RNA–Protein interactions for RNA: ENST00000543991.1

SMCO2-206, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 486 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-206ENST00000543991 AP4E1Q9UPM8 1137 aa9.37□□□□□ -0.91
SMCO2-206ENST00000543991 SPATA31D1Q6ZQQ2 1576 aa9.37□□□□□ -0.91
SMCO2-206ENST00000543991 LTBP3Q9NS15 1303 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 PLB1Q6P1J6 1458 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 B2RBV5 119 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 ENPP3O14638 875 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 ARHGEF15O94989 841 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 RAG1P15918 1043 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 SLC6A19Q695T7 634 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.36□□□□□ -0.91
SMCO2-206ENST00000543991 MRPL41Q8IXM3 137 aaKnown RBP9.36□□□□□ -0.91
SMCO2-206ENST00000543991 SLFN12Q8IYM2 578 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 KCT2Q8NC54 265 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 MKL2Q9ULH7 1088 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 SBNO2Q9Y2G9 1366 aa9.36□□□□□ -0.91
SMCO2-206ENST00000543991 UPK3BL1B0FP48 263 aa9.35□□□□□ -0.91
SMCO2-206ENST00000543991 UPK3BL2E5RIL1 263 aa9.35□□□□□ -0.91
SMCO2-206ENST00000543991 CLSTN1O94985 981 aa9.35□□□□□ -0.91
SMCO2-206ENST00000543991 CHMP4BP1P59074 171 aa9.35□□□□□ -0.91
SMCO2-206ENST00000543991 NCAPHQ15003 741 aa9.35□□□□□ -0.91
SMCO2-206ENST00000543991 CDC37L1Q7L3B6 337 aa9.35□□□□□ -0.91
SMCO2-206ENST00000543991 LILRB2Q8N423 598 aa9.35□□□□□ -0.91
SMCO2-206ENST00000543991 GSX1Q9H4S2 264 aaPredicted RBP9.35□□□□□ -0.91
SMCO2-206ENST00000543991 FAM229AH3BQW9 127 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 TIAF1O95411 115 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 DRD2P14416 443 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 CCNFP41002 786 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 TTLL4Q14679 1199 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 MTERF2Q49AM1 385 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 VHLLQ6RSH7 139 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 TREML4Q6UXN2 200 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 DYMQ7RTS9 669 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 C12orf50Q8NA57 414 aaPredicted RBP9.34□□□□□ -0.91
SMCO2-206ENST00000543991 ST13P5Q8NFI4 369 aaPredicted RBP9.34□□□□□ -0.91
SMCO2-206ENST00000543991 SH3TC2Q8TF17 1288 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 FBRSQ9HAH7 460 aa9.34□□□□□ -0.91
SMCO2-206ENST00000543991 PPRC1Q5VV67 1664 aaKnown RBP9.34□□□□□ -0.91
SMCO2-206ENST00000543991 ASXL2Q76L83 1435 aa9.33□□□□□ -0.92
SMCO2-206ENST00000543991 NEFMP07197 916 aa9.33□□□□□ -0.92
SMCO2-206ENST00000543991 CAP2P40123 477 aa9.33□□□□□ -0.92
SMCO2-206ENST00000543991 PRRT3Q5FWE3 981 aa9.33□□□□□ -0.92
SMCO2-206ENST00000543991 ANKRD34AQ69YU3 496 aa9.33□□□□□ -0.92
SMCO2-206ENST00000543991 FDX2Q6P4F2 183 aa9.33□□□□□ -0.92
SMCO2-206ENST00000543991 TMEM130Q8N3G9 435 aa9.33□□□□□ -0.92
SMCO2-206ENST00000543991 ZNF669Q96BR6 464 aaPredicted RBP9.33□□□□□ -0.92
SMCO2-206ENST00000543991 ZNF775Q96BV0 537 aaPredicted RBP9.33□□□□□ -0.92
SMCO2-206ENST00000543991 PIDD1Q9HB75 910 aa9.33□□□□□ -0.92
SMCO2-206ENST00000543991 ZNF214Q9UL59 606 aaPredicted RBP9.33□□□□□ -0.92
SMCO2-206ENST00000543991 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMCO2-206ENST00000543991 FAM86C2PA6NEL3 165 aa9.32□□□□□ -0.92
SMCO2-206ENST00000543991 RGS13O14921 159 aa9.32□□□□□ -0.92
SMCO2-206ENST00000543991 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
SMCO2-206ENST00000543991 ASPAP45381 313 aa9.32□□□□□ -0.92
SMCO2-206ENST00000543991 NKG7Q16617 165 aa9.32□□□□□ -0.92
SMCO2-206ENST00000543991 MRM1Q6IN84 353 aaKnown RBP9.32□□□□□ -0.92
SMCO2-206ENST00000543991 EEPD1Q7L9B9 569 aa9.32□□□□□ -0.92
SMCO2-206ENST00000543991 PHACTR4Q8IZ21 702 aa9.32□□□□□ -0.92
SMCO2-206ENST00000543991 DHRS1Q96LJ7 313 aa9.32□□□□□ -0.92
SMCO2-206ENST00000543991 NOP53Q9NZM5 478 aaKnown RBP9.32□□□□□ -0.92
SMCO2-206ENST00000543991 PCDHB10Q9UN67 800 aa9.32□□□□□ -0.92
SMCO2-206ENST00000543991 F8W735 103 aaPredicted RBP9.31□□□□□ -0.92
SMCO2-206ENST00000543991 RNGTTO60942 597 aaKnown RBP9.31□□□□□ -0.92
SMCO2-206ENST00000543991 POLR2BP30876 1174 aaKnown RBP9.31□□□□□ -0.92
SMCO2-206ENST00000543991 SLC7A5Q01650 507 aa9.31□□□□□ -0.92
SMCO2-206ENST00000543991 SLBPQ14493 270 aaKnown RBP eCLIP9.31□□□□□ -0.92
SMCO2-206ENST00000543991 C2CD4AQ8NCU7 369 aaPredicted RBP9.31□□□□□ -0.92
SMCO2-206ENST00000543991 ISL2Q96A47 359 aa9.31□□□□□ -0.92
SMCO2-206ENST00000543991 CCDC74BQ96LY2 380 aa9.31□□□□□ -0.92
SMCO2-206ENST00000543991 KIF2CQ99661 725 aa9.31□□□□□ -0.92
SMCO2-206ENST00000543991 PTPRMP28827 1452 aa9.31□□□□□ -0.92
SMCO2-206ENST00000543991 PCF11O94913 1555 aaKnown RBP9.31□□□□□ -0.92
SMCO2-206ENST00000543991 CST3P01034 146 aaPredicted RBP9.3□□□□□ -0.92
SMCO2-206ENST00000543991 BBS9Q3SYG4 887 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 GNPTABQ3T906 1256 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 KIAA1211LQ6NV74 962 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 UBE3DQ7Z6J8 389 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 KLHL6Q8WZ60 621 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 KANSL2Q9H9L4 492 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 SSU72Q9NP77 194 aaKnown RBP9.3□□□□□ -0.92
SMCO2-206ENST00000543991 FAM105AQ9NUU6 356 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 ZMYM5Q9UJ78 669 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 ACTL7BQ9Y614 415 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 ABCC2Q92887 1545 aa9.3□□□□□ -0.92
SMCO2-206ENST00000543991 GBP1P32455 592 aa9.29□□□□□ -0.92
SMCO2-206ENST00000543991 PMS1P54277 932 aaKnown RBP9.29□□□□□ -0.92
SMCO2-206ENST00000543991 C2orf27AQ580R0 203 aa9.29□□□□□ -0.92
SMCO2-206ENST00000543991 PLEKHG4Q58EX7 1191 aa9.29□□□□□ -0.92
SMCO2-206ENST00000543991 LCE2AQ5TA79 106 aaPredicted RBP9.29□□□□□ -0.92
SMCO2-206ENST00000543991 SPATC1Q76KD6 591 aa9.29□□□□□ -0.92
SMCO2-206ENST00000543991 SMYD4Q8IYR2 804 aaPredicted RBP9.29□□□□□ -0.92
SMCO2-206ENST00000543991 AGGF1Q8N302 714 aaeCLIP9.29□□□□□ -0.92
SMCO2-206ENST00000543991 JMYQ8N9B5 988 aa9.29□□□□□ -0.92
SMCO2-206ENST00000543991 THAP3Q8WTV1 239 aaPredicted RBP9.29□□□□□ -0.92
SMCO2-206ENST00000543991 CYB5D2Q8WUJ1 264 aa9.29□□□□□ -0.92
SMCO2-206ENST00000543991 DPH2Q9BQC3 489 aaPredicted RBP9.29□□□□□ -0.92
SMCO2-206ENST00000543991 PFDN2Q9UHV9 154 aa9.29□□□□□ -0.92
SMCO2-206ENST00000543991 ERICH3Q5RHP9 1530 aa9.29□□□□□ -0.92
SMCO2-206ENST00000543991 KDM2BQ8NHM5 1336 aa9.29□□□□□ -0.92
SMCO2-206ENST00000543991 DIAPH1O60610 1272 aaKnown RBP9.28□□□□□ -0.92
SMCO2-206ENST00000543991 CDC45O75419 566 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms