RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 ZBTB43O43298 467 aa17.08■□□□□ 0.32
DDX11-219ENST00000542242 PRDM1O75626 825 aa17.08■□□□□ 0.32
DDX11-219ENST00000542242 F13A1P00488 732 aa17.08■□□□□ 0.32
DDX11-219ENST00000542242 METAP2P50579 478 aaKnown RBP eCLIP17.08■□□□□ 0.32
DDX11-219ENST00000542242 MLLT1Q03111 559 aaPredicted RBP17.08■□□□□ 0.32
DDX11-219ENST00000542242 EVX2Q03828 476 aa17.08■□□□□ 0.32
DDX11-219ENST00000542242 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.32
DDX11-219ENST00000542242 CDCA5Q96FF9 252 aa17.08■□□□□ 0.32
DDX11-219ENST00000542242 ZNF70Q9UC06 446 aaPredicted RBP17.08■□□□□ 0.32
DDX11-219ENST00000542242 SAP30BPQ9UHR5 308 aaKnown RBP17.08■□□□□ 0.32
DDX11-219ENST00000542242 CNTNAP1P78357 1384 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 FLT1P17948 1338 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 RASSF10A6NK89 507 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 GOLGA8AA7E2F4 631 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 CPLX1O14810 134 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 NT5C2P49902 561 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 APOBEC3FQ8IUX4 373 aaKnown RBP17.07■□□□□ 0.32
DDX11-219ENST00000542242 SULF1Q8IWU6 871 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 TDRD3Q9H7E2 651 aaKnown RBP17.07■□□□□ 0.32
DDX11-219ENST00000542242 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 SLC12A7Q9Y666 1083 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 TLL2Q9Y6L7 1015 aa17.07■□□□□ 0.32
DDX11-219ENST00000542242 TNKSO95271 1327 aa17.06■□□□□ 0.32
DDX11-219ENST00000542242 CELF2O95319 508 aaKnown RBP17.06■□□□□ 0.32
DDX11-219ENST00000542242 SEC23AQ15436 765 aa17.06■□□□□ 0.32
DDX11-219ENST00000542242 CPLX2Q6PUV4 134 aaKnown RBP17.06■□□□□ 0.32
DDX11-219ENST00000542242 SAPCD2Q86UD0 394 aa17.06■□□□□ 0.32
DDX11-219ENST00000542242 MICU3Q86XE3 530 aa17.06■□□□□ 0.32
DDX11-219ENST00000542242 TEPSINQ96N21 525 aa17.06■□□□□ 0.32
DDX11-219ENST00000542242 ZSCAN10Q96SZ4 725 aaPredicted RBP17.06■□□□□ 0.32
DDX11-219ENST00000542242 USP40Q9NVE5 1235 aa17.06■□□□□ 0.32
DDX11-219ENST00000542242 CLRN2A0PK11 232 aa17.05■□□□□ 0.32
DDX11-219ENST00000542242 FKBP1CQ5VVH2 108 aa17.05■□□□□ 0.32
DDX11-219ENST00000542242 DYNLL2Q96FJ2 89 aa17.05■□□□□ 0.32
DDX11-219ENST00000542242 DEFB129Q9H1M3 183 aa17.05■□□□□ 0.32
DDX11-219ENST00000542242 SIPA1L1O43166 1804 aa17.05■□□□□ 0.32
DDX11-219ENST00000542242 NID2Q14112 1375 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 MYH8P13535 1937 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 TSPY2A6NKD2 308 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 H3BQV1 296 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 TRAK2O60296 914 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 CDKL5O76039 1030 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 RXRAP19793 462 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 RCAN1P53805 252 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 PRAMEF18Q5VWM3 479 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 CDC42EP5Q6NZY7 148 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 ZNF654Q8IZM8 581 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 ABHD8Q96I13 439 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 CHAMP1Q96JM3 812 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 MYL10Q9BUA6 226 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 MKNK2Q9HBH9 465 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 ZNF287Q9HBT7 754 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 ORC3Q9UBD5 711 aaPredicted RBP17.04■□□□□ 0.32
DDX11-219ENST00000542242 PPP2R3BQ9Y5P8 575 aa17.04■□□□□ 0.32
DDX11-219ENST00000542242 PLCD1P51178 756 aa17.03■□□□□ 0.32
DDX11-219ENST00000542242 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDX11-219ENST00000542242 LBX1P52954 281 aa17.03■□□□□ 0.32
DDX11-219ENST00000542242 FOSBP53539 338 aa17.03■□□□□ 0.32
DDX11-219ENST00000542242 MAP2K1Q02750 393 aaPredicted RBP17.03■□□□□ 0.32
DDX11-219ENST00000542242 PICALMQ13492 652 aa17.03■□□□□ 0.32
DDX11-219ENST00000542242 SKOR2Q2VWA4 1001 aaPredicted RBP17.03■□□□□ 0.32
DDX11-219ENST00000542242 FOXD4L6Q3SYB3 417 aaPredicted RBP17.03■□□□□ 0.32
DDX11-219ENST00000542242 FAM47AQ5JRC9 791 aa17.03■□□□□ 0.32
DDX11-219ENST00000542242 IFIT1BQ5T764 474 aaKnown RBP17.03■□□□□ 0.32
DDX11-219ENST00000542242 FOXD4L3Q6VB84 417 aaPredicted RBP17.03■□□□□ 0.32
DDX11-219ENST00000542242 CDAN1Q8IWY9 1227 aa17.03■□□□□ 0.32
DDX11-219ENST00000542242 CCDC144CPQ8IYA2 1237 aa17.03■□□□□ 0.32
DDX11-219ENST00000542242 ENAHQ8N8S7 591 aaPredicted RBP17.03■□□□□ 0.32
DDX11-219ENST00000542242 HHIPL1Q96JK4 782 aa17.03■□□□□ 0.32
DDX11-219ENST00000542242 BEGAINQ9BUH8 593 aa17.03■□□□□ 0.32
DDX11-219ENST00000542242 MYH6P13533 1939 aa17.02■□□□□ 0.32
DDX11-219ENST00000542242 MYH15Q9Y2K3 1946 aa17.02■□□□□ 0.32
DDX11-219ENST00000542242 MYO1BO43795 1136 aa17.02■□□□□ 0.32
DDX11-219ENST00000542242 WDHD1O75717 1129 aaPredicted RBP17.02■□□□□ 0.32
DDX11-219ENST00000542242 CDC27P30260 824 aa17.02■□□□□ 0.32
DDX11-219ENST00000542242 ADD1P35611 737 aaKnown RBP17.02■□□□□ 0.32
DDX11-219ENST00000542242 RASA3Q14644 834 aa17.02■□□□□ 0.32
DDX11-219ENST00000542242 RTN1Q16799 776 aa17.02■□□□□ 0.32
DDX11-219ENST00000542242 CCDC178Q5BJE1 867 aa17.02■□□□□ 0.32
DDX11-219ENST00000542242 C16orf86Q6ZW13 317 aa17.02■□□□□ 0.32
DDX11-219ENST00000542242 ZNF444Q8N0Y2 327 aaPredicted RBP17.02■□□□□ 0.32
DDX11-219ENST00000542242 GBA2Q9HCG7 927 aaPredicted RBP17.02■□□□□ 0.32
DDX11-219ENST00000542242 LMBRD1Q9NUN5 540 aa17.02■□□□□ 0.32
DDX11-219ENST00000542242 PPFIA3O75145 1194 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 FDPSP14324 419 aaKnown RBP17.01■□□□□ 0.31
DDX11-219ENST00000542242 CDK8P49336 464 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 CACNB3P54284 484 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 TFAP4Q01664 338 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 MAP3K11Q16584 847 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 CATIPQ7Z7H3 387 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 FERMT3Q86UX7 667 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 FAM83AQ86UY5 434 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 SLC44A5Q8NCS7 719 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 NUP133Q8WUM0 1156 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 IDI2Q9BXS1 227 aa17.01■□□□□ 0.31
DDX11-219ENST00000542242 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
DDX11-219ENST00000542242 FAM217BQ9NTX9 383 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms