RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PRDX5P30044 214 aa11.83□□□□□ -0.52
YBX3-211ENST00000541351 Q3C1V9 767 aa11.83□□□□□ -0.52
YBX3-211ENST00000541351 SH3BP5LQ7L8J4 393 aa11.83□□□□□ -0.52
YBX3-211ENST00000541351 DZIP1Q86YF9 867 aaKnown RBP11.83□□□□□ -0.52
YBX3-211ENST00000541351 PRRX2Q99811 253 aa11.83□□□□□ -0.52
YBX3-211ENST00000541351 XPNPEP3Q9NQH7 507 aa11.83□□□□□ -0.52
YBX3-211ENST00000541351 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.83□□□□□ -0.52
YBX3-211ENST00000541351 GRXCR1A8MXD5 290 aa11.82□□□□□ -0.52
YBX3-211ENST00000541351 SEMA3EO15041 775 aa11.82□□□□□ -0.52
YBX3-211ENST00000541351 SPTY2D1Q68D10 685 aaPredicted RBP11.82□□□□□ -0.52
YBX3-211ENST00000541351 TSEN34Q9BSV6 310 aaKnown RBP11.82□□□□□ -0.52
YBX3-211ENST00000541351 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
YBX3-211ENST00000541351 PUS3Q9BZE2 481 aaKnown RBP11.82□□□□□ -0.52
YBX3-211ENST00000541351 STARD7Q9NQZ5 370 aa11.82□□□□□ -0.52
YBX3-211ENST00000541351 DENND2AQ9ULE3 1009 aa11.82□□□□□ -0.52
YBX3-211ENST00000541351 GAKO14976 1311 aa11.82□□□□□ -0.52
YBX3-211ENST00000541351 A0A1W2PQ45 241 aaPredicted RBP11.81□□□□□ -0.52
YBX3-211ENST00000541351 A0A1W2PQY0 241 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L15C9J2P7 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L13C9JLJ4 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L11C9JVI0 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L18D6R9N7 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L22D6RA61 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L17D6RBQ6 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L19D6RCP7 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L20D6RJB6 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 TLR3O15455 904 aaKnown RBP11.81□□□□□ -0.52
YBX3-211ENST00000541351 SSTR3P32745 418 aaPredicted RBP11.81□□□□□ -0.52
YBX3-211ENST00000541351 FAAP100Q0VG06 881 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L24Q0WX57 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 EPHA10Q5JZY3 1008 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 ANO1Q5XXA6 986 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 USP17L2Q6R6M4 530 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 GJD3Q8N144 294 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 TRPV1Q8NER1 839 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 LPIN2Q92539 896 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 FAM163AQ96GL9 167 aaPredicted RBP11.81□□□□□ -0.52
YBX3-211ENST00000541351 MFSD14AQ96MC6 490 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 PCDHA11Q9Y5I1 949 aa11.81□□□□□ -0.52
YBX3-211ENST00000541351 PLXNA1Q9UIW2 1896 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 RFX7Q2KHR2 1363 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 MOXD2PA6NHM9 499 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 FGBP02675 491 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 RALBP1Q15311 655 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 TWISTNBQ3B726 338 aaPredicted RBP11.8□□□□□ -0.52
YBX3-211ENST00000541351 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 ZNF365Q70YC5 407 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 G2E3Q7L622 706 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 NPLOC4Q8TAT6 608 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 LRRC37A2A6NM11 1700 aa11.8□□□□□ -0.52
YBX3-211ENST00000541351 CSF2RAP15509 400 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 BTDP43251 543 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 USP14P54578 494 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 LBX2Q6XYB7 198 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 VGLL2Q8N8G2 317 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 DHX36Q9H2U1 1008 aaKnown RBP11.79□□□□□ -0.52
YBX3-211ENST00000541351 IL23AQ9NPF7 189 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 PI4KBQ9UBF8 816 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 TBX21Q9UL17 535 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 MTCH2Q9Y6C9 303 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 SLC4A7Q9Y6M7 1214 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 NDUFB9Q9Y6M9 179 aa11.79□□□□□ -0.52
YBX3-211ENST00000541351 ALDH1L1O75891 902 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 LDHCP07864 332 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 ADORA2AP29274 412 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 PTPN5P54829 565 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 BEND3Q5T5X7 828 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 ERMP1Q7Z2K6 904 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 TSPYL6Q8N831 410 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 GLT1D1Q96MS3 346 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 IRF2BPLQ9H1B7 796 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 DDX4Q9NQI0 724 aaKnown RBP11.78□□□□□ -0.52
YBX3-211ENST00000541351 ZDBF2Q9HCK1 2354 aa11.78□□□□□ -0.52
YBX3-211ENST00000541351 FAM196BA6NMK8 535 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 DCXO43602 365 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 PEX10O60683 326 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 IGHA2P01877 340 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 FGFR2P21802 821 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 GSTO1P78417 241 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 PKN1Q16512 942 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 PUS10Q3MIT2 529 aaKnown RBP11.77□□□□□ -0.53
YBX3-211ENST00000541351 LRRC24Q50LG9 513 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 ATF7IPQ6VMQ6 1270 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 RPUSD2Q8IZ73 545 aaKnown RBP11.77□□□□□ -0.53
YBX3-211ENST00000541351 ABRAQ8N0Z2 381 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 KHSRPQ92945 711 aaKnown RBP eCLIP11.77□□□□□ -0.532e-7■■□□□ 13.3
YBX3-211ENST00000541351 FEZ1Q99689 392 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 FAM50BQ9Y247 325 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 YBX2Q9Y2T7 364 aaKnown RBP11.77□□□□□ -0.53
YBX3-211ENST00000541351 MYH13Q9UKX3 1938 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 ELP1O95163 1332 aa11.77□□□□□ -0.53
YBX3-211ENST00000541351 XIRP2A4UGR9 3374 aa11.76□□□□□ -0.53
YBX3-211ENST00000541351 ACRP10323 421 aa11.76□□□□□ -0.53
YBX3-211ENST00000541351 AKR1A1P14550 325 aa11.76□□□□□ -0.53
YBX3-211ENST00000541351 TMEM67Q5HYA8 995 aa11.76□□□□□ -0.53
YBX3-211ENST00000541351 C16orf59Q7L2K0 433 aa11.76□□□□□ -0.53
YBX3-211ENST00000541351 CRACR2BQ8N4Y2 399 aaPredicted RBP11.76□□□□□ -0.53
YBX3-211ENST00000541351 PCSK9Q8NBP7 692 aaKnown RBP11.76□□□□□ -0.53
YBX3-211ENST00000541351 SHCBP1Q8NEM2 672 aa11.76□□□□□ -0.53
YBX3-211ENST00000541351 C12orf42Q96LP6 360 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms