RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 NOC4LQ9BVI4 516 aaKnown RBP4.5□□□□□ -1.69
KNTC1-213ENST00000542727 GPR62Q9BZJ7 368 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 EPB41L4BQ9H329 900 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 NSUN3Q9H649 340 aaKnown RBP4.5□□□□□ -1.69
KNTC1-213ENST00000542727 GPATCH2Q9NW75 528 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 SLAMF8Q9P0V8 285 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 KCNH3Q9ULD8 1083 aa4.5□□□□□ -1.69
KNTC1-213ENST00000542727 HPXP02790 462 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 ESR1P03372 595 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 TMEM253P0C7T8 217 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 CDK8P49336 464 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 CDH24Q86UP0 819 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 C1QL4Q86Z23 238 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 XAGE3Q8WTP9 111 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 CYB5D2Q8WUJ1 264 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 MYLIPQ8WY64 445 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 SYTL4Q96C24 671 aaPredicted RBP4.49□□□□□ -1.69
KNTC1-213ENST00000542727 DCP1AQ9NPI6 582 aaPredicted RBP4.49□□□□□ -1.69
KNTC1-213ENST00000542727 CEP131Q9UPN4 1083 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 PCDHB5Q9Y5E4 795 aa4.49□□□□□ -1.69
KNTC1-213ENST00000542727 TCAF2A6NFQ2 919 aa4.48□□□□□ -1.69
KNTC1-213ENST00000542727 TPP2P29144 1249 aaPredicted RBP4.48□□□□□ -1.69
KNTC1-213ENST00000542727 ITGAEP38570 1179 aa4.48□□□□□ -1.69
KNTC1-213ENST00000542727 YARSP54577 528 aaKnown RBP4.48□□□□□ -1.69
KNTC1-213ENST00000542727 GAB4Q2WGN9 574 aa4.48□□□□□ -1.69
KNTC1-213ENST00000542727 EAPPQ56P03 285 aaPredicted RBP4.48□□□□□ -1.69
KNTC1-213ENST00000542727 LCE4AQ5TA78 99 aa4.48□□□□□ -1.69
KNTC1-213ENST00000542727 AMIGO3Q86WK7 504 aa4.48□□□□□ -1.69
KNTC1-213ENST00000542727 OXR1Q8N573 874 aa4.48□□□□□ -1.69
KNTC1-213ENST00000542727 PDZD8Q8NEN9 1154 aa4.48□□□□□ -1.69
KNTC1-213ENST00000542727 DNAJB8Q8NHS0 232 aa4.48□□□□□ -1.69
KNTC1-213ENST00000542727 DHX38Q92620 1227 aaKnown RBP4.48□□□□□ -1.69
KNTC1-213ENST00000542727 DIRC2Q96SL1 478 aa4.48□□□□□ -1.69
KNTC1-213ENST00000542727 DNAJC25-GNG10A0A024R161 153 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 FITM1A5D6W6 292 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 BPNT1O95861 308 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 KRT1P04264 644 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 C1QTNF9P0C862 333 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 ZSCAN22P10073 491 aaPredicted RBP4.47□□□□□ -1.69
KNTC1-213ENST00000542727 TFE3P19532 575 aaPredicted RBP4.47□□□□□ -1.69
KNTC1-213ENST00000542727 NR0B2Q15466 257 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 RALGPS1Q5JS13 557 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 TMEM201Q5SNT2 666 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 TSPYL5Q86VY4 417 aaPredicted RBP4.47□□□□□ -1.69
KNTC1-213ENST00000542727 IRF2BP1Q8IU81 584 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 CREG2Q8IUH2 290 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 SLFN12Q8IYM2 578 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 RNF141Q8WVD5 230 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 ACSF2Q96CM8 615 aaPredicted RBP4.47□□□□□ -1.69
KNTC1-213ENST00000542727 Q96M66 194 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 DUSP9Q99956 384 aaKnown RBP4.47□□□□□ -1.69
KNTC1-213ENST00000542727 DPH2Q9BQC3 489 aaPredicted RBP4.47□□□□□ -1.69
KNTC1-213ENST00000542727 TRAIPQ9BWF2 469 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 SLC6A17Q9H1V8 727 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 CD320Q9NPF0 282 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 DUSP13Q9UII6 198 aa4.47□□□□□ -1.69
KNTC1-213ENST00000542727 HK2P52789 917 aa4.46□□□□□ -1.7
KNTC1-213ENST00000542727 CHRNEQ04844 493 aa4.46□□□□□ -1.7
KNTC1-213ENST00000542727 TAF1CQ15572 869 aaPredicted RBP4.46□□□□□ -1.7
KNTC1-213ENST00000542727 KCNA10Q16322 511 aa4.46□□□□□ -1.7
KNTC1-213ENST00000542727 CIAPIN1Q6FI81 312 aa4.46□□□□□ -1.7
KNTC1-213ENST00000542727 LCNL1Q6ZST4 164 aa4.46□□□□□ -1.7
KNTC1-213ENST00000542727 DTWD2Q8NBA8 298 aa4.46□□□□□ -1.7
KNTC1-213ENST00000542727 ASPNQ9BXN1 380 aa4.46□□□□□ -1.7
KNTC1-213ENST00000542727 DUSP15Q9H1R2 295 aaPredicted RBP4.46□□□□□ -1.7
KNTC1-213ENST00000542727 CWC22Q9HCG8 908 aaKnown RBP4.46□□□□□ -1.7
KNTC1-213ENST00000542727 CILPO75339 1184 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 PLCG1P19174 1290 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 LTKP29376 864 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 DAB2P98082 770 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 EGR3Q06889 387 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 DUSP4Q13115 394 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 SNX17Q15036 470 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 MAP3K11Q16584 847 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 ATG14Q6ZNE5 492 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 SPPL2CQ8IUH8 684 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 FAM13CQ8NE31 585 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 PPP1R13LQ8WUF5 828 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 ADAMTS10Q9H324 1103 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 PRR36Q9H6K5 1346 aa4.45□□□□□ -1.7
KNTC1-213ENST00000542727 USP31Q70CQ4 1352 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 ANKRD33BA6NCL7 494 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 NPIPB6E9PJ23 425 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 PEX10O60683 326 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 SEMA7AO75326 666 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 ZGLP1P0C6A0 271 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 LMNB2Q03252 620 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 PSMD2Q13200 908 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 PWP1Q13610 501 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 MEI1Q5TIA1 1274 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 ANKS4BQ8N8V4 417 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 PHC3Q8NDX5 983 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 GATAD2BQ8WXI9 593 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 CRELD1Q96HD1 420 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
KNTC1-213ENST00000542727 RBM47A0AV96 593 aaKnown RBP4.43□□□□□ -1.7
KNTC1-213ENST00000542727 ETV2O00321 342 aaPredicted RBP4.43□□□□□ -1.7
KNTC1-213ENST00000542727 LINC00310P59036 64 aa4.43□□□□□ -1.7
KNTC1-213ENST00000542727 LILRA6Q6PI73 481 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms