RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 CSRNP1Q96S65 589 aa15.5■□□□□ 0.07
CHFR-221ENST00000542714 H7C1D1 291 aa15.49■□□□□ 0.07
CHFR-221ENST00000542714 STX6O43752 255 aa15.49■□□□□ 0.07
CHFR-221ENST00000542714 DHX16O60231 1041 aaKnown RBP15.49■□□□□ 0.07
CHFR-221ENST00000542714 HMGN5P82970 282 aaKnown RBP15.49■□□□□ 0.07
CHFR-221ENST00000542714 CLEC10AQ8IUN9 316 aa15.49■□□□□ 0.07
CHFR-221ENST00000542714 FANCBQ8NB91 859 aa15.49■□□□□ 0.07
CHFR-221ENST00000542714 TEPSINQ96N21 525 aa15.49■□□□□ 0.07
CHFR-221ENST00000542714 TMEM47Q9BQJ4 181 aa15.49■□□□□ 0.07
CHFR-221ENST00000542714 HACL1Q9UJ83 578 aa15.49■□□□□ 0.07
CHFR-221ENST00000542714 SCAF8Q9UPN6 1271 aaKnown RBP15.49■□□□□ 0.07
CHFR-221ENST00000542714 MTMR6Q9Y217 621 aa15.49■□□□□ 0.07
CHFR-221ENST00000542714 HIRAP54198 1017 aaPredicted RBP15.48■□□□□ 0.07
CHFR-221ENST00000542714 JAG1P78504 1218 aa15.48■□□□□ 0.07
CHFR-221ENST00000542714 RASA3Q14644 834 aa15.48■□□□□ 0.07
CHFR-221ENST00000542714 FOXD4L5Q5VV16 416 aaPredicted RBP15.48■□□□□ 0.07
CHFR-221ENST00000542714 LARP1BQ659C4 914 aaKnown RBP15.48■□□□□ 0.07
CHFR-221ENST00000542714 NBPF11Q86T75 865 aa15.48■□□□□ 0.07
CHFR-221ENST00000542714 PNMA1Q8ND90 353 aa15.48■□□□□ 0.07
CHFR-221ENST00000542714 FOXD4L4Q8WXT5 416 aaPredicted RBP15.48■□□□□ 0.07
CHFR-221ENST00000542714 CCDC17Q96LX7 622 aa15.48■□□□□ 0.07
CHFR-221ENST00000542714 KAT14Q9H8E8 782 aa15.48■□□□□ 0.07
CHFR-221ENST00000542714 MTMR4Q9NYA4 1195 aa15.48■□□□□ 0.07
CHFR-221ENST00000542714 HERC5Q9UII4 1024 aaKnown RBP15.48■□□□□ 0.07
CHFR-221ENST00000542714 TCHHQ07283 1943 aa15.48■□□□□ 0.07
CHFR-221ENST00000542714 WDR33Q9C0J8 1336 aaKnown RBP15.47■□□□□ 0.07
CHFR-221ENST00000542714 STK36Q9NRP7 1315 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 CPLX1O14810 134 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 GRIN3BO60391 1043 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 CALM1P0DP23 149 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 CALM2P0DP24 149 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 CALM3P0DP25 149 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 ZSCAN22P10073 491 aaPredicted RBP15.47■□□□□ 0.07
CHFR-221ENST00000542714 TOP1P11387 765 aaKnown RBP15.47■□□□□ 0.07
CHFR-221ENST00000542714 IFNAR1P17181 557 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 GUCY1A2P33402 732 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 TNNI2P48788 182 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 MAP3K10Q02779 954 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 FUT2Q10981 343 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 CERKLQ49MI3 558 aaPredicted RBP15.47■□□□□ 0.07
CHFR-221ENST00000542714 PHKBQ93100 1093 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 TRIM34Q9BYJ4 488 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 ORC3Q9UBD5 711 aaPredicted RBP15.47■□□□□ 0.07
CHFR-221ENST00000542714 SCN4AP35499 1836 aa15.47■□□□□ 0.07
CHFR-221ENST00000542714 MPHOSPH10O00566 681 aaKnown RBP15.46■□□□□ 0.07
CHFR-221ENST00000542714 TBC1D12O60347 775 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 GDF11O95390 407 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 PLEKHA8P1O95397 391 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 FMNL1O95466 1100 aaPredicted RBP15.46■□□□□ 0.07
CHFR-221ENST00000542714 PDCP20941 246 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 TNFAIP1Q13829 316 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 GRM4Q14833 912 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 PPP2R5BQ15173 497 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 NFKBIBQ15653 356 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 ANGEL2Q5VTE6 544 aaKnown RBP15.46■□□□□ 0.07
CHFR-221ENST00000542714 CLEC17AQ6ZS10 378 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 TMTC3Q6ZXV5 915 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 CDC37L1Q7L3B6 337 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 RASGRP2Q7LDG7 609 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 CMTR1Q8N1G2 835 aaKnown RBP15.46■□□□□ 0.07
CHFR-221ENST00000542714 MAP3K14Q99558 947 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.46■□□□□ 0.07
CHFR-221ENST00000542714 RBM28Q9NW13 759 aaKnown RBP15.46■□□□□ 0.07
CHFR-221ENST00000542714 STX8Q9UNK0 236 aa15.46■□□□□ 0.07
CHFR-221ENST00000542714 WDR90Q96KV7 1748 aa15.46■□□□□ 0.06
CHFR-221ENST00000542714 ZC3H4Q9UPT8 1303 aaKnown RBP15.45■□□□□ 0.06
CHFR-221ENST00000542714 CCDC196A0A1B0GTZ2 297 aa15.45■□□□□ 0.06
CHFR-221ENST00000542714 UBE2Q2LH0YL09 131 aa15.45■□□□□ 0.06
CHFR-221ENST00000542714 CDKL5O76039 1030 aa15.45■□□□□ 0.06
CHFR-221ENST00000542714 F13A1P00488 732 aa15.45■□□□□ 0.06
CHFR-221ENST00000542714 FOSBP53539 338 aa15.45■□□□□ 0.06
CHFR-221ENST00000542714 CPLX2Q6PUV4 134 aaKnown RBP15.45■□□□□ 0.06
CHFR-221ENST00000542714 FAM184AQ8NB25 1140 aa15.45■□□□□ 0.06
CHFR-221ENST00000542714 CHAMP1Q96JM3 812 aa15.45■□□□□ 0.06
CHFR-221ENST00000542714 L3MBTL3Q96JM7 780 aaPredicted RBP15.45■□□□□ 0.06
CHFR-221ENST00000542714 DOCK1Q14185 1865 aa15.45■□□□□ 0.06
CHFR-221ENST00000542714 CNTNAP5Q8WYK1 1306 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 PAPPA2Q9BXP8 1791 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 VPS37CA5D8V6 355 aaPredicted RBP15.44■□□□□ 0.06
CHFR-221ENST00000542714 SSRP1Q08945 709 aaKnown RBP15.44■□□□□ 0.06
CHFR-221ENST00000542714 SEPT2Q15019 361 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 ABCB5Q2M3G0 1257 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 SLC35G1Q2M3R5 365 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 TMEM179Q6ZVK1 233 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 SIAH1Q8IUQ4 282 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 APOBEC3FQ8IUX4 373 aaKnown RBP15.44■□□□□ 0.06
CHFR-221ENST00000542714 LRRC47Q8N1G4 583 aaKnown RBP15.44■□□□□ 0.06
CHFR-221ENST00000542714 SRBD1Q8N5C6 995 aaKnown RBP15.44■□□□□ 0.06
CHFR-221ENST00000542714 AIFM3Q96NN9 605 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 SLC26A6Q9BXS9 759 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 ADARB2Q9NS39 739 aaKnown RBP15.44■□□□□ 0.06
CHFR-221ENST00000542714 GGA3Q9NZ52 723 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 MAD2L2Q9UI95 211 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 SSC5DA1L4H1 1573 aa15.44■□□□□ 0.06
CHFR-221ENST00000542714 BAZ2BQ9UIF8 2168 aaKnown RBP15.43■□□□□ 0.06
CHFR-221ENST00000542714 BAG4O95429 457 aaKnown RBP15.43■□□□□ 0.06
CHFR-221ENST00000542714 TTLL1O95922 423 aa15.43■□□□□ 0.06
CHFR-221ENST00000542714 GH2P01242 217 aa15.43■□□□□ 0.06
CHFR-221ENST00000542714 LMOD1P29536 600 aaPredicted RBP15.43■□□□□ 0.06
CHFR-221ENST00000542714 MIGA2Q7L4E1 593 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms