RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.54
C2CD3-219ENST00000542930 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
C2CD3-219ENST00000542930 DHX36Q9H2U1 1008 aaKnown RBP11.65□□□□□ -0.54
C2CD3-219ENST00000542930 EMILIN3Q9NT22 766 aa11.65□□□□□ -0.54
C2CD3-219ENST00000542930 CHD7Q9P2D1 2997 aa11.65□□□□□ -0.54
C2CD3-219ENST00000542930 PIEZO1Q92508 2521 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
C2CD3-219ENST00000542930 RAG1P15918 1043 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 ADORA1P30542 326 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 GSTO1P78417 241 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 LRRC41Q15345 812 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 ANO1Q5XXA6 986 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 OLFML2BQ68BL8 750 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 METTL16Q86W50 562 aaKnown RBP11.64□□□□□ -0.55
C2CD3-219ENST00000542930 FERMT2Q96AC1 680 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 C12orf42Q96LP6 360 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 SIL1Q9H173 461 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 HCN4Q9Y3Q4 1203 aa11.64□□□□□ -0.55
C2CD3-219ENST00000542930 IL15P40933 162 aaPredicted RBP11.63□□□□□ -0.55
C2CD3-219ENST00000542930 LBX2Q6XYB7 198 aa11.63□□□□□ -0.55
C2CD3-219ENST00000542930 FOXP4Q8IVH2 680 aaPredicted RBP11.63□□□□□ -0.55
C2CD3-219ENST00000542930 TEX11Q8IYF3 940 aa11.63□□□□□ -0.55
C2CD3-219ENST00000542930 NSUN4Q96CB9 384 aaKnown RBP11.63□□□□□ -0.55
C2CD3-219ENST00000542930 PRDM12Q9H4Q4 367 aa11.63□□□□□ -0.55
C2CD3-219ENST00000542930 ZBTB21Q9ULJ3 1066 aa11.63□□□□□ -0.55
C2CD3-219ENST00000542930 GDF11O95390 407 aa11.62□□□□□ -0.55
C2CD3-219ENST00000542930 CCDC85BQ15834 202 aaPredicted RBP11.62□□□□□ -0.55
C2CD3-219ENST00000542930 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
C2CD3-219ENST00000542930 CATSPERGQ6ZRH7 1159 aa11.62□□□□□ -0.55
C2CD3-219ENST00000542930 DPP9Q86TI2 863 aa11.62□□□□□ -0.55
C2CD3-219ENST00000542930 PBX4Q9BYU1 374 aa11.62□□□□□ -0.55
C2CD3-219ENST00000542930 DNAJC18Q9H819 358 aa11.62□□□□□ -0.55
C2CD3-219ENST00000542930 TMEM39AQ9NV64 488 aa11.62□□□□□ -0.55
C2CD3-219ENST00000542930 BTBD7Q9P203 1132 aa11.62□□□□□ -0.55
C2CD3-219ENST00000542930 PHF24Q9UPV7 400 aa11.62□□□□□ -0.55
C2CD3-219ENST00000542930 STRNO43815 780 aa11.61□□□□□ -0.55
C2CD3-219ENST00000542930 BMP1P13497 986 aa11.61□□□□□ -0.55
C2CD3-219ENST00000542930 ADORA2AP29274 412 aa11.61□□□□□ -0.55
C2CD3-219ENST00000542930 TIMM10P62072 90 aa11.61□□□□□ -0.55
C2CD3-219ENST00000542930 ADGRE1Q14246 886 aa11.61□□□□□ -0.55
C2CD3-219ENST00000542930 CRACR2BQ8N4Y2 399 aaPredicted RBP11.61□□□□□ -0.55
C2CD3-219ENST00000542930 LRFN3Q9BTN0 628 aa11.61□□□□□ -0.55
C2CD3-219ENST00000542930 TRIM34Q9BYJ4 488 aa11.61□□□□□ -0.55
C2CD3-219ENST00000542930 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
C2CD3-219ENST00000542930 CXXC1Q9P0U4 656 aaPredicted RBP11.61□□□□□ -0.55
C2CD3-219ENST00000542930 MYO9BQ13459 2157 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 PQBP1O60828 265 aaKnown RBP11.6□□□□□ -0.55
C2CD3-219ENST00000542930 IGFBP4P22692 258 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 PBX2P40425 430 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 MVPQ14764 893 aaKnown RBP11.6□□□□□ -0.55
C2CD3-219ENST00000542930 FAM47AQ5JRC9 791 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 CCDC129Q6ZRS4 1044 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 SH3RF3Q8TEJ3 882 aaPredicted RBP11.6□□□□□ -0.55
C2CD3-219ENST00000542930 TOX2Q96NM4 488 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 NECAB3Q96P71 396 aaPredicted RBP11.6□□□□□ -0.55
C2CD3-219ENST00000542930 FEZ1Q99689 392 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.6□□□□□ -0.55
C2CD3-219ENST00000542930 NOL10Q9BSC4 688 aaKnown RBP11.6□□□□□ -0.55
C2CD3-219ENST00000542930 SLC5A4Q9NY91 659 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 RAI14Q9P0K7 980 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 SIPA1L1O43166 1804 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 PTPRCP08575 1304 aa11.6□□□□□ -0.55
C2CD3-219ENST00000542930 SPDYE16A6NNV3 312 aaPredicted RBP11.59□□□□□ -0.55
C2CD3-219ENST00000542930 TIMP1P01033 207 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 VCAM1P19320 739 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 USP14P54578 494 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 FAAP100Q0VG06 881 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 ZYXQ15942 572 aaKnown RBP11.59□□□□□ -0.55
C2CD3-219ENST00000542930 AAK1Q2M2I8 961 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 PRAMEF19Q5SWL8 479 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 RASIP1Q5U651 963 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 CCDC174Q6PII3 467 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 ANKRD33Q7Z3H0 272 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 RNF180Q86T96 592 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 SLC44A5Q8NCS7 719 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 XAGE2Q96GT9 111 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 XPNPEP3Q9NQH7 507 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 HMG20BQ9P0W2 317 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
C2CD3-219ENST00000542930 TRANK1O15050 2925 aa11.59□□□□□ -0.55
C2CD3-219ENST00000542930 ZNF236Q9UL36 1845 aa11.58□□□□□ -0.56
C2CD3-219ENST00000542930 A0A1B0GUL7 405 aa11.58□□□□□ -0.56
C2CD3-219ENST00000542930 A0A1W2PQ45 241 aaPredicted RBP11.58□□□□□ -0.56
C2CD3-219ENST00000542930 A0A1W2PQY0 241 aa11.58□□□□□ -0.56
C2CD3-219ENST00000542930 GRXCR1A8MXD5 290 aa11.58□□□□□ -0.56
C2CD3-219ENST00000542930 DCDC2CA8MYV0 355 aa11.58□□□□□ -0.56
C2CD3-219ENST00000542930 COBLO75128 1261 aa11.58□□□□□ -0.56
C2CD3-219ENST00000542930 BAG3O95817 575 aa11.58□□□□□ -0.56
C2CD3-219ENST00000542930 GH2P01242 217 aa11.58□□□□□ -0.56
C2CD3-219ENST00000542930 RARBP10826 455 aa11.58□□□□□ -0.56
C2CD3-219ENST00000542930 PLCG2P16885 1265 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms