RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 CLEC10AQ8IUN9 316 aa17.09■□□□□ 0.33
TNFRSF1A-216ENST00000543995 FEZ1Q99689 392 aa17.09■□□□□ 0.33
TNFRSF1A-216ENST00000543995 ARHGEF10LQ9HCE6 1279 aa17.09■□□□□ 0.33
TNFRSF1A-216ENST00000543995 AFG3L2Q9Y4W6 797 aa17.09■□□□□ 0.33
TNFRSF1A-216ENST00000543995 WDR33Q9C0J8 1336 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-216ENST00000543995 VEGFBP49765 207 aa17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 NOGQ13253 232 aa17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 KRT32Q14532 448 aa17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 IQCA1Q86XH1 822 aa17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 RASEFQ8IZ41 740 aa17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CEP95Q96GE4 821 aa17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 PLIN4Q96Q06 1357 aa17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 MYH4Q9Y623 1939 aa17.08■□□□□ 0.32
TNFRSF1A-216ENST00000543995 USP17L10C9JJH3 530 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 NMT2O60551 498 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 GTF2A2P52657 109 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 SNAPC2Q13487 334 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 NKX2-3Q8TAU0 364 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 ZKSCAN3Q9BRR0 538 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 WDR18Q9BV38 432 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 UPF2Q9HAU5 1272 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 STX8Q9UNK0 236 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 SNX14Q9Y5W7 946 aa17.07■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CXCL11O14625 94 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 AOC2O75106 756 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 TTLL1O95922 423 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 EEF2P13639 858 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 MTMR2Q13614 643 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 KCNB2Q92953 911 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 NEK1Q96PY6 1258 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 UBAC1Q9BSL1 405 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 IL17RBQ9NRM6 502 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 MTMR4Q9NYA4 1195 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 PTPRFP10586 1907 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 IGKV6D-41A0A0C4DH26 115 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 MANSC4A6NHS7 340 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 BACE1P56817 501 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 KIF23Q02241 960 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 ZYXQ15942 572 aaKnown RBP17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CYB5R4Q7L1T6 521 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 ACER1Q8TDN7 264 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 SH2D4AQ9H788 454 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 TCP11L1Q9NUJ3 509 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 KCNH4Q9UQ05 1017 aa17.06■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CCL15-CCL14A0A0B4J2E2 113 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 C19orf81C9J6K1 198 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 RAD21O60216 631 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CETPP11597 493 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 HMGCS2P54868 508 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 SREBF2Q12772 1141 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CCL15Q16663 113 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 ADCK5Q3MIX3 580 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CCDC178Q5BJE1 867 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 GADL1Q6ZQY3 521 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CHST3Q7LGC8 479 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 MB21D2Q8IYB1 491 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 ZSCAN10Q96SZ4 725 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 TMOD4Q9NZQ9 345 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 NYAP2Q9P242 653 aa17.05■□□□□ 0.32
TNFRSF1A-216ENST00000543995 A0A0G2JLL6 359 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 A0A1W2PRG0 241 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 ERICH2A1L162 156 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 PSMA5P28066 241 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 MCM5P33992 734 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 USP14P54578 494 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 SART3Q15020 963 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 USP17L2Q6R6M4 530 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 PRRT2Q7Z6L0 340 aaPredicted RBP17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 SIAH1Q8IUQ4 282 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 MS4A4AQ96JQ5 239 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 ZIC5Q96T25 663 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 BACH2Q9BYV9 841 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 KIAA1683Q9H0B3 1180 aa17.04■□□□□ 0.32
TNFRSF1A-216ENST00000543995 TNKSO95271 1327 aa17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 IFIT3O14879 490 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 PRC1O43663 620 aa17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 MAP2K2P36507 400 aa17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 DGKZQ13574 1117 aa17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 FASTKD5Q7L8L6 764 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 LRRC47Q8N1G4 583 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 GOPCQ9HD26 462 aa17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 TMX2Q9Y320 296 aa17.03■□□□□ 0.32
TNFRSF1A-216ENST00000543995 CASTP20810 708 aaKnown RBP17.02■□□□□ 0.32
TNFRSF1A-216ENST00000543995 INHBEP58166 350 aa17.02■□□□□ 0.32
TNFRSF1A-216ENST00000543995 BLOC1S2Q6QNY1 142 aa17.02■□□□□ 0.32
TNFRSF1A-216ENST00000543995 TTC14Q96N46 770 aa17.02■□□□□ 0.32
TNFRSF1A-216ENST00000543995 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.32
TNFRSF1A-216ENST00000543995 ANTXR2P58335 489 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 ANAPC15P60006 121 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 TMEM67Q5HYA8 995 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 IFIT1BQ5T764 474 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-216ENST00000543995 DHX32Q7L7V1 743 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms