RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 ORC4O43929 436 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 RANBP6O60518 1105 aaKnown RBP11.2□□□□□ -0.62
SP140-214ENST00000544128 KDM4AO75164 1064 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 HMGB1P09429 215 aaKnown RBP11.2□□□□□ -0.62
SP140-214ENST00000544128 FGRP09769 529 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 FAM47AQ5JRC9 791 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 DLK2Q6UY11 383 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 RUFY3Q7L099 469 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 CYB5R4Q7L1T6 521 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 MIGA2Q7L4E1 593 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 CHST3Q7LGC8 479 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 KRT26Q7Z3Y9 468 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 MB21D2Q8IYB1 491 aaPredicted RBP11.2□□□□□ -0.62
SP140-214ENST00000544128 ZNF444Q8N0Y2 327 aaPredicted RBP11.2□□□□□ -0.62
SP140-214ENST00000544128 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.2□□□□□ -0.62
SP140-214ENST00000544128 ZNF287Q9HBT7 754 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 SWAP70Q9UH65 585 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 TSKSQ9UJT2 592 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 RBM19Q9Y4C8 960 aaKnown RBP11.2□□□□□ -0.62
SP140-214ENST00000544128 PPP2R3BQ9Y5P8 575 aa11.2□□□□□ -0.62
SP140-214ENST00000544128 PCP11498 1178 aaKnown RBP11.19□□□□□ -0.62
SP140-214ENST00000544128 RASA1P20936 1047 aa11.19□□□□□ -0.62
SP140-214ENST00000544128 RPS6KB1P23443 525 aa11.19□□□□□ -0.62
SP140-214ENST00000544128 MCM5P33992 734 aa11.19□□□□□ -0.62
SP140-214ENST00000544128 SHMT1P34896 483 aa11.19□□□□□ -0.62
SP140-214ENST00000544128 MAP1SQ66K74 1059 aaPredicted RBP11.19□□□□□ -0.62
SP140-214ENST00000544128 DHX32Q7L7V1 743 aaKnown RBP11.19□□□□□ -0.62
SP140-214ENST00000544128 METTL16Q86W50 562 aaKnown RBP11.19□□□□□ -0.62
SP140-214ENST00000544128 ESR2Q92731 530 aa11.19□□□□□ -0.62
SP140-214ENST00000544128 TCEANC2Q96MN5 208 aa11.19□□□□□ -0.62
SP140-214ENST00000544128 GLIS2Q9BZE0 524 aaPredicted RBP11.19□□□□□ -0.62
SP140-214ENST00000544128 DNAJC18Q9H819 358 aa11.19□□□□□ -0.62
SP140-214ENST00000544128 PDRG1Q9NUG6 133 aa11.19□□□□□ -0.62
SP140-214ENST00000544128 ZSWIM5Q9P217 1185 aa11.19□□□□□ -0.62
SP140-214ENST00000544128 HERC5Q9UII4 1024 aaKnown RBP11.19□□□□□ -0.62
SP140-214ENST00000544128 MYH8P13535 1937 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 TSPY2A6NKD2 308 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 PRC1O43663 620 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 TBC1D12O60347 775 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 ANTXR2P58335 489 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 TFAP4Q01664 338 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 EXOSC10Q01780 885 aaKnown RBP11.18□□□□□ -0.62
SP140-214ENST00000544128 SUPT20HL1Q3ZLR7 823 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 CERKLQ49MI3 558 aaPredicted RBP11.18□□□□□ -0.62
SP140-214ENST00000544128 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
SP140-214ENST00000544128 CDC37L1Q7L3B6 337 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 LDHDQ86WU2 507 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 HOOK2Q96ED9 719 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 ZKSCAN3Q9BRR0 538 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 LRRC2Q9BYS8 371 aa11.18□□□□□ -0.62
SP140-214ENST00000544128 MPHOSPH10O00566 681 aaKnown RBP11.17□□□□□ -0.62
SP140-214ENST00000544128 IFIT3O14879 490 aaKnown RBP11.17□□□□□ -0.62
SP140-214ENST00000544128 TSPY3P0CV98 308 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 TSPY8P0CW00 308 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 AKR1B1P15121 316 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 FGD1P98174 961 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 MAP3K10Q02779 954 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 DCAF15Q66K64 600 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 TATDN1Q6P1N9 297 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 Q6ZUG5 572 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 CDCA5Q96FF9 252 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 TTC14Q96N46 770 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 BEGAINQ9BUH8 593 aa11.17□□□□□ -0.62
SP140-214ENST00000544128 ST18O60284 1047 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 NMT2O60551 498 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 GDF11O95390 407 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 PRKG1Q13976 671 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 RRP1BQ14684 758 aaKnown RBP11.16□□□□□ -0.62
SP140-214ENST00000544128 NOL8Q76FK4 1167 aaKnown RBP11.16□□□□□ -0.62
SP140-214ENST00000544128 IQCA1Q86XH1 822 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 NEDD1Q8NHV4 660 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 CCDC17Q96LX7 622 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 ZSCAN10Q96SZ4 725 aaPredicted RBP11.16□□□□□ -0.62
SP140-214ENST00000544128 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 ZNF341Q9BYN7 854 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 GPHNQ9NQX3 736 aaPredicted RBP11.16□□□□□ -0.62
SP140-214ENST00000544128 ABT1Q9ULW3 272 aaKnown RBP11.16□□□□□ -0.62
SP140-214ENST00000544128 FZD1Q9UP38 647 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 THSD7BQ9C0I4 1608 aa11.16□□□□□ -0.62
SP140-214ENST00000544128 WDR19Q8NEZ3 1342 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 ERICH2A1L162 156 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 TRAF5O00463 557 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 TRIM66O15016 1216 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 CD2BP2O95400 341 aaKnown RBP11.15□□□□□ -0.62
SP140-214ENST00000544128 PRKAR2AP13861 404 aaKnown RBP11.15□□□□□ -0.62
SP140-214ENST00000544128 NF2P35240 595 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 ANP32AP39687 249 aaKnown RBP11.15□□□□□ -0.62
SP140-214ENST00000544128 MLLT3P42568 568 aaPredicted RBP11.15□□□□□ -0.62
SP140-214ENST00000544128 NT5C2P49902 561 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 AK2P54819 239 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 JAG1P78504 1218 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 FMR1Q06787 632 aaKnown RBP eCLIP11.15□□□□□ -0.62
SP140-214ENST00000544128 PDE4DQ08499 809 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 DGKZQ13574 1117 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 TOB2Q14106 344 aaPredicted RBP11.15□□□□□ -0.62
SP140-214ENST00000544128 SART3Q15020 963 aaKnown RBP11.15□□□□□ -0.62
SP140-214ENST00000544128 ABCB5Q2M3G0 1257 aa11.15□□□□□ -0.62
SP140-214ENST00000544128 SHROOM1Q2M3G4 852 aaPredicted RBP11.15□□□□□ -0.62
SP140-214ENST00000544128 TMEM67Q5HYA8 995 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms