RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 PPFIBP1Q86W92 1011 aa14.84□□□□□ -0.03
CPSF7-223ENST00000544669 KRT222Q8N1A0 295 aa14.84□□□□□ -0.03
CPSF7-223ENST00000544669 MNS1Q8NEH6 495 aa14.84□□□□□ -0.03
CPSF7-223ENST00000544669 UBXN4Q92575 508 aa14.84□□□□□ -0.03
CPSF7-223ENST00000544669 WNK3Q9BYP7 1800 aa14.83□□□□□ -0.03
CPSF7-223ENST00000544669 EFCAB8A8MWE9 144 aa14.83□□□□□ -0.04
CPSF7-223ENST00000544669 MYL1P05976 194 aa14.83□□□□□ -0.04
CPSF7-223ENST00000544669 TROAPQ12815 778 aa14.83□□□□□ -0.04
CPSF7-223ENST00000544669 NR1I3Q14994 352 aa14.83□□□□□ -0.04
CPSF7-223ENST00000544669 SH3RF1Q7Z6J0 888 aa14.83□□□□□ -0.04
CPSF7-223ENST00000544669 NLRP3Q96P20 1036 aa14.83□□□□□ -0.04
CPSF7-223ENST00000544669 MINPP1Q9UNW1 487 aa14.83□□□□□ -0.04
CPSF7-223ENST00000544669 V9GY48 417 aaPredicted RBP14.83□□□□□ -0.04
CPSF7-223ENST00000544669 ZNF831Q5JPB2 1677 aa14.83□□□□□ -0.04
CPSF7-223ENST00000544669 DOT1LQ8TEK3 1739 aa14.83□□□□□ -0.04
CPSF7-223ENST00000544669 A0A1B0GTH6 734 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 KIF20AO95235 890 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 FUT2Q10981 343 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 NR5A1Q13285 461 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 TRIM14Q14142 442 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 TTC38Q5R3I4 469 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 RC3H1Q5TC82 1133 aaKnown RBP14.82□□□□□ -0.04
CPSF7-223ENST00000544669 NKX2-3Q8TAU0 364 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 ZNF287Q9HBT7 754 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 TACC3Q9Y6A5 838 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 CNTNAP4Q9C0A0 1308 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 CHD4Q14839 1912 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 AKR1B15C9JRZ8 316 aaPredicted RBP14.82□□□□□ -0.04
CPSF7-223ENST00000544669 HIBADHP31937 336 aaKnown RBP14.82□□□□□ -0.04
CPSF7-223ENST00000544669 RPS8P62241 208 aaKnown RBP14.82□□□□□ -0.04
CPSF7-223ENST00000544669 ATP2C1P98194 919 aaPredicted RBP14.82□□□□□ -0.04
CPSF7-223ENST00000544669 ITPK1Q13572 414 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 PKN1Q16512 942 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 CTR9Q6PD62 1173 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 DGKHQ86XP1 1220 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 CNGA4Q8IV77 575 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 CCDC82Q8N4S0 544 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 SDR42E1Q8WUS8 393 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 FAM84BQ96KN1 310 aaPredicted RBP14.82□□□□□ -0.04
CPSF7-223ENST00000544669 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.82□□□□□ -0.04
CPSF7-223ENST00000544669 PPP2R2CQ9Y2T4 447 aa14.82□□□□□ -0.04
CPSF7-223ENST00000544669 SLIT2O94813 1529 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 LAD1O00515 517 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 CCDC175P0C221 793 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 SCG2P13521 617 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 BMP6P22004 513 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 CASQ1P31415 396 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 LONP1P36776 959 aaKnown RBP14.81□□□□□ -0.04
CPSF7-223ENST00000544669 GYG1P46976 350 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 NLRP5P59047 1200 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 GSTO1P78417 241 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 JAKMIP3Q5VZ66 844 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 PDILTQ8N807 584 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 PAGE5Q96GU1 130 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 LZTS2Q9BRK4 669 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 SPATA31A5Q5VU36 1347 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 ITIH6Q6UXX5 1313 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 SPATA31A7Q8IWB4 1347 aa14.81□□□□□ -0.04
CPSF7-223ENST00000544669 PFKFB3Q16875 520 aaPredicted RBP14.8□□□□□ -0.04
CPSF7-223ENST00000544669 REXO1L1PQ8IX06 675 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 MARCH10Q8NA82 808 aaPredicted RBP14.8□□□□□ -0.04
CPSF7-223ENST00000544669 ANKS1AQ92625 1134 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 DPF2Q92785 391 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 DHX58Q96C10 678 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 NSUN4Q96CB9 384 aaKnown RBP14.8□□□□□ -0.04
CPSF7-223ENST00000544669 VPS54Q9P1Q0 977 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 USP17L12C9JPN9 530 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 USP17L21D6R901 530 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 ZSCAN20P17040 1043 aaPredicted RBP14.8□□□□□ -0.04
CPSF7-223ENST00000544669 HOXA7P31268 230 aaPredicted RBP14.8□□□□□ -0.04
CPSF7-223ENST00000544669 PPP1R2P41236 205 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 DPYDQ12882 1025 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 ERFEQ4G0M1 354 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 TPTE2Q6XPS3 522 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 CCDC148Q8NFR7 591 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 OXER1Q8TDS5 423 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 SYNRGQ9UMZ2 1314 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 DUOX1Q9NRD9 1551 aa14.8□□□□□ -0.04
CPSF7-223ENST00000544669 PHLPP1O60346 1717 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 A0A0G2JS52 829 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 LRRC10BA6NIK2 292 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 SNAP23O00161 211 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 GTPBP6O43824 516 aaPredicted RBP14.79□□□□□ -0.04
CPSF7-223ENST00000544669 LDHCP07864 332 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 H2AFXP16104 143 aaPredicted RBP14.79□□□□□ -0.04
CPSF7-223ENST00000544669 ATP2B1P20020 1258 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 SPECC1Q5M775 1068 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 TRIM65Q6PJ69 517 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 ADGRA1Q86SQ6 560 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 WDR66Q8TBY9 1149 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 SYMPKQ92797 1274 aaKnown RBP14.79□□□□□ -0.04
CPSF7-223ENST00000544669 TNFRSF25Q93038 417 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 SETDB2Q96T68 719 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 MAGEF1Q9HAY2 307 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 TAOK2Q9UL54 1235 aa14.79□□□□□ -0.04
CPSF7-223ENST00000544669 COL16A1Q07092 1604 aaPredicted RBP14.79□□□□□ -0.04
CPSF7-223ENST00000544669 TSPY2A6NKD2 308 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 URI1O94763 535 aaPredicted RBP14.78□□□□□ -0.04
CPSF7-223ENST00000544669 ADAMTS2O95450 1211 aa14.78□□□□□ -0.04
CPSF7-223ENST00000544669 BAG3O95817 575 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms