RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 DCTPP1Q9H773 170 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 DNAJC18Q9H819 358 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 ARMT1Q9H993 441 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 DCP1AQ9NPI6 582 aaPredicted RBP8.62□□□□□ -1.03
NUP43-206ENST00000543637 ECHDC1Q9NTX5 307 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 SLC4A4Q9Y6R1 1079 aa8.62□□□□□ -1.03
NUP43-206ENST00000543637 TCRBV5S4A2TA0A5A2 114 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 ERC2O15083 957 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 MBD4O95243 580 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 SGPL1O95470 568 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 MAPK4P31152 587 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 GJA8P48165 433 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 JAG1P78504 1218 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 UBE3CQ15386 1083 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 TRMT44Q8IYL2 757 aaKnown RBP8.61□□□□□ -1.03
NUP43-206ENST00000543637 LCORLQ8N3X6 602 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 SDR42E1Q8WUS8 393 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 EDC3Q96F86 508 aaKnown RBP8.61□□□□□ -1.03
NUP43-206ENST00000543637 CCDC17Q96LX7 622 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 KIAA1683Q9H0B3 1180 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 SH2D4AQ9H788 454 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 ARHGEF10LQ9HCE6 1279 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 HMX1Q9NP08 348 aaPredicted RBP8.61□□□□□ -1.03
NUP43-206ENST00000543637 EMILIN3Q9NT22 766 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 HOXC10Q9NYD6 342 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 MORF4L1Q9UBU8 362 aa8.61□□□□□ -1.03
NUP43-206ENST00000543637 INHAP05111 366 aa8.6□□□□□ -1.03
NUP43-206ENST00000543637 ZFYP08048 801 aaPredicted RBP8.6□□□□□ -1.03
NUP43-206ENST00000543637 ELNP15502 786 aa8.6□□□□□ -1.03
NUP43-206ENST00000543637 SHMT1P34896 483 aa8.6□□□□□ -1.03
NUP43-206ENST00000543637 WDR78Q5VTH9 848 aa8.6□□□□□ -1.03
NUP43-206ENST00000543637 CATSPERGQ6ZRH7 1159 aa8.6□□□□□ -1.03
NUP43-206ENST00000543637 TMEM179Q6ZVK1 233 aa8.6□□□□□ -1.03
NUP43-206ENST00000543637 RABGAP1Q9Y3P9 1069 aa8.6□□□□□ -1.03
NUP43-206ENST00000543637 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
NUP43-206ENST00000543637 RPTORQ8N122 1335 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 ZNFX1Q9P2E3 1918 aaKnown RBP8.59□□□□□ -1.03
NUP43-206ENST00000543637 USP17L12C9JPN9 530 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 USP17L21D6R901 530 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 PRKAB2O43741 272 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 HMGCRP04035 888 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 APPP05067 770 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 GNAT2P19087 354 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 CYP2B6P20813 491 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 CDK8P49336 464 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 ERVK-9P63128 1117 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 ERVK-24P63145 666 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 COG2Q14746 738 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 SEPT2Q15019 361 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 Q3C1V9 767 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 C12orf60Q5U649 245 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 PLEKHH3Q7Z736 793 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 KBTBD3Q8NAB2 608 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 U2AF1L4Q8WU68 220 aaKnown RBP8.59□□□□□ -1.03
NUP43-206ENST00000543637 SOCS4Q8WXH5 440 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 C12orf42Q96LP6 360 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 YTHDC1Q96MU7 727 aaKnown RBP8.59□□□□□ -1.03
NUP43-206ENST00000543637 UNC93B1Q9H1C4 597 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 MKNK2Q9HBH9 465 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 ZNF287Q9HBT7 754 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 RBPJLQ9UBG7 517 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 NR2E3Q9Y5X4 410 aa8.59□□□□□ -1.03
NUP43-206ENST00000543637 TTC41PQ6P2S7 1318 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 RNF113AO15541 343 aaKnown RBP8.58□□□□□ -1.04
NUP43-206ENST00000543637 RAD21O60216 631 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 RGS2P41220 211 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 GABPAQ06546 454 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 SHROOM1Q2M3G4 852 aaPredicted RBP8.58□□□□□ -1.04
NUP43-206ENST00000543637 ZNF444Q8N0Y2 327 aaPredicted RBP8.58□□□□□ -1.04
NUP43-206ENST00000543637 ACER1Q8TDN7 264 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 DYNLL2Q96FJ2 89 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 DEFB118Q96PH6 123 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 TANGO6Q9C0B7 1094 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 RPAP3Q9H6T3 665 aaPredicted RBP8.58□□□□□ -1.04
NUP43-206ENST00000543637 KANSL2Q9H9L4 492 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 ARPP21Q9UBL0 812 aaPredicted RBP8.58□□□□□ -1.04
NUP43-206ENST00000543637 GJD2Q9UKL4 321 aa8.58□□□□□ -1.04
NUP43-206ENST00000543637 PLXNB2O15031 1838 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 MINDY4BA8MYZ0 360 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 PATL2C9JE40 543 aaKnown RBP8.57□□□□□ -1.04
NUP43-206ENST00000543637 STRNO43815 780 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 FARP2O94887 1054 aaPredicted RBP8.57□□□□□ -1.04
NUP43-206ENST00000543637 SLC3A2P08195 630 aaKnown RBP8.57□□□□□ -1.04
NUP43-206ENST00000543637 CYP2D6P10635 497 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 XRCC5P13010 732 aaKnown RBP8.57□□□□□ -1.04
NUP43-206ENST00000543637 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
NUP43-206ENST00000543637 VCAM1P19320 739 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 RRP1P56182 461 aaKnown RBP8.57□□□□□ -1.04
NUP43-206ENST00000543637 AAMPQ13685 434 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 SLFNL1Q499Z3 407 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 ANKRD45Q5TZF3 282 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 GIMAP6Q6P9H5 292 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 CTR9Q6PD62 1173 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 SAMD1Q6SPF0 538 aaPredicted RBP8.57□□□□□ -1.04
NUP43-206ENST00000543637 C16orf86Q6ZW13 317 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 GPR142Q7Z601 462 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 NECAB2Q7Z6G3 386 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 APPBP2Q92624 585 aa8.57□□□□□ -1.04
NUP43-206ENST00000543637 LPAR1Q92633 364 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms