RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 PRC1O43663 620 aa18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 PTPRAP18433 802 aa18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 SEPT2Q15019 361 aa18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 SART3Q15020 963 aaKnown RBP18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 IGDCC4Q8TDY8 1250 aa18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 MKL1Q969V6 931 aa18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 HHIPL1Q96JK4 782 aa18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 ZSCAN10Q96SZ4 725 aaPredicted RBP18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 WDR18Q9BV38 432 aa18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 SYNPO2Q9UMS6 1093 aa18.3■□□□□ 0.52
LRTOMT-219ENST00000541899 COL9A3Q14050 684 aaPredicted RBP18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 RABEP1Q15276 862 aa18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 SEC23AQ15436 765 aa18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 SHROOM1Q2M3G4 852 aaPredicted RBP18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 SAPCD2Q86UD0 394 aa18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 ERO1BQ86YB8 467 aa18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 TMTC2Q8N394 836 aa18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 CEP95Q96GE4 821 aa18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 UBAC1Q9BSL1 405 aa18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 AGXT2Q9BYV1 514 aa18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 TLL2Q9Y6L7 1015 aa18.29■□□□□ 0.52
LRTOMT-219ENST00000541899 SPDYE5A6NIY4 337 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 TTLL1O95922 423 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 LIFRP42702 1097 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 APLP1P51693 650 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 PPATQ06203 517 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 RAB3GAP1Q15042 981 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 RCSD1Q6JBY9 416 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 SIAH1Q8IUQ4 282 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 SLC10A4Q96EP9 437 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 AS3MTQ9HBK9 375 aa18.28■□□□□ 0.52
LRTOMT-219ENST00000541899 MYH4Q9Y623 1939 aa18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 TNKSO95271 1327 aa18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 ERICH2A1L162 156 aa18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 IFIT3O14879 490 aaKnown RBP18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 NMT2O60551 498 aa18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 HUNKP57058 714 aa18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 ICA1Q05084 483 aa18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 ENAHQ8N8S7 591 aaPredicted RBP18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 CLMNQ96JQ2 1002 aa18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 AFG3L2Q9Y4W6 797 aa18.27■□□□□ 0.52
LRTOMT-219ENST00000541899 SH2B2O14492 632 aaPredicted RBP18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 EEF2P13639 858 aaKnown RBP18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 CPA1P15085 419 aa18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 SGMS1Q86VZ5 419 aa18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 ZKSCAN3Q9BRR0 538 aa18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 UPF3BQ9BZI7 483 aaKnown RBP18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 ELP3Q9H9T3 547 aa18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 ARHGEF10LQ9HCE6 1279 aa18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 CREBZFQ9NS37 354 aa18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 PDRG1Q9NUG6 133 aa18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 TMX2Q9Y320 296 aa18.26■□□□□ 0.51
LRTOMT-219ENST00000541899 CXCL11O14625 94 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 TOP1P11387 765 aaKnown RBP18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 NEK4P51957 841 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 PPIL2Q13356 520 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 WTAPQ15007 396 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 TMEM67Q5HYA8 995 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 IFIT1BQ5T764 474 aaKnown RBP18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 ZNF280CQ8ND82 737 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 SH2D4AQ9H788 454 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 LY9Q9HBG7 655 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 CLIP2Q9UDT6 1046 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 ZHX2Q9Y6X8 837 aa18.25■□□□□ 0.51
LRTOMT-219ENST00000541899 C19orf81C9J6K1 198 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 ZBTB48P10074 688 aaPredicted RBP18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 EVCP57679 992 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 ANKRD1Q15327 319 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 RGMBQ6NW40 437 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 Q6ZUG5 572 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 OPTNQ96CV9 577 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 TMEM47Q9BQJ4 181 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 KIAA1683Q9H0B3 1180 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 STX8Q9UNK0 236 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 KCNH4Q9UQ05 1017 aa18.24■□□□□ 0.51
LRTOMT-219ENST00000541899 A0A1W2PRG0 241 aa18.23■□□□□ 0.51
LRTOMT-219ENST00000541899 USP17L10C9JJH3 530 aa18.23■□□□□ 0.51
LRTOMT-219ENST00000541899 BACE1P56817 501 aa18.23■□□□□ 0.51
LRTOMT-219ENST00000541899 SH3D19Q5HYK7 790 aa18.23■□□□□ 0.51
LRTOMT-219ENST00000541899 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
LRTOMT-219ENST00000541899 LRRC2Q9BYS8 371 aa18.23■□□□□ 0.51
LRTOMT-219ENST00000541899 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.23■□□□□ 0.51
LRTOMT-219ENST00000541899 PTPRFP10586 1907 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 USP14P54578 494 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 FGD1P98174 961 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 SPP2Q13103 211 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 TOB2Q14106 344 aaPredicted RBP18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 CLEC10AQ8IUN9 316 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 ACER1Q8TDN7 264 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 CCDC102AQ96A19 550 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 WNK4Q96J92 1243 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 TCEANC2Q96MN5 208 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 MAP3K14Q99558 947 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 KAT14Q9H8E8 782 aa18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 ABT1Q9ULW3 272 aaKnown RBP18.22■□□□□ 0.51
LRTOMT-219ENST00000541899 RASSF10A6NK89 507 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 IRF6O14896 467 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 ST18O60284 1047 aa18.21■□□□□ 0.51
LRTOMT-219ENST00000541899 GJA5P36382 358 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms