RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TRIM43Q96BQ3 446 aaPredicted RBP11.68□□□□□ -0.54
C2CD3-220ENST00000544293 PIH1D3Q9NQM4 214 aaKnown RBP11.68□□□□□ -0.54
C2CD3-220ENST00000544293 LRP2BPQ9P2M1 347 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 SAP30BPQ9UHR5 308 aaKnown RBP11.68□□□□□ -0.54
C2CD3-220ENST00000544293 LOC285556D6RIA3 1793 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 TTC28Q96AY4 2481 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
C2CD3-220ENST00000544293 DOCK2Q92608 1830 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 LAMA2P24043 3122 aaKnown RBP11.67□□□□□ -0.54
C2CD3-220ENST00000544293 MYH2Q9UKX2 1941 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 SLC15A5A6NIM6 579 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L15C9J2P7 530 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L13C9JLJ4 530 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L11C9JVI0 530 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L18D6R9N7 530 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L22D6RA61 530 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L17D6RBQ6 530 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L19D6RCP7 530 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L20D6RJB6 530 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 DNM1LO00429 736 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 COBLO75128 1261 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 EPHB4P54760 987 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 USP17L24Q0WX57 530 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 SNX17Q15036 470 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
C2CD3-220ENST00000544293 NAA16Q6N069 864 aaPredicted RBP11.67□□□□□ -0.54
C2CD3-220ENST00000544293 SLC39A5Q6ZMH5 540 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 DBNDD2Q9BQY9 259 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 API5Q9BZZ5 524 aaKnown RBP11.67□□□□□ -0.54
C2CD3-220ENST00000544293 CDH23Q9H251 3354 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 EYSQ5T1H1 3165 aa11.67□□□□□ -0.54
C2CD3-220ENST00000544293 SPDYE16A6NNV3 312 aaPredicted RBP11.66□□□□□ -0.54
C2CD3-220ENST00000544293 BAG3O95817 575 aa11.66□□□□□ -0.54
C2CD3-220ENST00000544293 RARSP54136 660 aaKnown RBP11.66□□□□□ -0.54
C2CD3-220ENST00000544293 EVX2Q03828 476 aa11.66□□□□□ -0.54
C2CD3-220ENST00000544293 KIAA1755Q5JYT7 1200 aa11.66□□□□□ -0.54
C2CD3-220ENST00000544293 ZNF697Q5TEC3 545 aa11.66□□□□□ -0.54
C2CD3-220ENST00000544293 MFSD14CQ5VZR4 134 aa11.66□□□□□ -0.54
C2CD3-220ENST00000544293 GTF3C2Q8WUA4 911 aaPredicted RBP11.66□□□□□ -0.54
C2CD3-220ENST00000544293 MYLIPQ8WY64 445 aa11.66□□□□□ -0.54
C2CD3-220ENST00000544293 BADQ92934 168 aa11.66□□□□□ -0.54
C2CD3-220ENST00000544293 LBHD1Q9BQE6 289 aaPredicted RBP11.66□□□□□ -0.54
C2CD3-220ENST00000544293 PRDM6Q9NQX0 595 aa11.66□□□□□ -0.54
C2CD3-220ENST00000544293 A0A1W2PRG0 241 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 UQCRFS1P1P0C7P4 283 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 VCAM1P19320 739 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 ZAP70P43403 619 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 ATP2B2Q01814 1243 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 ZYXQ15942 572 aaKnown RBP11.65□□□□□ -0.54
C2CD3-220ENST00000544293 PRAMEF19Q5SWL8 479 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 ANO1Q5XXA6 986 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 MAFAQ8NHW3 353 aaPredicted RBP11.65□□□□□ -0.54
C2CD3-220ENST00000544293 ARHGAP45Q92619 1136 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 KIAA1683Q9H0B3 1180 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 HDAC5Q9UQL6 1122 aa11.65□□□□□ -0.54
C2CD3-220ENST00000544293 SIPA1L1O43166 1804 aa11.65□□□□□ -0.55
C2CD3-220ENST00000544293 MYH13Q9UKX3 1938 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 GNAI3P08754 354 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 PLCG2P16885 1265 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 CNGA1P29973 690 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 SHMT1P34896 483 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 PLCD1P51178 756 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 SMAD3P84022 425 aaKnown RBP11.64□□□□□ -0.55
C2CD3-220ENST00000544293 TRIM60Q495X7 471 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 TNNI3KQ59H18 835 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 GORABQ5T7V8 394 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 SIAH1Q8IUQ4 282 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
C2CD3-220ENST00000544293 CRACR2BQ8N4Y2 399 aaPredicted RBP11.64□□□□□ -0.55
C2CD3-220ENST00000544293 USP38Q8NB14 1042 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 ZNF512BQ96KM6 892 aaPredicted RBP11.64□□□□□ -0.55
C2CD3-220ENST00000544293 MOV10L1Q9BXT6 1211 aaKnown RBP11.64□□□□□ -0.55
C2CD3-220ENST00000544293 PDLIM7Q9NR12 457 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 ATP11BQ9Y2G3 1177 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 FPGT-TNNI3KV9GXZ4 949 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 PRUNE2Q8WUY3 3088 aa11.64□□□□□ -0.55
C2CD3-220ENST00000544293 MUC3AQ02505 3323 aa11.63□□□□□ -0.55
C2CD3-220ENST00000544293 MSCO60682 206 aa11.63□□□□□ -0.55
C2CD3-220ENST00000544293 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
C2CD3-220ENST00000544293 CCNA1P78396 465 aa11.63□□□□□ -0.55
C2CD3-220ENST00000544293 GABPAQ06546 454 aa11.63□□□□□ -0.55
C2CD3-220ENST00000544293 C1orf53Q5VUE5 145 aa11.63□□□□□ -0.55
C2CD3-220ENST00000544293 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
C2CD3-220ENST00000544293 EHD4Q9H223 541 aa11.63□□□□□ -0.55
C2CD3-220ENST00000544293 RPAP3Q9H6T3 665 aaPredicted RBP11.63□□□□□ -0.55
C2CD3-220ENST00000544293 ANTXR1Q9H6X2 564 aa11.63□□□□□ -0.55
C2CD3-220ENST00000544293 GPR108Q9NPR9 543 aa11.63□□□□□ -0.55
C2CD3-220ENST00000544293 TLR7Q9NYK1 1049 aaKnown RBP11.63□□□□□ -0.55
C2CD3-220ENST00000544293 CYP7A1P22680 504 aa11.62□□□□□ -0.55
C2CD3-220ENST00000544293 ADORA2AP29274 412 aa11.62□□□□□ -0.55
C2CD3-220ENST00000544293 ADCYAP1R1P41586 468 aa11.62□□□□□ -0.55
C2CD3-220ENST00000544293 G3BP1Q13283 466 aaKnown RBP eCLIP11.62□□□□□ -0.55
C2CD3-220ENST00000544293 GRIN2CQ14957 1233 aa11.62□□□□□ -0.55
C2CD3-220ENST00000544293 RAB3GAP1Q15042 981 aa11.62□□□□□ -0.55
C2CD3-220ENST00000544293 LRRC41Q15345 812 aa11.62□□□□□ -0.55
C2CD3-220ENST00000544293 WDR78Q5VTH9 848 aa11.62□□□□□ -0.55
C2CD3-220ENST00000544293 MIGA1Q8NAN2 632 aa11.62□□□□□ -0.55
C2CD3-220ENST00000544293 FERMT2Q96AC1 680 aa11.62□□□□□ -0.55
C2CD3-220ENST00000544293 DBNLQ9UJU6 430 aaKnown RBP11.62□□□□□ -0.55
C2CD3-220ENST00000544293 SEPT4O43236 478 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms