RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 MBD3O95983 291 aa18.49■□□□□ 0.55
USP5-207ENST00000542371 TOP1P11387 765 aaKnown RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 NCLP19338 710 aaKnown RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 SHMT1P34896 483 aa18.49■□□□□ 0.55
USP5-207ENST00000542371 EIF6P56537 245 aaKnown RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 DNM1Q05193 864 aaKnown RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 TRIM29Q14134 588 aa18.49■□□□□ 0.55
USP5-207ENST00000542371 SPDYE2Q495Y8 402 aa18.49■□□□□ 0.55
USP5-207ENST00000542371 FERMT3Q86UX7 667 aa18.49■□□□□ 0.55
USP5-207ENST00000542371 DPF2Q92785 391 aa18.49■□□□□ 0.55
USP5-207ENST00000542371 PHKBQ93100 1093 aa18.49■□□□□ 0.55
USP5-207ENST00000542371 ZBED3Q96IU2 234 aaPredicted RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 TMEM47Q9BQJ4 181 aa18.49■□□□□ 0.55
USP5-207ENST00000542371 SCAND2PQ9GZW5 306 aaPredicted RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 RBM27Q9P2N5 1060 aaKnown RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 ZNF70Q9UC06 446 aaPredicted RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
USP5-207ENST00000542371 ZNF280AP59817 542 aaPredicted RBP18.48■□□□□ 0.55
USP5-207ENST00000542371 FUT2Q10981 343 aa18.48■□□□□ 0.55
USP5-207ENST00000542371 GRM4Q14833 912 aa18.48■□□□□ 0.55
USP5-207ENST00000542371 BRAPQ7Z569 592 aa18.48■□□□□ 0.55
USP5-207ENST00000542371 ZFPM1Q8IX07 1006 aa18.48■□□□□ 0.55
USP5-207ENST00000542371 FAM151AQ8WW52 585 aa18.48■□□□□ 0.55
USP5-207ENST00000542371 LZTS2Q9BRK4 669 aa18.48■□□□□ 0.55
USP5-207ENST00000542371 CFAP45Q9UL16 551 aa18.48■□□□□ 0.55
USP5-207ENST00000542371 CNPY2Q9Y2B0 182 aa18.48■□□□□ 0.55
USP5-207ENST00000542371 DDX49Q9Y6V7 483 aaKnown RBP18.48■□□□□ 0.55
USP5-207ENST00000542371 ELP1O95163 1332 aa18.48■□□□□ 0.55
USP5-207ENST00000542371 SIPA1L1O43166 1804 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 DDTLA6NHG4 134 aaPredicted RBP18.47■□□□□ 0.55
USP5-207ENST00000542371 MYO1BO43795 1136 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 CACNB3P54284 484 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 RASSF7Q02833 373 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 TCP10Q12799 353 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 TATDN1Q6P1N9 297 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 SH3BP5LQ7L8J4 393 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 USP48Q86UV5 1035 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 FAM83AQ86UY5 434 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 ZSCAN29Q8IWY8 852 aaPredicted RBP18.47■□□□□ 0.55
USP5-207ENST00000542371 ZNF396Q96N95 335 aaPredicted RBP18.47■□□□□ 0.55
USP5-207ENST00000542371 TRIM34Q9BYJ4 488 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 STX8Q9UNK0 236 aa18.47■□□□□ 0.55
USP5-207ENST00000542371 AKR1B1P15121 316 aa18.46■□□□□ 0.55
USP5-207ENST00000542371 XBP1P17861 261 aa18.46■□□□□ 0.55
USP5-207ENST00000542371 SMARCA1P28370 1054 aa18.46■□□□□ 0.55
USP5-207ENST00000542371 FOXD4L6Q3SYB3 417 aaPredicted RBP18.46■□□□□ 0.55
USP5-207ENST00000542371 KRT40Q6A162 431 aa18.46■□□□□ 0.55
USP5-207ENST00000542371 FOXD4L3Q6VB84 417 aaPredicted RBP18.46■□□□□ 0.55
USP5-207ENST00000542371 CEP95Q96GE4 821 aa18.46■□□□□ 0.55
USP5-207ENST00000542371 CHAMP1Q96JM3 812 aa18.46■□□□□ 0.55
USP5-207ENST00000542371 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.46■□□□□ 0.55
USP5-207ENST00000542371 MTMR4Q9NYA4 1195 aa18.46■□□□□ 0.55
USP5-207ENST00000542371 HERC5Q9UII4 1024 aaKnown RBP18.46■□□□□ 0.55
USP5-207ENST00000542371 TCHHQ07283 1943 aa18.46■□□□□ 0.55
USP5-207ENST00000542371 GREB1LQ9C091 1923 aaPredicted RBP18.46■□□□□ 0.55
USP5-207ENST00000542371 MYH15Q9Y2K3 1946 aa18.45■□□□□ 0.54
USP5-207ENST00000542371 PPFIA3O75145 1194 aa18.45■□□□□ 0.54
USP5-207ENST00000542371 FOSBP53539 338 aa18.45■□□□□ 0.54
USP5-207ENST00000542371 GUCY1B3Q02153 619 aa18.45■□□□□ 0.54
USP5-207ENST00000542371 FHDC1Q9C0D6 1143 aaPredicted RBP18.45■□□□□ 0.54
USP5-207ENST00000542371 MYOZ2Q9NPC6 264 aa18.45■□□□□ 0.54
USP5-207ENST00000542371 PALM3A6NDB9 673 aaPredicted RBP18.44■□□□□ 0.54
USP5-207ENST00000542371 PLEKHA8P1O95397 391 aa18.44■□□□□ 0.54
USP5-207ENST00000542371 TTLL1O95922 423 aa18.44■□□□□ 0.54
USP5-207ENST00000542371 UBE2HP62256 183 aa18.44■□□□□ 0.54
USP5-207ENST00000542371 KIF23Q02241 960 aaPredicted RBP18.44■□□□□ 0.54
USP5-207ENST00000542371 SAFBQ15424 915 aaKnown RBP eCLIP18.44■□□□□ 0.54
USP5-207ENST00000542371 SRBD1Q8N5C6 995 aaKnown RBP18.44■□□□□ 0.54
USP5-207ENST00000542371 DNAJC18Q9H819 358 aa18.44■□□□□ 0.54
USP5-207ENST00000542371 CNTNAP5Q8WYK1 1306 aa18.44■□□□□ 0.54
USP5-207ENST00000542371 MYH6P13533 1939 aa18.43■□□□□ 0.54
USP5-207ENST00000542371 DICER1Q9UPY3 1922 aaKnown RBP18.43■□□□□ 0.54
USP5-207ENST00000542371 FIBPO43427 364 aa18.43■□□□□ 0.54
USP5-207ENST00000542371 LMNB1P20700 586 aa18.43■□□□□ 0.54
USP5-207ENST00000542371 TNNI2P48788 182 aa18.43■□□□□ 0.54
USP5-207ENST00000542371 PRELPP51888 382 aa18.43■□□□□ 0.54
USP5-207ENST00000542371 CERKLQ49MI3 558 aaPredicted RBP18.43■□□□□ 0.54
USP5-207ENST00000542371 FAM177A1Q8N128 213 aaPredicted RBP18.43■□□□□ 0.54
USP5-207ENST00000542371 AIFM3Q96NN9 605 aa18.43■□□□□ 0.54
USP5-207ENST00000542371 MAD2L2Q9UI95 211 aa18.43■□□□□ 0.54
USP5-207ENST00000542371 CLRN2A0PK11 232 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 TCP10L2B9ZVM9 353 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 WNT10BO00744 389 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 TBC1D12O60347 775 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 U2AF2P26368 475 aaKnown RBP eCLIP18.42■□□□□ 0.54
USP5-207ENST00000542371 GSE1Q14687 1217 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 PKN1Q16512 942 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 OTUD7BQ6GQQ9 843 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 FAM173BQ6P4H8 233 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 ARHGAP27Q6ZUM4 889 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 CMTR1Q8N1G2 835 aaKnown RBP18.42■□□□□ 0.54
USP5-207ENST00000542371 CCDC82Q8N4S0 544 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 CSRNP1Q96S65 589 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 KANSL2Q9H9L4 492 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 GDPD2Q9HCC8 539 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 V9GY48 417 aaPredicted RBP18.42■□□□□ 0.54
USP5-207ENST00000542371 CNTNAP1P78357 1384 aa18.42■□□□□ 0.54
USP5-207ENST00000542371 MMP1P03956 469 aa18.41■□□□□ 0.54
USP5-207ENST00000542371 PARP1P09874 1014 aaKnown RBP18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms