RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 LEKR1Q6ZMV7 388 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 ZNF654Q8IZM8 581 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 LRRC47Q8N1G4 583 aaKnown RBP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 PNMA1Q8ND90 353 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 GRAPLQ8TC17 118 aaPredicted RBP7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 JADE2Q9NQC1 790 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 ATP8A2Q9NTI2 1148 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 SNX14Q9Y5W7 946 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 CDC42BPGQ6DT37 1551 aa7.73□□□□□ -1.17
SRGAP1-206ENST00000543397 PRAMEF22A3QJZ6 481 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 SYT1P21579 422 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 PRPHP41219 470 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 ANO6Q4KMQ2 910 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 SLC27A3Q5K4L6 730 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 ARHGEF16Q5VV41 709 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 C9orf131Q5VYM1 1079 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 NEK11Q8NG66 645 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 PHKBQ93100 1093 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 DNM3Q9UQ16 869 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 ESPNB1AK53 854 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 E7EWF7 191 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 C21orf2O43822 256 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 EPB41P11171 864 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 MCM3P25205 808 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 SLFN13Q68D06 897 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 CCDC91Q7Z6B0 441 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 MCF2L2Q86YR7 1114 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 DYDC1Q8WWB3 177 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 HAUS7Q99871 368 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 OVOS2A0A0G2JMS6 1433 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 OVOS2A0A0J9YW53 1432 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 OVOS2Q6IE36 1432 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 SPATA31A6Q5VVP1 1343 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 GOLGA6L10A0A0M3HER8 536 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 EEF2P13639 858 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 HSPA1LP34931 641 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 TRPC3Q13507 836 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 UBE3CQ15386 1083 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 MCTP2Q6DN12 878 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 KRBA2Q6ZNG9 492 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 ZSCAN30Q86W11 494 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 CCDC125Q86Z20 511 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 GPIHBP1Q8IV16 184 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 AOPEPQ8N6M6 819 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 FAM200AQ8TCP9 573 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 TRAIPQ9BWF2 469 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 KLHL42Q9P2K6 505 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 SSX2IPQ9Y2D8 614 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 GAS7O60861 476 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 ADCY5O95622 1261 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 PDE4DQ08499 809 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 CALCRLQ16602 461 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 TXNRD1Q16881 649 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 KIAA0753Q2KHM9 967 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 SPECC1Q5M775 1068 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 MAEAQ7L5Y9 396 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 DPP9Q86TI2 863 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 FMNL3Q8IVF7 1028 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 ZSCAN10Q96SZ4 725 aaPredicted RBP7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 CWC15Q9P013 229 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 NARFQ9UHQ1 456 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 KCNG1Q9UIX4 513 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 TET3O43151 1660 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 hCG_1642624A0A1W2PR95 340 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 SMCO2A6NFE2 343 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 SPOUT1Q5T280 376 aaKnown RBP7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 FBXO11Q86XK2 927 aa7.72□□□□□ -1.17
SRGAP1-206ENST00000543397 ELP1O95163 1332 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 USP17L3A6NCW0 530 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 USP17L4A6NCW7 530 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 USP14P54578 494 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 ANO1Q5XXA6 986 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 CNNM4Q6P4Q7 775 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 USP17L1Q7RTZ2 530 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 PLEKHF1Q96S99 279 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 MAP7D2Q96T17 732 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 DNAJC25Q9H1X3 360 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 GPR108Q9NPR9 543 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 TNKSO95271 1327 aa7.71□□□□□ -1.17
SRGAP1-206ENST00000543397 TMEM232C9JQI7 657 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 GCOM1H8Y6P7 765 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 POLR2MP0CAP2 368 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 PCP11498 1178 aaKnown RBP7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 GJC1P36383 396 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 UVSSAQ2YD98 709 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 FAM117AQ9C073 453 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 SWAP70Q9UH65 585 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 KLRF2D3W0D1 207 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 STX10O60499 249 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 IREB2P48200 963 aaKnown RBP7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 EN1Q05925 392 aaPredicted RBP7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 C8orf34Q49A92 452 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 GRIPAP1Q4V328 841 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 KRT40Q6A162 431 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 NBPF3Q9H094 633 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 PSTPIP2Q9H939 334 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 TRPC6Q9Y210 931 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 GOLGA6L7A0A1B0GV03 622 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 PTGS1P23219 599 aa7.71□□□□□ -1.18
SRGAP1-206ENST00000543397 ADORA1P30542 326 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms