RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 OSBPP22059 807 aa19.42■□□□□ 0.7
CIT-212ENST00000543239 PDE4AP27815 886 aa19.42■□□□□ 0.7
CIT-212ENST00000543239 HOXA7P31268 230 aaPredicted RBP19.42■□□□□ 0.7
CIT-212ENST00000543239 NAPBQ9H115 298 aa19.42■□□□□ 0.7
CIT-212ENST00000543239 EMILIN3Q9NT22 766 aa19.42■□□□□ 0.7
CIT-212ENST00000543239 A0A0D9SFI3 127 aa19.41■□□□□ 0.7
CIT-212ENST00000543239 MINDY4BA8MYZ0 360 aa19.41■□□□□ 0.7
CIT-212ENST00000543239 GNRH1P01148 92 aa19.41■□□□□ 0.7
CIT-212ENST00000543239 AKR1B1P15121 316 aa19.41■□□□□ 0.7
CIT-212ENST00000543239 MCMDC2Q4G0Z9 681 aa19.41■□□□□ 0.7
CIT-212ENST00000543239 CCDC129Q6ZRS4 1044 aa19.41■□□□□ 0.7
CIT-212ENST00000543239 FAM227BQ96M60 508 aa19.41■□□□□ 0.7
CIT-212ENST00000543239 ASCC2Q9H1I8 757 aaPredicted RBP19.41■□□□□ 0.7
CIT-212ENST00000543239 ZNF287Q9HBT7 754 aa19.41■□□□□ 0.7
CIT-212ENST00000543239 FOXP2O15409 715 aa19.4■□□□□ 0.7
CIT-212ENST00000543239 SDSP20132 328 aa19.4■□□□□ 0.7
CIT-212ENST00000543239 GCLCP48506 637 aaPredicted RBP19.4■□□□□ 0.7
CIT-212ENST00000543239 IRX3P78415 501 aaPredicted RBP19.4■□□□□ 0.7
CIT-212ENST00000543239 CAP1Q01518 475 aa19.4■□□□□ 0.7
CIT-212ENST00000543239 NMIQ13287 307 aaPredicted RBP19.4■□□□□ 0.7
CIT-212ENST00000543239 ACER1Q8TDN7 264 aa19.4■□□□□ 0.7
CIT-212ENST00000543239 HIP1O00291 1037 aa19.39■□□□□ 0.69
CIT-212ENST00000543239 RASA1P20936 1047 aa19.39■□□□□ 0.69
CIT-212ENST00000543239 ICA1Q05084 483 aa19.39■□□□□ 0.69
CIT-212ENST00000543239 TTC22Q5TAA0 569 aa19.39■□□□□ 0.69
CIT-212ENST00000543239 SH2D4AQ9H788 454 aa19.39■□□□□ 0.69
CIT-212ENST00000543239 MKNK2Q9HBH9 465 aa19.39■□□□□ 0.69
CIT-212ENST00000543239 HPS5Q9UPZ3 1129 aa19.39■□□□□ 0.69
CIT-212ENST00000543239 PTPN22Q9Y2R2 807 aa19.39■□□□□ 0.69
CIT-212ENST00000543239 CAPN15O75808 1086 aa19.38■□□□□ 0.69
CIT-212ENST00000543239 SLC3A2P08195 630 aaKnown RBP19.38■□□□□ 0.69
CIT-212ENST00000543239 MFAP1P55081 439 aaKnown RBP19.38■□□□□ 0.69
CIT-212ENST00000543239 PPARAQ07869 468 aa19.38■□□□□ 0.69
CIT-212ENST00000543239 ALX1Q15699 326 aa19.38■□□□□ 0.69
CIT-212ENST00000543239 ZYXQ15942 572 aaKnown RBP19.38■□□□□ 0.69
CIT-212ENST00000543239 FAM110CQ1W6H9 321 aa19.38■□□□□ 0.69
CIT-212ENST00000543239 KANSL2Q9H9L4 492 aa19.38■□□□□ 0.69
CIT-212ENST00000543239 ARHGEF10LQ9HCE6 1279 aa19.38■□□□□ 0.69
CIT-212ENST00000543239 DIAPH3Q9NSV4 1193 aa19.38■□□□□ 0.69
CIT-212ENST00000543239 GREB1LQ9C091 1923 aaPredicted RBP19.37■□□□□ 0.69
CIT-212ENST00000543239 ZMYM6O95789 1325 aa19.37■□□□□ 0.69
CIT-212ENST00000543239 CCDC171Q6TFL3 1326 aa19.37■□□□□ 0.69
CIT-212ENST00000543239 A0A1W2PRG0 241 aa19.37■□□□□ 0.69
CIT-212ENST00000543239 VCAM1P19320 739 aa19.37■□□□□ 0.69
CIT-212ENST00000543239 PSMC4P43686 418 aa19.37■□□□□ 0.69
CIT-212ENST00000543239 PRMT2P55345 433 aa19.37■□□□□ 0.69
CIT-212ENST00000543239 VPS53Q5VIR6 699 aa19.37■□□□□ 0.69
CIT-212ENST00000543239 ARHGAP39Q9C0H5 1083 aa19.37■□□□□ 0.69
CIT-212ENST00000543239 USP17L15C9J2P7 530 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 USP17L13C9JLJ4 530 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 USP17L11C9JVI0 530 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 USP17L18D6R9N7 530 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 USP17L22D6RA61 530 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 USP17L17D6RBQ6 530 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 USP17L19D6RCP7 530 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 USP17L20D6RJB6 530 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 GSPT1P15170 499 aaKnown RBP19.36■□□□□ 0.69
CIT-212ENST00000543239 PDE4BQ07343 736 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 USP17L24Q0WX57 530 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 CENPQQ7L2Z9 268 aaPredicted RBP19.36■□□□□ 0.69
CIT-212ENST00000543239 ZNF589Q86UQ0 364 aaPredicted RBP19.36■□□□□ 0.69
CIT-212ENST00000543239 SIAH1Q8IUQ4 282 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 ANKRD13CQ8N6S4 541 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 GTF3C2Q8WUA4 911 aaPredicted RBP19.36■□□□□ 0.69
CIT-212ENST00000543239 TRIM47Q96LD4 638 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 TMX2Q9Y320 296 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 ZSWIM8A7E2V4 1837 aa19.36■□□□□ 0.69
CIT-212ENST00000543239 CCDC85CA6NKD9 419 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 HSPD1P10809 573 aaKnown RBP19.35■□□□□ 0.69
CIT-212ENST00000543239 HOXD10P28358 340 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 CTGFP29279 349 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 FCGRTP55899 365 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 HERVK_113P62684 666 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 CLEC10AQ8IUN9 316 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 ZNF444Q8N0Y2 327 aaPredicted RBP19.35■□□□□ 0.69
CIT-212ENST00000543239 STK11IPQ8N1F8 1099 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 LPAR1Q92633 364 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 P2RX7Q99572 595 aaKnown RBP19.35■□□□□ 0.69
CIT-212ENST00000543239 MORF4L1Q9UBU8 362 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 ANAPC4Q9UJX5 808 aa19.35■□□□□ 0.69
CIT-212ENST00000543239 FMNL1O95466 1100 aaPredicted RBP19.34■□□□□ 0.69
CIT-212ENST00000543239 CATSPERGQ6ZRH7 1159 aa19.34■□□□□ 0.69
CIT-212ENST00000543239 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.34■□□□□ 0.69
CIT-212ENST00000543239 PLIN4Q96Q06 1357 aa19.33■□□□□ 0.69
CIT-212ENST00000543239 PRDM1O75626 825 aa19.33■□□□□ 0.68
CIT-212ENST00000543239 FGAP02671 866 aa19.33■□□□□ 0.68
CIT-212ENST00000543239 EEF2P13639 858 aaKnown RBP19.33■□□□□ 0.68
CIT-212ENST00000543239 CWC27Q6UX04 472 aaKnown RBP19.33■□□□□ 0.68
CIT-212ENST00000543239 RPAP3Q9H6T3 665 aaPredicted RBP19.33■□□□□ 0.68
CIT-212ENST00000543239 VCPKMTQ9H867 229 aa19.33■□□□□ 0.68
CIT-212ENST00000543239 NYAP2Q9P242 653 aa19.33■□□□□ 0.68
CIT-212ENST00000543239 SRRDQ9UH36 339 aa19.33■□□□□ 0.68
CIT-212ENST00000543239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.33■□□□□ 0.68
CIT-212ENST00000543239 HTTP42858 3142 aa19.33■□□□□ 0.68
CIT-212ENST00000543239 IGKV6D-41A0A0C4DH26 115 aa19.32■□□□□ 0.68
CIT-212ENST00000543239 LBX2Q6XYB7 198 aa19.32■□□□□ 0.68
CIT-212ENST00000543239 PTCH2Q9Y6C5 1203 aa19.32■□□□□ 0.68
CIT-212ENST00000543239 MGAMO43451 1857 aa19.32■□□□□ 0.68
CIT-212ENST00000543239 TNPO2O14787 897 aaKnown RBP19.31■□□□□ 0.68
CIT-212ENST00000543239 ATP2B2Q01814 1243 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms