RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 ARHGAP45Q92619 1136 aa10.64□□□□□ -0.71
CLIP1-214ENST00000540539 ABCA3Q99758 1704 aa10.64□□□□□ -0.71
CLIP1-214ENST00000540539 ATP10DQ9P241 1426 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 PDLIM1O00151 329 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 CDC37Q16543 378 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-214ENST00000540539 TSHZ3Q63HK5 1081 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 LARP1BQ659C4 914 aaKnown RBP10.63□□□□□ -0.71
CLIP1-214ENST00000540539 ARHGEF25Q86VW2 580 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 SPOCK2Q92563 424 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 KCNN1Q92952 543 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 PIDD1Q9HB75 910 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 TMOD4Q9NZQ9 345 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 SPATA7Q9P0W8 599 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 ZNF219Q9P2Y4 722 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-214ENST00000540539 DNM1LO00429 736 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 PFKFB2O60825 505 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 ANP32DO95626 131 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 SKOR1P84550 965 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 SLMAPQ14BN4 828 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 INF2Q27J81 1249 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 NUGGCQ68CJ6 796 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 C6orf89Q6UWU4 347 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 MIPOL1Q8TD10 442 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 ZNF473Q8WTR7 871 aaKnown RBP10.63□□□□□ -0.71
CLIP1-214ENST00000540539 IL25Q9H293 177 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 OSBPL3Q9H4L5 887 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 ZFATQ9P243 1243 aa10.63□□□□□ -0.71
CLIP1-214ENST00000540539 COL22A1Q8NFW1 1626 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-214ENST00000540539 FLT4P35916 1363 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 COL3A1P02461 1466 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-214ENST00000540539 CTAGE15A4D2H0 777 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 GOLGA6L10A6NI86 522 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 MAP3K13O43283 966 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 CTAGE8P0CG41 777 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 ABL2P42684 1182 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 CEBPZQ03701 1054 aaKnown RBP10.62□□□□□ -0.71
CLIP1-214ENST00000540539 CTAGE6Q86UF2 777 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 CTAGE4Q8IX94 777 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 UNC45AQ9H3U1 944 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 MRPL44Q9H9J2 332 aaKnown RBP10.62□□□□□ -0.71
CLIP1-214ENST00000540539 HDAC6Q9UBN7 1215 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 TUBGCP6Q96RT7 1819 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 CPA1P15085 419 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 RPL13P26373 211 aaKnown RBP10.62□□□□□ -0.71
CLIP1-214ENST00000540539 HOXC9P31274 260 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 HSPA1LP34931 641 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 XRCC4Q13426 336 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 GALNT17Q6IS24 598 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 DESI2Q9BSY9 194 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 PCMTD2Q9NV79 361 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 GGA2Q9UJY4 613 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 TMEM98Q9Y2Y6 226 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 SNX14Q9Y5W7 946 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 KIF24Q5T7B8 1368 aa10.62□□□□□ -0.71
CLIP1-214ENST00000540539 DIAPH1O60610 1272 aaKnown RBP10.61□□□□□ -0.71
CLIP1-214ENST00000540539 U2AF1L5P0DN76 240 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-214ENST00000540539 HDLBPQ00341 1268 aaKnown RBP10.61□□□□□ -0.71
CLIP1-214ENST00000540539 U2AF1Q01081 240 aaKnown RBP eCLIP10.61□□□□□ -0.71
CLIP1-214ENST00000540539 CCDC57Q2TAC2 916 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 DPCR1Q3MIW9 517 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 CCDC121Q6ZUS5 278 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 FAM114A1Q8IWE2 563 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 ANKRD44Q8N8A2 993 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 HYPKQ9NX55 129 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 SLC5A4Q9NY91 659 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 BAIAP2L1Q9UHR4 511 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 FANCCQ00597 558 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 Q4G0T1 1027 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 TAX1BP1Q86VP1 789 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 MRPL50Q8N5N7 158 aaKnown RBP10.61□□□□□ -0.71
CLIP1-214ENST00000540539 IP6K1Q92551 441 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 KIAA0232Q92628 1395 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 DTNBP1Q96EV8 351 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 MAP3K5Q99683 1374 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 OSBPL7Q9BZF2 842 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 EPN3Q9H201 632 aa10.61□□□□□ -0.71
CLIP1-214ENST00000540539 CPDO75976 1380 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 A6NNZ2 444 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 CREB3O43889 395 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 NBPF7P0C2Y1 421 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-214ENST00000540539 LSP1P33241 339 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 GNAQP50148 359 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 AKAP17AQ02040 695 aaKnown RBP10.6□□□□□ -0.71
CLIP1-214ENST00000540539 PTPN21Q16825 1174 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 TUBB8Q3ZCM7 444 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 ANKRD20A8PQ5CZ79 823 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 CRELD2Q6UXH1 353 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-214ENST00000540539 CCAR1Q8IX12 1150 aaKnown RBP10.6□□□□□ -0.71
CLIP1-214ENST00000540539 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 TEKT4Q8WW24 435 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 SLC35B4Q969S0 331 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 AATFQ9NY61 560 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLIP1-214ENST00000540539 PHF24Q9UPV7 400 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 L3MBTL1Q9Y468 752 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 JCADQ9P266 1359 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 ATP1A3P13637 1013 aa10.6□□□□□ -0.71
CLIP1-214ENST00000540539 TMPOP42166 694 aaKnown RBP10.6□□□□□ -0.71
CLIP1-214ENST00000540539 ELF3P78545 371 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-214ENST00000540539 PRPF4BQ13523 1007 aaKnown RBP10.6□□□□□ -0.71
CLIP1-214ENST00000540539 GSPT2Q8IYD1 628 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms