RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 MRM1Q6IN84 353 aaKnown RBP6.74□□□□□ -1.33
DDB1-219ENST00000541513 MMS22LQ6ZRQ5 1243 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 CCDC84Q86UT8 332 aaPredicted RBP6.74□□□□□ -1.33
DDB1-219ENST00000541513 LRRTM3Q86VH5 581 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 FAM178BQ8IXR5 827 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 IFNL2Q8IZJ0 200 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 PPM1KQ8N3J5 372 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 PI4K2BQ8TCG2 481 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 SKA1Q96BD8 255 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 MPP4Q96JB8 637 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 ESYT1Q9BSJ8 1104 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 TCF7L1Q9HCS4 588 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 PLCB1Q9NQ66 1216 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 WBP1LQ9NX94 342 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 GTF2IRD1Q9UHL9 959 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 TLR6Q9Y2C9 796 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 AKAP2Q9Y2D5 859 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 RABGAP1Q9Y3P9 1069 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 NPATQ14207 1427 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 SPATA31D1Q6ZQQ2 1576 aa6.74□□□□□ -1.33
DDB1-219ENST00000541513 ZMYM3Q14202 1370 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 GABRDO14764 452 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 PIP5K1CO60331 668 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 BRINP1O60477 761 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 ZPR1O75312 459 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 DDAH1O94760 285 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 ARAFP10398 606 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 EPB42P16452 691 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 VEGFBP49765 207 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 GJA9P57773 515 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 KCNC4Q03721 635 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 DHCR24Q15392 516 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 PUM3Q15397 648 aaKnown RBP6.73□□□□□ -1.33
DDB1-219ENST00000541513 DACT2Q5SW24 774 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 SH3PXD2AQ5TCZ1 1133 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 HGSNATQ68CP4 663 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 PDXDC1Q6P996 788 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 AGMOQ6ZNB7 445 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 CYP2U1Q7Z449 544 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 SPATS2Q86XZ4 545 aaKnown RBP6.73□□□□□ -1.33
DDB1-219ENST00000541513 ZNF354CQ86Y25 554 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 ZNF295-AS1Q8N0V1 137 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 ZDHHC1Q8WTX9 485 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 KISS1RQ969F8 398 aaPredicted RBP6.73□□□□□ -1.33
DDB1-219ENST00000541513 TIFAQ96CG3 184 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 GPR101Q96P66 508 aaPredicted RBP6.73□□□□□ -1.33
DDB1-219ENST00000541513 SERINC2Q96SA4 455 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 FBRSQ9HAH7 460 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 FRMD4BQ9Y2L6 1034 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 IPPQ9Y573 584 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 SPHKAPQ2M3C7 1700 aa6.73□□□□□ -1.33
DDB1-219ENST00000541513 ZNF142P52746 1687 aaPredicted RBP6.72□□□□□ -1.33
DDB1-219ENST00000541513 B2RBV5 119 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 C9IYK1 514 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 HIP1RO75146 1068 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 RPS26P62854 115 aaKnown RBP6.72□□□□□ -1.33
DDB1-219ENST00000541513 MAP7Q14244 749 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 C6orf15Q6UXA7 325 aaPredicted RBP6.72□□□□□ -1.33
DDB1-219ENST00000541513 EEPD1Q7L9B9 569 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 ZNF438Q7Z4V0 828 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 TRIM42Q8IWZ5 723 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 LRRC47Q8N1G4 583 aaKnown RBP6.72□□□□□ -1.33
DDB1-219ENST00000541513 USP33Q8TEY7 942 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 BAP1Q92560 729 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 CCDC8Q9H0W5 538 aaPredicted RBP6.72□□□□□ -1.33
DDB1-219ENST00000541513 EPN3Q9H201 632 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 LUC7LQ9NQ29 371 aaKnown RBP6.72□□□□□ -1.33
DDB1-219ENST00000541513 PRDM9Q9NQV7 894 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 C9orf78Q9NZ63 289 aaPredicted RBP6.72□□□□□ -1.33
DDB1-219ENST00000541513 BCS1LQ9Y276 419 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 FNDC3AQ9Y2H6 1198 aaKnown RBP6.72□□□□□ -1.33
DDB1-219ENST00000541513 LUC7L2Q9Y383 392 aaKnown RBP6.72□□□□□ -1.33
DDB1-219ENST00000541513 HCN4Q9Y3Q4 1203 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 ERVK-7P63135 1459 aa6.72□□□□□ -1.33
DDB1-219ENST00000541513 NOS1P29475 1434 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 DYTNA2CJ06 578 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 FAM83GA6ND36 823 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 TFE3P19532 575 aaPredicted RBP6.71□□□□□ -1.34
DDB1-219ENST00000541513 POU3F2P20265 443 aaPredicted RBP6.71□□□□□ -1.34
DDB1-219ENST00000541513 MPP2Q14168 576 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 STAT4Q14765 748 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 SAFBQ15424 915 aaKnown RBP eCLIP6.71□□□□□ -1.34
DDB1-219ENST00000541513 MAP3K11Q16584 847 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 SLC4A8Q2Y0W8 1093 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 MINDY4Q4G0A6 757 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 SYDE2Q5VT97 1194 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 CC2D1AQ6P1N0 951 aaPredicted RBP6.71□□□□□ -1.34
DDB1-219ENST00000541513 LHFPL2Q6ZUX7 228 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 GET4Q7L5D6 327 aaPredicted RBP6.71□□□□□ -1.34
DDB1-219ENST00000541513 AHI1Q8N157 1196 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 DDX1Q92499 740 aaKnown RBP6.71□□□□□ -1.34
DDB1-219ENST00000541513 XAGE2Q96GT9 111 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 SCLT1Q96NL6 688 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 SPSB2Q99619 263 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 TRIM8Q9BZR9 551 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 PHACTR1Q9C0D0 580 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 CHRDQ9H2X0 955 aa6.71□□□□□ -1.34
DDB1-219ENST00000541513 DDX21Q9NR30 783 aaKnown RBP eCLIP6.71□□□□□ -1.34
DDB1-219ENST00000541513 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms