RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 HAND2P61296 217 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
VEGFB-204ENST00000543462 PDE4BQ07343 736 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 SPP2Q13103 211 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 DGKZQ13574 1117 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 CCL15Q16663 113 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 AKNAD1Q5T1N1 836 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 STOX1Q6ZVD7 989 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 FAM43AQ8N2R8 423 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 PROCA1Q8NCQ7 364 aaPredicted RBP11.78□□□□□ -0.52
VEGFB-204ENST00000543462 NEDD1Q8NHV4 660 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 ACER1Q8TDN7 264 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 KIAA1683Q9H0B3 1180 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 RNF186Q9NXI6 227 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 SLC45A1Q9Y2W3 748 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 RBM8AQ9Y5S9 174 aaKnown RBP11.78□□□□□ -0.52
VEGFB-204ENST00000543462 U3KPZ7 1027 aaPredicted RBP11.78□□□□□ -0.52
VEGFB-204ENST00000543462 PLXNB2O15031 1838 aa11.78□□□□□ -0.52
VEGFB-204ENST00000543462 TRIM75PA6NK02 468 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 HSPA1AP0DMV8 641 aaKnown RBP11.77□□□□□ -0.53
VEGFB-204ENST00000543462 HSPA1BP0DMV9 641 aaKnown RBP11.77□□□□□ -0.53
VEGFB-204ENST00000543462 NT5C2P49902 561 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 MTMR2Q13614 643 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 NECTIN1Q15223 517 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 NOM1Q5C9Z4 860 aaKnown RBP11.77□□□□□ -0.53
VEGFB-204ENST00000543462 KIAA1755Q5JYT7 1200 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 ANKRD23Q86SG2 305 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 KCNB2Q92953 911 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 AS3MTQ9HBK9 375 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 ZNF287Q9HBT7 754 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 IL17RBQ9NRM6 502 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 EMILIN3Q9NT22 766 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 SYNPO2Q9UMS6 1093 aa11.77□□□□□ -0.53
VEGFB-204ENST00000543462 DOCK3Q8IZD9 2030 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 C19orf81C9J6K1 198 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 USP17L10C9JJH3 530 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 FOXN1O15353 648 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 CA12O43570 354 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 SLC3A2P08195 630 aaKnown RBP11.76□□□□□ -0.53
VEGFB-204ENST00000543462 HMGCS2P54868 508 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 ICA1Q05084 483 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 COL9A3Q14050 684 aaPredicted RBP11.76□□□□□ -0.53
VEGFB-204ENST00000543462 RAB3GAP1Q15042 981 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 IMMTQ16891 758 aaKnown RBP11.76□□□□□ -0.53
VEGFB-204ENST00000543462 TREML2Q5T2D2 321 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 STK11IPQ8N1F8 1099 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 R3HDMLQ9H3Y0 253 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 KANSL2Q9H9L4 492 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 CABP5Q9NP86 173 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 TCP11L1Q9NUJ3 509 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 MTMR4Q9NYA4 1195 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 NYAP2Q9P242 653 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 AGTPBP1Q9UPW5 1226 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 TMX2Q9Y320 296 aa11.76□□□□□ -0.53
VEGFB-204ENST00000543462 ZNF236Q9UL36 1845 aa11.75□□□□□ -0.53
VEGFB-204ENST00000543462 ZNF213O14771 459 aa11.75□□□□□ -0.53
VEGFB-204ENST00000543462 EPB41L2O43491 1005 aaKnown RBP11.75□□□□□ -0.53
VEGFB-204ENST00000543462 HSPA8P11142 646 aaKnown RBP11.75□□□□□ -0.53
VEGFB-204ENST00000543462 EEF2P13639 858 aaKnown RBP11.75□□□□□ -0.53
VEGFB-204ENST00000543462 FAM47AQ5JRC9 791 aa11.75□□□□□ -0.53
VEGFB-204ENST00000543462 RCSD1Q6JBY9 416 aa11.75□□□□□ -0.53
VEGFB-204ENST00000543462 FASTKD5Q7L8L6 764 aaKnown RBP11.75□□□□□ -0.53
VEGFB-204ENST00000543462 MKL1Q969V6 931 aa11.75□□□□□ -0.53
VEGFB-204ENST00000543462 RNF41Q9H4P4 317 aaPredicted RBP11.75□□□□□ -0.53
VEGFB-204ENST00000543462 MKNK2Q9HBH9 465 aa11.75□□□□□ -0.53
VEGFB-204ENST00000543462 GTF3C3Q9Y5Q9 886 aa11.75□□□□□ -0.53
VEGFB-204ENST00000543462 HTTP42858 3142 aa11.75□□□□□ -0.53
VEGFB-204ENST00000543462 MPHOSPH10O00566 681 aaKnown RBP11.74□□□□□ -0.53
VEGFB-204ENST00000543462 SLC27A2O14975 620 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 NMT2O60551 498 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 ALDH1A1P00352 501 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 VCAM1P19320 739 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 HOXA7P31268 230 aaPredicted RBP11.74□□□□□ -0.53
VEGFB-204ENST00000543462 TFAP4Q01664 338 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 CRHR2Q13324 411 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 USP17L2Q6R6M4 530 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 CASC1Q6TDU7 716 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 MFSD6Q6ZSS7 791 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 VCPKMTQ9H867 229 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 ANO2Q9NQ90 1003 aa11.74□□□□□ -0.53
VEGFB-204ENST00000543462 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
VEGFB-204ENST00000543462 SMCHD1A6NHR9 2005 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 B4E1Z4 1266 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 PDHXO00330 501 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 TRPA1O75762 1119 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 MYH6P13533 1939 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 USP14P54578 494 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 TSGA10IPQ3SY00 556 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 CREB3L3Q68CJ9 461 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 RBBP6Q7Z6E9 1792 aaKnown RBP11.73□□□□□ -0.53
VEGFB-204ENST00000543462 MB21D2Q8IYB1 491 aaPredicted RBP11.73□□□□□ -0.53
VEGFB-204ENST00000543462 ZNF444Q8N0Y2 327 aaPredicted RBP11.73□□□□□ -0.53
VEGFB-204ENST00000543462 GMCL1P1Q8NEA9 526 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 ANKS1AQ92625 1134 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 LPAR1Q92633 364 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 ARHGEF10LQ9HCE6 1279 aa11.73□□□□□ -0.53
VEGFB-204ENST00000543462 LCTP09848 1927 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms