3 1075 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 PLEKHH3Q7Z736 793 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 USP6NLQ92738 828 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 DNAJC2Q99543 621 aaKnown RBP17.12■□□□□ 0.33
DDX11-228ENST00000545115 APBA2Q99767 749 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
DDX11-228ENST00000545115 RABGAP1Q9Y3P9 1069 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 NAV1Q8NEY1 1877 aa17.12■□□□□ 0.33
DDX11-228ENST00000545115 GOLIM4O00461 696 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 CCNA1P78396 465 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 GABPAQ06546 454 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 MORN1Q5T089 497 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 CATSPERGQ6ZRH7 1159 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 ACER1Q8TDN7 264 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 NBPF3Q9H094 633 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 ZBTB40Q9NUA8 1239 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 MCM9Q9NXL9 1143 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 OGDHLQ9ULD0 1010 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 COG6Q9Y2V7 657 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 ZNF532Q9HCE3 1301 aa17.11■□□□□ 0.33
DDX11-228ENST00000545115 A0A1W2PPC1 479 aa17.1■□□□□ 0.33
DDX11-228ENST00000545115 RAB11FIP3O75154 756 aa17.1■□□□□ 0.33
DDX11-228ENST00000545115 CNMDO75829 334 aa17.1■□□□□ 0.33
DDX11-228ENST00000545115 LBX2Q6XYB7 198 aa17.1■□□□□ 0.33
DDX11-228ENST00000545115 SIRT2Q8IXJ6 389 aa17.1■□□□□ 0.33
DDX11-228ENST00000545115 CHMP4BQ9H444 224 aaKnown RBP17.1■□□□□ 0.33
DDX11-228ENST00000545115 RANBP2P49792 3224 aaKnown RBP17.09■□□□□ 0.33
DDX11-228ENST00000545115 TCRBV5S4A2TA0A5A2 114 aa17.09■□□□□ 0.33
DDX11-228ENST00000545115 GLRX3O76003 335 aaKnown RBP17.09■□□□□ 0.33
DDX11-228ENST00000545115 MNX1P50219 401 aaPredicted RBP17.09■□□□□ 0.33
DDX11-228ENST00000545115 CACNB2Q08289 660 aaPredicted RBP17.09■□□□□ 0.33
DDX11-228ENST00000545115 SEPT2Q15019 361 aa17.09■□□□□ 0.33
DDX11-228ENST00000545115 LCORLQ8N3X6 602 aa17.09■□□□□ 0.33
DDX11-228ENST00000545115 SDR42E1Q8WUS8 393 aa17.09■□□□□ 0.33
DDX11-228ENST00000545115 C11orf49Q9H6J7 331 aa17.09■□□□□ 0.33
DDX11-228ENST00000545115 RPAP3Q9H6T3 665 aaPredicted RBP17.09■□□□□ 0.33
DDX11-228ENST00000545115 DCP1AQ9NPI6 582 aaPredicted RBP17.09■□□□□ 0.33
DDX11-228ENST00000545115 ALPK3Q96L96 1907 aa17.08■□□□□ 0.33
DDX11-228ENST00000545115 MPHOSPH10O00566 681 aaKnown RBP17.08■□□□□ 0.32
DDX11-228ENST00000545115 GUCY1A2P33402 732 aa17.08■□□□□ 0.32
DDX11-228ENST00000545115 MAP2K5Q13163 448 aa17.08■□□□□ 0.32
DDX11-228ENST00000545115 CCL14Q16627 93 aa17.08■□□□□ 0.32
DDX11-228ENST00000545115 WDR78Q5VTH9 848 aa17.08■□□□□ 0.32
DDX11-228ENST00000545115 C7orf61Q8IZ16 206 aa17.08■□□□□ 0.32
DDX11-228ENST00000545115 EDC3Q96F86 508 aaKnown RBP17.08■□□□□ 0.32
DDX11-228ENST00000545115 BCL11AQ9H165 835 aa17.08■□□□□ 0.32
DDX11-228ENST00000545115 PAG1Q9NWQ8 432 aa17.08■□□□□ 0.32
DDX11-228ENST00000545115 SPDYE16A6NNV3 312 aaPredicted RBP17.07■□□□□ 0.32
DDX11-228ENST00000545115 EVX2Q03828 476 aa17.07■□□□□ 0.32
DDX11-228ENST00000545115 SWAP70Q9UH65 585 aa17.07■□□□□ 0.32
DDX11-228ENST00000545115 IVNS1ABPQ9Y6Y0 642 aa17.07■□□□□ 0.32
DDX11-228ENST00000545115 SLC15A5A6NIM6 579 aa17.06■□□□□ 0.32
DDX11-228ENST00000545115 ATP5JP18859 108 aa17.06■□□□□ 0.32
DDX11-228ENST00000545115 CCND3P30281 292 aaPredicted RBP17.06■□□□□ 0.32
DDX11-228ENST00000545115 ADD2P35612 726 aa17.06■□□□□ 0.32
DDX11-228ENST00000545115 TMEM179Q6ZVK1 233 aa17.06■□□□□ 0.32
DDX11-228ENST00000545115 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■■□□ 15.5
DDX11-228ENST00000545115 BOLA2Q9H3K6 86 aa17.06■□□□□ 0.32
DDX11-228ENST00000545115 ARMT1Q9H993 441 aa17.06■□□□□ 0.32
DDX11-228ENST00000545115 BTBD7Q9P203 1132 aa17.06■□□□□ 0.32
DDX11-228ENST00000545115 STAP2Q9UGK3 403 aa17.06■□□□□ 0.32
DDX11-228ENST00000545115 PFASO15067 1338 aa17.05■□□□□ 0.32
DDX11-228ENST00000545115 A0A1W2PRG0 241 aa17.05■□□□□ 0.32
DDX11-228ENST00000545115 PTPREP23469 700 aa17.05■□□□□ 0.32
DDX11-228ENST00000545115 GRB14Q14449 540 aa17.05■□□□□ 0.32
DDX11-228ENST00000545115 MFSD14CQ5VZR4 134 aa17.05■□□□□ 0.32
DDX11-228ENST00000545115 SLC44A5Q8NCS7 719 aa17.05■□□□□ 0.32
DDX11-228ENST00000545115 ATP8A2Q9NTI2 1148 aa17.05■□□□□ 0.32
DDX11-228ENST00000545115 MBD4O95243 580 aa17.04■□□□□ 0.32
DDX11-228ENST00000545115 HOXC6P09630 235 aa17.04■□□□□ 0.32
DDX11-228ENST00000545115 CYP2D6P10635 497 aa17.04■□□□□ 0.32
DDX11-228ENST00000545115 COG2Q14746 738 aa17.04■□□□□ 0.32
DDX11-228ENST00000545115 LHX8Q68G74 356 aa17.04■□□□□ 0.32
DDX11-228ENST00000545115 HAUS7Q99871 368 aa17.04■□□□□ 0.32
DDX11-228ENST00000545115 GDF15Q99988 308 aa17.04■□□□□ 0.32
DDX11-228ENST00000545115 TANGO6Q9C0B7 1094 aa17.04■□□□□ 0.32
DDX11-228ENST00000545115 HOXC10Q9NYD6 342 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms