RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CEP63Q96MT8 703 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 CARD6Q9BX69 1037 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 MAK16Q9BXY0 300 aaKnown RBP14.27□□□□□ -0.13
CHD4-211ENST00000544484 DBNLQ9UJU6 430 aaKnown RBP14.27□□□□□ -0.13
CHD4-211ENST00000544484 PFKFB1P16118 471 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 ZBTB16Q05516 673 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 TAF12Q16514 161 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 PNMA1Q8ND90 353 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 SUPT20HQ8NEM7 779 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.27□□□□□ -0.13
CHD4-211ENST00000544484 NOD1Q9Y239 953 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 MYOM2P54296 1465 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 CRKLP46109 303 aaKnown RBP14.27□□□□□ -0.13
CHD4-211ENST00000544484 PPARDQ03181 441 aa14.27□□□□□ -0.13
CHD4-211ENST00000544484 VWA3BQ502W6 1294 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 C6orf163Q5TEZ5 329 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 SLF1Q9BQI6 1058 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 TRIM31Q9BZY9 425 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 ZSWIM6Q9HCJ5 1215 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 FAM207AQ9NSI2 230 aaPredicted RBP14.26□□□□□ -0.13
CHD4-211ENST00000544484 TCP10L2B9ZVM9 353 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 INF2Q27J81 1249 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 ADCK5Q3MIX3 580 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 SREK1Q8WXA9 508 aaKnown RBP14.26□□□□□ -0.13
CHD4-211ENST00000544484 NLRC4Q9NPP4 1024 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 AGTPBP1Q9UPW5 1226 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 MRRFQ96E11 262 aaKnown RBP14.26□□□□□ -0.13
CHD4-211ENST00000544484 TXNDC16Q9P2K2 825 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.26□□□□□ -0.138e-12■■■□□ 17
CHD4-211ENST00000544484 BTBD18B2RXH4 712 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 SORBS3O60504 671 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 NOSTRINQ8IVI9 506 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 IPO4Q8TEX9 1081 aaKnown RBP14.26□□□□□ -0.13
CHD4-211ENST00000544484 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 FAM135BQ49AJ0 1406 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 UGGT1Q9NYU2 1555 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 TECP42680 631 aa14.26□□□□□ -0.13
CHD4-211ENST00000544484 PDE8BO95263 885 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 ZNF827Q17R98 1081 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 ARHGEF25Q86VW2 580 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 STMN4Q9H169 189 aaPredicted RBP14.25□□□□□ -0.13
CHD4-211ENST00000544484 BTDP43251 543 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 MAGEA1P43355 309 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 MRPS9P82933 396 aaKnown RBP14.25□□□□□ -0.13
CHD4-211ENST00000544484 SLC9C1Q4G0N8 1177 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 PLCD3Q8N3E9 789 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 XPO4Q9C0E2 1151 aaKnown RBP14.25□□□□□ -0.13
CHD4-211ENST00000544484 MTMR6Q9Y217 621 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 UAP1Q16222 522 aaPredicted RBP14.25□□□□□ -0.13
CHD4-211ENST00000544484 ADALQ6DHV7 355 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 EXOC7Q9UPT5 735 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 CPLX4Q7Z7G2 160 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 BLIDQ8IZY5 108 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 PROCA1Q8NCQ7 364 aaPredicted RBP14.25□□□□□ -0.13
CHD4-211ENST00000544484 GPHNQ9NQX3 736 aaPredicted RBP14.25□□□□□ -0.13
CHD4-211ENST00000544484 PCDHB13Q9Y5F0 798 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 NEO1Q92859 1461 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 KLRF2D3W0D1 207 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 RIOK3O14730 519 aaKnown RBP14.25□□□□□ -0.13
CHD4-211ENST00000544484 PDE6BP35913 854 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 ADKP55263 362 aaKnown RBP14.25□□□□□ -0.13
CHD4-211ENST00000544484 CCDC6Q16204 474 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 CLIC6Q96NY7 704 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 SPATA31E1Q6ZUB1 1445 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 IRX5P78411 483 aaPredicted RBP14.25□□□□□ -0.13
CHD4-211ENST00000544484 LRMPQ12912 555 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 AZI2Q9H6S1 392 aa14.25□□□□□ -0.13
CHD4-211ENST00000544484 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.25□□□□□ -0.13
CHD4-211ENST00000544484 SAMD9Q5K651 1589 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 PFKFB2O60825 505 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 ARHGAP44Q17R89 818 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 C8orf74Q6P047 294 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 COPRSQ9NQ92 184 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 RRAGDQ9NQL2 400 aaPredicted RBP14.24□□□□□ -0.13
CHD4-211ENST00000544484 CCDC26Q8TAB7 109 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 SECISBP2LQ93073 1101 aaKnown RBP14.24□□□□□ -0.13
CHD4-211ENST00000544484 SEC31BQ9NQW1 1179 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 CTTNBP2NLQ9P2B4 639 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 MNAT1P51948 309 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 FMNL3Q8IVF7 1028 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 TRIM6Q9C030 488 aaPredicted RBP14.24□□□□□ -0.13
CHD4-211ENST00000544484 USTQ9Y2C2 406 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 FAM169AQ9Y6X4 670 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 MLH3Q9UHC1 1453 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 GAS7O60861 476 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 KLHL30Q0D2K2 578 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 PRR16Q569H4 304 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 KRT19P08727 400 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 C2CD5Q86YS7 1000 aa14.24□□□□□ -0.13
CHD4-211ENST00000544484 ERVK-7P63135 1459 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 TESPA1A2RU30 521 aaPredicted RBP14.23□□□□□ -0.13
CHD4-211ENST00000544484 ERO1AQ96HE7 468 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 ANTXR1Q9H6X2 564 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 PSTPIP2Q9H939 334 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 KIAA1468Q9P260 1216 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 ALAS1P13196 640 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 ATP2B4P23634 1241 aa14.23□□□□□ -0.13
CHD4-211ENST00000544484 HPDP32754 393 aaPredicted RBP14.23□□□□□ -0.13
CHD4-211ENST00000544484 IRX3P78415 501 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms