RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 CRHR2Q13324 411 aa21.27■■□□□ 1
TSFM-208ENST00000543727 MTMR2Q13614 643 aa21.27■■□□□ 1
TSFM-208ENST00000543727 C12orf42Q96LP6 360 aa21.27■■□□□ 1
TSFM-208ENST00000543727 PNMA3Q9UL41 463 aa21.27■■□□□ 1
TSFM-208ENST00000543727 PDHXO00330 501 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 TBC1D8O95759 1140 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 RASA1P20936 1047 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 GUCY1A2P33402 732 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 HMGCS2P54868 508 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 SHROOM1Q2M3G4 852 aaPredicted RBP21.26■□□□□ 0.99
TSFM-208ENST00000543727 PPP4R3BQ5MIZ7 849 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 GPAT2Q6NUI2 795 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 USP17L2Q6R6M4 530 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 GADL1Q6ZQY3 521 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 CCDC84Q86UT8 332 aaPredicted RBP21.26■□□□□ 0.99
TSFM-208ENST00000543727 FEZ1Q99689 392 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 KANSL2Q9H9L4 492 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 ARHGEF10LQ9HCE6 1279 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 CTNNA3Q9UI47 895 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 TSKSQ9UJT2 592 aa21.26■□□□□ 0.99
TSFM-208ENST00000543727 GPR25O00155 361 aa21.25■□□□□ 0.99
TSFM-208ENST00000543727 TLR2O60603 784 aa21.25■□□□□ 0.99
TSFM-208ENST00000543727 AKR1B1P15121 316 aa21.25■□□□□ 0.99
TSFM-208ENST00000543727 ICA1Q05084 483 aa21.25■□□□□ 0.99
TSFM-208ENST00000543727 SEPT2Q15019 361 aa21.25■□□□□ 0.99
TSFM-208ENST00000543727 ZNF444Q8N0Y2 327 aaPredicted RBP21.25■□□□□ 0.99
TSFM-208ENST00000543727 SMIM22K7EJ46 135 aa21.24■□□□□ 0.99
TSFM-208ENST00000543727 FGRP09769 529 aa21.24■□□□□ 0.99
TSFM-208ENST00000543727 SYNPO2Q9UMS6 1093 aa21.24■□□□□ 0.99
TSFM-208ENST00000543727 SGSM2O43147 1006 aa21.23■□□□□ 0.99
TSFM-208ENST00000543727 ORC4O43929 436 aa21.23■□□□□ 0.99
TSFM-208ENST00000543727 FKTNO75072 461 aa21.23■□□□□ 0.99
TSFM-208ENST00000543727 HOXA7P31268 230 aaPredicted RBP21.23■□□□□ 0.99
TSFM-208ENST00000543727 CASC1Q6TDU7 716 aa21.23■□□□□ 0.99
TSFM-208ENST00000543727 LPAR1Q92633 364 aa21.23■□□□□ 0.99
TSFM-208ENST00000543727 RNF41Q9H4P4 317 aaPredicted RBP21.23■□□□□ 0.99
TSFM-208ENST00000543727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.23■□□□□ 0.99
TSFM-208ENST00000543727 MGAMO43451 1857 aa21.23■□□□□ 0.99
TSFM-208ENST00000543727 PARP14Q460N5 1801 aa21.22■□□□□ 0.99
TSFM-208ENST00000543727 ZNF296Q8WUU4 475 aaPredicted RBP21.22■□□□□ 0.99
TSFM-208ENST00000543727 TMX2Q9Y320 296 aa21.22■□□□□ 0.99
TSFM-208ENST00000543727 ADGRA2Q96PE1 1338 aa21.22■□□□□ 0.99
TSFM-208ENST00000543727 OSBPP22059 807 aa21.21■□□□□ 0.99
TSFM-208ENST00000543727 IMMTQ16891 758 aaKnown RBP21.21■□□□□ 0.99
TSFM-208ENST00000543727 GTF3C2Q8WUA4 911 aaPredicted RBP21.21■□□□□ 0.99
TSFM-208ENST00000543727 ERO1AQ96HE7 468 aa21.21■□□□□ 0.99
TSFM-208ENST00000543727 NYAP2Q9P242 653 aa21.21■□□□□ 0.99
TSFM-208ENST00000543727 ZNF213O14771 459 aa21.2■□□□□ 0.98
TSFM-208ENST00000543727 TSPY3P0CV98 308 aa21.2■□□□□ 0.98
TSFM-208ENST00000543727 TSPY8P0CW00 308 aa21.2■□□□□ 0.98
TSFM-208ENST00000543727 GCLCP48506 637 aaPredicted RBP21.2■□□□□ 0.98
TSFM-208ENST00000543727 ARHGEF6Q15052 776 aa21.2■□□□□ 0.98
TSFM-208ENST00000543727 TREML2Q5T2D2 321 aa21.2■□□□□ 0.98
TSFM-208ENST00000543727 NEDD1Q8NHV4 660 aa21.2■□□□□ 0.98
TSFM-208ENST00000543727 STAG1Q8WVM7 1258 aa21.2■□□□□ 0.98
TSFM-208ENST00000543727 EMILIN3Q9NT22 766 aa21.2■□□□□ 0.98
TSFM-208ENST00000543727 IGKV6D-41A0A0C4DH26 115 aa21.19■□□□□ 0.98
TSFM-208ENST00000543727 SP3Q02447 781 aa21.19■□□□□ 0.98
TSFM-208ENST00000543727 CTDSPL2Q05D32 466 aa21.19■□□□□ 0.98
TSFM-208ENST00000543727 AKNAD1Q5T1N1 836 aa21.19■□□□□ 0.98
TSFM-208ENST00000543727 C17orf99Q6UX52 265 aa21.19■□□□□ 0.98
TSFM-208ENST00000543727 ACER1Q8TDN7 264 aa21.19■□□□□ 0.98
TSFM-208ENST00000543727 SMCR8Q8TEV9 937 aaPredicted RBP21.19■□□□□ 0.98
TSFM-208ENST00000543727 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.19■□□□□ 0.98
TSFM-208ENST00000543727 IL25Q9H293 177 aa21.19■□□□□ 0.98
TSFM-208ENST00000543727 R3HDMLQ9H3Y0 253 aa21.19■□□□□ 0.98
TSFM-208ENST00000543727 TSPY2A6NKD2 308 aa21.18■□□□□ 0.98
TSFM-208ENST00000543727 CDC45O75419 566 aa21.18■□□□□ 0.98
TSFM-208ENST00000543727 PRDM1O75626 825 aa21.18■□□□□ 0.98
TSFM-208ENST00000543727 EEF2P13639 858 aaKnown RBP21.18■□□□□ 0.98
TSFM-208ENST00000543727 VCAM1P19320 739 aa21.18■□□□□ 0.98
TSFM-208ENST00000543727 IRX3P78415 501 aaPredicted RBP21.18■□□□□ 0.98
TSFM-208ENST00000543727 MFSD6Q6ZSS7 791 aa21.18■□□□□ 0.98
TSFM-208ENST00000543727 STK11IPQ8N1F8 1099 aa21.18■□□□□ 0.98
TSFM-208ENST00000543727 VCPKMTQ9H867 229 aa21.18■□□□□ 0.98
TSFM-208ENST00000543727 GOPCQ9HD26 462 aa21.18■□□□□ 0.98
TSFM-208ENST00000543727 U3KPZ7 1027 aaPredicted RBP21.18■□□□□ 0.98
TSFM-208ENST00000543727 A0A1W2PRG0 241 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 USP17L15C9J2P7 530 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 USP17L13C9JLJ4 530 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 USP17L11C9JVI0 530 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 USP17L18D6R9N7 530 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 USP17L22D6RA61 530 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 USP17L17D6RBQ6 530 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 USP17L19D6RCP7 530 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 USP17L20D6RJB6 530 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 TTLL1O95922 423 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 TFAP4Q01664 338 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 USP17L24Q0WX57 530 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 PKN2Q16513 984 aaKnown RBP21.17■□□□□ 0.98
TSFM-208ENST00000543727 KIAA1211Q6ZU35 1233 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 SKAP1Q86WV1 359 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 SIAH1Q8IUQ4 282 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 MKL1Q969V6 931 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 ESYT1Q9BSJ8 1104 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 ASCC2Q9H1I8 757 aaPredicted RBP21.17■□□□□ 0.98
TSFM-208ENST00000543727 MTMR4Q9NYA4 1195 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 A0A0G2JMZ2 1700 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 RLFQ13129 1914 aa21.17■□□□□ 0.98
TSFM-208ENST00000543727 WDR46O15213 610 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms