RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 CCDC24Q8N4L8 307 aa22.15■■□□□ 1.14
BPTF-208ENST00000544778 DEPTORQ8TB45 409 aa22.15■■□□□ 1.14
BPTF-208ENST00000544778 EFCC1Q9HA90 598 aa22.15■■□□□ 1.14
BPTF-208ENST00000544778 CLNS1AP54105 237 aaKnown RBP22.14■■□□□ 1.14
BPTF-208ENST00000544778 NUCKS1Q9H1E3 243 aaKnown RBP22.14■■□□□ 1.14
BPTF-208ENST00000544778 PLCH2O75038 1416 aa22.14■■□□□ 1.14
BPTF-208ENST00000544778 STAM2O75886 525 aa22.14■■□□□ 1.14
BPTF-208ENST00000544778 PUM3Q15397 648 aaKnown RBP22.14■■□□□ 1.14
BPTF-208ENST00000544778 PEX26Q7Z412 305 aa22.14■■□□□ 1.14
BPTF-208ENST00000544778 BANK1Q8NDB2 785 aa22.14■■□□□ 1.14
BPTF-208ENST00000544778 PDZD8Q8NEN9 1154 aa22.14■■□□□ 1.14
BPTF-208ENST00000544778 NUP58Q9BVL2 599 aa22.14■■□□□ 1.14
BPTF-208ENST00000544778 ANKRD20A3Q5VUR7 823 aa22.14■■□□□ 1.13
BPTF-208ENST00000544778 TESPA1A2RU30 521 aaPredicted RBP22.14■■□□□ 1.13
BPTF-208ENST00000544778 PPFIA2O75334 1257 aa22.14■■□□□ 1.13
BPTF-208ENST00000544778 CTDSPL2Q05D32 466 aa22.14■■□□□ 1.13
BPTF-208ENST00000544778 NIM1KQ8IY84 436 aa22.14■■□□□ 1.13
BPTF-208ENST00000544778 BAG5Q9UL15 447 aa22.14■■□□□ 1.13
BPTF-208ENST00000544778 ANKRD44Q8N8A2 993 aa22.14■■□□□ 1.13
BPTF-208ENST00000544778 ZNF277Q9NRM2 450 aaPredicted RBP22.14■■□□□ 1.13
BPTF-208ENST00000544778 YWHAEP62258 255 aaKnown RBP22.13■■□□□ 1.13
BPTF-208ENST00000544778 NLRX1Q86UT6 975 aa22.13■■□□□ 1.13
BPTF-208ENST00000544778 CSADQ9Y600 493 aa22.13■■□□□ 1.13
BPTF-208ENST00000544778 IL16Q14005 1332 aa22.13■■□□□ 1.13
BPTF-208ENST00000544778 GPR162Q16538 588 aa22.13■■□□□ 1.13
BPTF-208ENST00000544778 TTC38Q5R3I4 469 aa22.13■■□□□ 1.13
BPTF-208ENST00000544778 MRPL50Q8N5N7 158 aaKnown RBP22.13■■□□□ 1.13
BPTF-208ENST00000544778 KCNH3Q9ULD8 1083 aa22.13■■□□□ 1.13
BPTF-208ENST00000544778 RYBPQ8N488 228 aaPredicted RBP22.13■■□□□ 1.13
BPTF-208ENST00000544778 CCDC94Q9BW85 323 aaPredicted RBP22.13■■□□□ 1.13
BPTF-208ENST00000544778 NBPF3Q9H094 633 aa22.13■■□□□ 1.13
BPTF-208ENST00000544778 KLHL30Q0D2K2 578 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 NME8Q8N427 588 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 HAUS8Q9BT25 410 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 GLT8D2Q9H1C3 349 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 HDAC1Q13547 482 aaPredicted RBP22.12■■□□□ 1.13
BPTF-208ENST00000544778 LONRF2Q1L5Z9 754 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 SFMBT2Q5VUG0 894 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 CCDC68Q9H2F9 335 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 MRPL46Q9H2W6 279 aaKnown RBP22.12■■□□□ 1.13
BPTF-208ENST00000544778 TUBBP07437 444 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 HDAC11Q96DB2 347 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 BTG4Q9NY30 223 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 VCX3AQ9NNX9 186 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 TAF5LO75529 589 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 CYP2J2P51589 502 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 COG7P83436 770 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 CAPN12Q6ZSI9 719 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 PNMA8AQ86V59 439 aaPredicted RBP22.12■■□□□ 1.13
BPTF-208ENST00000544778 ARAP1Q96P48 1450 aa22.12■■□□□ 1.13
BPTF-208ENST00000544778 H7C1D1 291 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 PRDM1O75626 825 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 TGFBRAP1Q8WUH2 860 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 NELFBQ8WX92 580 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.11■■□□□ 1.13
BPTF-208ENST00000544778 TTF2Q9UNY4 1162 aaKnown RBP22.11■■□□□ 1.13
BPTF-208ENST00000544778 OLA1Q9NTK5 396 aaKnown RBP22.11■■□□□ 1.13
BPTF-208ENST00000544778 INPP5BP32019 993 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 ATP6V1E1P36543 226 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 ANAPC5Q9UJX4 755 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 RUFY4Q6ZNE9 571 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 PCDH11XQ9BZA7 1347 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 PCDH11YQ9BZA8 1340 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 TIAM1Q13009 1591 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 BAG2O95816 211 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 LRWD1Q9UFC0 647 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 PFDN6O15212 129 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 U2AF2P26368 475 aaKnown RBP eCLIP22.11■■□□□ 1.131e-7■□□□□ 11.3
BPTF-208ENST00000544778 CCDC13Q8IYE1 715 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 ANKRD36BQ8N2N9 1353 aa22.11■■□□□ 1.13
BPTF-208ENST00000544778 A0A1B0GUL7 405 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 S100BP04271 92 aaPredicted RBP22.1■■□□□ 1.13
BPTF-208ENST00000544778 RAB20Q9NX57 234 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 A0A1B0GUA9 196 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 TIMM10P62072 90 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 RPS6KA1Q15418 735 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 TAB2Q9NYJ8 693 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 FLOT1O75955 427 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 CPA1P15085 419 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 CXorf38Q8TB03 319 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 SPDL1Q96EA4 605 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 BCAP29Q9UHQ4 241 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 IFNB1P01574 187 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 XPAP23025 273 aaPredicted RBP22.1■■□□□ 1.13
BPTF-208ENST00000544778 NCOA1Q15788 1441 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 ANO1Q5XXA6 986 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 TYW1BQ6NUM6 668 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 ZKSCAN5Q9Y2L8 839 aa22.1■■□□□ 1.13
BPTF-208ENST00000544778 MX2P20592 715 aa22.09■■□□□ 1.13
BPTF-208ENST00000544778 MMEL1Q495T6 779 aa22.09■■□□□ 1.13
BPTF-208ENST00000544778 SPECC1L-ADORA2AF8WAN1 911 aa22.09■■□□□ 1.13
BPTF-208ENST00000544778 PCDHB13Q9Y5F0 798 aa22.09■■□□□ 1.13
BPTF-208ENST00000544778 OPHN1O60890 802 aa22.09■■□□□ 1.13
BPTF-208ENST00000544778 KAZNQ674X7 775 aa22.09■■□□□ 1.13
BPTF-208ENST00000544778 TSPYL2Q9H2G4 693 aaPredicted RBP22.09■■□□□ 1.13
BPTF-208ENST00000544778 RPS6KB1P23443 525 aa22.09■■□□□ 1.13
BPTF-208ENST00000544778 PHBP35232 272 aa22.09■■□□□ 1.13
BPTF-208ENST00000544778 ECE1P42892 770 aa22.09■■□□□ 1.13
BPTF-208ENST00000544778 CABP7Q86V35 215 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms