RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 KRT12Q99456 494 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 CCDC68Q9H2F9 335 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 IPO11Q9UI26 975 aaKnown RBP11.87□□□□□ -0.51
GABRB3-204ENST00000541819 SETSIPP0DME0 302 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 ITGA6P23229 1130 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 GNPTABQ3T906 1256 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 ANO1Q5XXA6 986 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 DENND2CQ68D51 928 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 ZBTB8OSQ8IWT0 167 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 RNF169Q8NCN4 708 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 CUTAO60888 179 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 TNNC2P02585 160 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 RNF10Q8N5U6 811 aaKnown RBP11.87□□□□□ -0.51
GABRB3-204ENST00000541819 TBC1D7Q9P0N9 293 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 CSADQ9Y600 493 aa11.87□□□□□ -0.51
GABRB3-204ENST00000541819 V9GY48 417 aaPredicted RBP11.87□□□□□ -0.51
GABRB3-204ENST00000541819 HGSO14964 777 aaPredicted RBP11.86□□□□□ -0.51
GABRB3-204ENST00000541819 RPS6KA1Q15418 735 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 CCDC38Q502W7 563 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 PEX26Q7Z412 305 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 METTL13Q8N6R0 699 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 SCYL1Q96KG9 808 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 IWS1Q96ST2 819 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 NUCKS1Q9H1E3 243 aaKnown RBP11.86□□□□□ -0.51
GABRB3-204ENST00000541819 OGFRQ9NZT2 677 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 FAM8A1Q9UBU6 413 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 CFBP00751 764 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 GSTA1P08263 222 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 GSTA2P09210 222 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 INPP5BP32019 993 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 HADHQ16836 314 aaKnown RBP11.86□□□□□ -0.51
GABRB3-204ENST00000541819 KRBA2Q6ZNG9 492 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 CTAGE3PQ8IX95 158 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 GRK7Q8WTQ7 553 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 RAB17Q9H0T7 212 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 MLXIPQ9HAP2 919 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 GNA14O95837 355 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 RASSF2P50749 326 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 JADE1Q6IE81 842 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 FNBP4Q8N3X1 1017 aaPredicted RBP11.86□□□□□ -0.51
GABRB3-204ENST00000541819 ERO1AQ96HE7 468 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 RASSF4Q9H2L5 321 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 ST7Q9NRC1 585 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 RPS6KB1P23443 525 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 CLNS1AP54105 237 aaKnown RBP11.86□□□□□ -0.51
GABRB3-204ENST00000541819 CFAP221Q4G0U5 840 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 DYMQ7RTS9 669 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 SDCCAG3Q96C92 435 aa11.86□□□□□ -0.51
GABRB3-204ENST00000541819 MIER3Q7Z3K6 550 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 CABP7Q86V35 215 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 LRRC59Q96AG4 307 aaKnown RBP11.85□□□□□ -0.51
GABRB3-204ENST00000541819 CHMP6Q96FZ7 201 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 MAPK8IP1Q9UQF2 711 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 ARHGAP25P42331 645 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 WHAMMQ8TF30 809 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 INTS4Q96HW7 963 aaKnown RBP11.85□□□□□ -0.51
GABRB3-204ENST00000541819 SEPT10Q9P0V9 454 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 KDM3AQ9Y4C1 1321 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 PDE8AO60658 829 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 MAGEA1P43355 309 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 PRIM1P49642 420 aaKnown RBP11.85□□□□□ -0.51
GABRB3-204ENST00000541819 PPFIA1Q13136 1202 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 LONRF2Q1L5Z9 754 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 NELFCDQ8IXH7 590 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 SKA2Q8WVK7 121 aaPredicted RBP11.85□□□□□ -0.51
GABRB3-204ENST00000541819 IQCDQ96DY2 449 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 CSRNP1Q96S65 589 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 MIS12Q9H081 205 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 NBPF3Q9H094 633 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
GABRB3-204ENST00000541819 FLT4P35916 1363 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 RNF40O75150 1001 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 FAM102BQ5T8I3 360 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 ARHGEF16Q5VV41 709 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 SCYL2Q6P3W7 929 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 ADPGKQ9BRR6 497 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 RIC8AQ9NPQ8 531 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 ARHGAP44Q17R89 818 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 TMTC1Q8IUR5 882 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 MLKLQ8NB16 471 aa11.85□□□□□ -0.51
GABRB3-204ENST00000541819 H7C1D1 291 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 POLR2DO15514 142 aaKnown RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 MTHFSDQ2M296 383 aaKnown RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 NT5C3AQ9H0P0 336 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 SMIM24O75264 130 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 POLR2BP30876 1174 aaKnown RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 GARSP41250 739 aaKnown RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 DLGAP5Q15398 846 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 CCDC93Q567U6 631 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 POMGNT1Q8WZA1 660 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 LLPHQ9BRT6 129 aaKnown RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 XPAP23025 273 aaPredicted RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 ATP6V1E1P36543 226 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 COG7P83436 770 aa11.84□□□□□ -0.51
GABRB3-204ENST00000541819 TSTA3Q13630 321 aaPredicted RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 EIF4A2Q14240 407 aaKnown RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 TYW5A2RUC4 315 aaKnown RBP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 PABPC4Q13310 644 aaKnown RBP eCLIP11.84□□□□□ -0.51
GABRB3-204ENST00000541819 PRPSAP1Q14558 356 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms