RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 CTCFLQ8NI51 663 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 FAM76AQ8TAV0 307 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 SNX29Q8TEQ0 813 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 JAKMIP2Q96AA8 810 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 KLRG1Q96E93 195 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 SAAL1Q96ER3 474 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 OSBPL9Q96SU4 736 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 GAS2L1Q99501 681 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 MPHOSPH6Q99547 160 aaKnown RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 DUSP9Q99956 384 aaKnown RBP4.98□□□□□ -1.61
SNHG1-219ENST00000542112 RUBCNLQ9H714 662 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 KCNMB2Q9Y691 235 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 ADGBQ8N7X0 1667 aa4.98□□□□□ -1.61
SNHG1-219ENST00000542112 MYBBP1AQ9BQG0 1328 aaKnown RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 PTPRKQ15262 1439 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 TTC37Q6PGP7 1564 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 RPAP1Q9BWH6 1393 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 KIF15Q9NS87 1388 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 EIF1AYO14602 144 aaKnown RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 LIN7AO14910 233 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 ZSCAN9O15535 394 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 AHCYL1O43865 530 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 CPNE3O75131 537 aaKnown RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 HMMRO75330 724 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 TNFRSF21O75509 655 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 ERLIN2O94905 339 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 SLU7O95391 586 aaKnown RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 EGFRP00533 1210 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 TUBBP07437 444 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 PNMA6AP0CW24 399 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 TCF3P15923 654 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 GPTP24298 496 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 FLT3P36888 993 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 PSMD7P51665 324 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 SH3BGRP55822 239 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 KCNQ4P56696 695 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 LMNB2Q03252 620 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 IFT88Q13099 833 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 PSMD2Q13200 908 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 SLC4A8Q2Y0W8 1093 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 CCDC184Q52MB2 194 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 MICALCLQ6ZW33 695 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 GET4Q7L5D6 327 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 MAB21L3Q8N8X9 362 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 ANKRD24Q8TF21 1146 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 KIFC2Q96AC6 838 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 PPP1R14BQ96C90 147 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 CABS1Q96KC9 395 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 UNC45AQ9H3U1 944 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 NRDE2Q9H7Z3 1164 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 SENP2Q9HC62 589 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 BRD7Q9NPI1 651 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 AAASQ9NRG9 546 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 PARP2Q9UGN5 583 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 ATP8A1Q9Y2Q0 1164 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 FHOD1Q9Y613 1164 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 RTEL1-TNFRSF6BF6WH68 1400 aa4.97□□□□□ -1.61
SNHG1-219ENST00000542112 BLMP54132 1417 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-219ENST00000542112 REREQ9P2R6 1566 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 CAMSAP2Q08AD1 1489 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 GPRASP1Q5JY77 1395 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 SENP3-EIF4A1A0A087X0R7 540 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 SHTN1A0MZ66 631 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 K7ELQ4 463 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 U2SURPO15042 1029 aaKnown RBP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 ERC2O15083 957 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 ATXN7O15265 892 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 SORBS3O60504 671 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 PPFIA4O75335 1185 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 RECKO95980 971 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 FESP07332 822 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 FAM163BP0C2L3 166 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 FAM157BP0CG42 384 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 GNA15P30679 374 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 ORC1Q13415 861 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 LAMC2Q13753 1193 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 POSTNQ15063 836 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 PLCB4Q15147 1175 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 TRIP4Q15650 581 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 SEPT14Q6ZU15 432 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 SPATA21Q7Z572 469 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 APBB1IPQ7Z5R6 666 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 FAM114A1Q8IWE2 563 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 TRIM42Q8IWZ5 723 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 AMOTL1Q8IY63 956 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 ATL2Q8NHH9 583 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 MICAL1Q8TDZ2 1067 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 ZFAND2BQ8WV99 257 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 PMEPA1Q969W9 287 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 GMCL1Q96IK5 515 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 TRERF1Q96PN7 1200 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 ELP3Q9H9T3 547 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 LUC7LQ9NQ29 371 aaKnown RBP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 LMBRD1Q9NUN5 540 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 TUBA8Q9NY65 449 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 RGL1Q9NZL6 768 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 WWC3Q9ULE0 1092 aa4.96□□□□□ -1.62
SNHG1-219ENST00000542112 BARX2Q9UMQ3 279 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-219ENST00000542112 WDR37Q9Y2I8 494 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms