RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 A0A1W2PQ27 194 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 A0A1W2PQ64 194 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 A0A1W2PQD8 194 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 KRT2P35908 639 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 UBASH3AP57075 661 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 VPS72Q15906 364 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 TYW1BQ6NUM6 668 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 CATIPQ7Z7H3 387 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 MYRIPQ8NFW9 859 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 NAT10Q9H0A0 1025 aaKnown RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 FAM170AA1A519 330 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 KARSQ15046 597 aaKnown RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 USP17L2Q6R6M4 530 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 SYT10Q6XYQ8 523 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 UBA5Q9GZZ9 404 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 KAT14Q9H8E8 782 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 NWD2Q9ULI1 1742 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 TSPY3P0CV98 308 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 TSPY8P0CW00 308 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 TAL1P17542 331 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 GTF2IP78347 998 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 ATP2B2Q01814 1243 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 AFDNP55196 1824 aaKnown RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 CTAGE5O15320 804 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 MRFAP1L1Q96HT8 127 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 NYXQ9GZU5 481 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 BIN2Q9UBW5 565 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 DOT1LQ8TEK3 1739 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 PES1O00541 588 aaKnown RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 PDIA4P13667 645 aaKnown RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 DPYDQ12882 1025 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 TMEM260Q9NX78 707 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 NHSL1Q5SYE7 1610 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 UBR2Q8IWV8 1755 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 CNTNAP5Q8WYK1 1306 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 SNAP25P60880 206 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 TCP10Q12799 353 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 CUL4BQ13620 913 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 POSTNQ15063 836 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 RCSD1Q6JBY9 416 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 RASSF8Q8NHQ8 419 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 BRIP1Q9BX63 1249 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 EPC1Q9H2F5 836 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 GYS1P13807 737 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 GRAPQ13588 217 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 CEP135Q66GS9 1140 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 PNMA1Q8ND90 353 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 GRAPLQ8TC17 118 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 DBNDD1Q9H9R9 158 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 TRIM49BA6NDI0 452 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 PTGDRQ13258 359 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 NPY5RQ15761 445 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 SMARCE1Q969G3 411 aa4.31□□□□□ -1.72
BRCA2-206ENST00000544455 GJD4Q96KN9 370 aaPredicted RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 SCAF8Q9UPN6 1271 aaKnown RBP4.31□□□□□ -1.72
BRCA2-206ENST00000544455 TEX33O43247 280 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 PRPF3O43395 683 aaKnown RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 ACTN4O43707 911 aaKnown RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 ATL3Q6DD88 541 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 INTS13Q9NVM9 706 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 MTF1Q14872 753 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 INF2Q27J81 1249 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 E4F1Q66K89 784 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 LRRC47Q8N1G4 583 aaKnown RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 WASF1Q92558 559 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 DESI2Q9BSY9 194 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 QTRT2Q9H974 415 aaKnown RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 CTNND2Q9UQB3 1225 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 TRIM75PA6NK02 468 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 SLC16A2P36021 539 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 MYL5Q02045 173 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 TUBE1Q9UJT0 475 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 UTRNP46939 3433 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 PTPREP23469 700 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 CCT6AP40227 531 aaKnown RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 ZNF444Q8N0Y2 327 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 CTCFLQ8NI51 663 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 COL14A1Q05707 1796 aaKnown RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 SARM1Q6SZW1 724 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 ZNF804AQ7Z570 1209 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 TMTC2Q8N394 836 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 PIGSQ96S52 555 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 VPS16Q9H269 839 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 NKRFO15226 690 aaKnown RBP eCLIP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 SCG2P13521 617 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 PPP4R3BQ5MIZ7 849 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 MFSD14BQ5SR56 506 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 C12orf60Q5U649 245 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 WWC2Q6AWC2 1192 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 JMYQ8N9B5 988 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 PAGE5Q96GU1 130 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 SPTLC3Q9NUV7 552 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 WDR19Q8NEZ3 1342 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 CCDC196A0A1B0GTZ2 297 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 MPHOSPH10O00566 681 aaKnown RBP4.3□□□□□ -1.72
BRCA2-206ENST00000544455 FANCGO15287 622 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 DDR1Q08345 913 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 TTC38Q5R3I4 469 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 TOGARAM2Q6ZUX3 1019 aa4.3□□□□□ -1.72
BRCA2-206ENST00000544455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms