RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 DDRGK1Q96HY6 314 aa25.24■■□□□ 1.63
CHFR-217ENST00000540537 PUS7LQ9H0K6 701 aaKnown RBP25.24■■□□□ 1.63
CHFR-217ENST00000540537 USP17L15C9J2P7 530 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 USP17L13C9JLJ4 530 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 USP17L11C9JVI0 530 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 USP17L18D6R9N7 530 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 USP17L22D6RA61 530 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 USP17L17D6RBQ6 530 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 USP17L19D6RCP7 530 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 USP17L20D6RJB6 530 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 MPHOSPH10O00566 681 aaKnown RBP25.23■■□□□ 1.63
CHFR-217ENST00000540537 GJB1P08034 283 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 ELNP15502 786 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 USP17L24Q0WX57 530 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 TSHZ3Q63HK5 1081 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 SLC44A5Q8NCS7 719 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 RNF208Q9H0X6 261 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 TXNRD2Q9NNW7 524 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 RBPJLQ9UBG7 517 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 SLC4A4Q9Y6R1 1079 aa25.23■■□□□ 1.63
CHFR-217ENST00000540537 TTC41PQ6P2S7 1318 aa25.22■■□□□ 1.63
CHFR-217ENST00000540537 INHAP05111 366 aa25.22■■□□□ 1.63
CHFR-217ENST00000540537 VCAM1P19320 739 aa25.22■■□□□ 1.63
CHFR-217ENST00000540537 C12orf60Q5U649 245 aa25.22■■□□□ 1.63
CHFR-217ENST00000540537 TMEM179Q6ZVK1 233 aa25.22■■□□□ 1.63
CHFR-217ENST00000540537 SHISA4Q96DD7 197 aa25.22■■□□□ 1.63
CHFR-217ENST00000540537 DYNLL2Q96FJ2 89 aa25.22■■□□□ 1.63
CHFR-217ENST00000540537 GJD2Q9UKL4 321 aa25.22■■□□□ 1.63
CHFR-217ENST00000540537 GJA8P48165 433 aa25.21■■□□□ 1.63
CHFR-217ENST00000540537 ERVK-9P63128 1117 aa25.21■■□□□ 1.63
CHFR-217ENST00000540537 ERVK-24P63145 666 aa25.21■■□□□ 1.63
CHFR-217ENST00000540537 CATSPERGQ6ZRH7 1159 aa25.21■■□□□ 1.63
CHFR-217ENST00000540537 CRBNQ96SW2 442 aa25.21■■□□□ 1.63
CHFR-217ENST00000540537 USP17L12C9JPN9 530 aa25.2■■□□□ 1.62
CHFR-217ENST00000540537 USP17L21D6R901 530 aa25.2■■□□□ 1.62
CHFR-217ENST00000540537 ZFYP08048 801 aaPredicted RBP25.2■■□□□ 1.62
CHFR-217ENST00000540537 APPBP2Q92624 585 aa25.2■■□□□ 1.62
CHFR-217ENST00000540537 YTHDC1Q96MU7 727 aaKnown RBP25.2■■□□□ 1.62
CHFR-217ENST00000540537 UNC93B1Q9H1C4 597 aa25.2■■□□□ 1.62
CHFR-217ENST00000540537 PLXNB2O15031 1838 aa25.2■■□□□ 1.62
CHFR-217ENST00000540537 ERC2O15083 957 aa25.19■■□□□ 1.62
CHFR-217ENST00000540537 RNF113AO15541 343 aaKnown RBP25.19■■□□□ 1.62
CHFR-217ENST00000540537 PEX10O60683 326 aa25.19■■□□□ 1.62
CHFR-217ENST00000540537 MAPK4P31152 587 aa25.19■■□□□ 1.62
CHFR-217ENST00000540537 C16orf86Q6ZW13 317 aa25.19■■□□□ 1.62
CHFR-217ENST00000540537 CCDC17Q96LX7 622 aa25.19■■□□□ 1.62
CHFR-217ENST00000540537 STRBPQ96SI9 672 aaKnown RBP25.19■■□□□ 1.62
CHFR-217ENST00000540537 PAGR1Q9BTK6 254 aa25.19■■□□□ 1.62
CHFR-217ENST00000540537 RABGAP1Q9Y3P9 1069 aa25.19■■□□□ 1.62
CHFR-217ENST00000540537 CYP2D7A0A087X1C5 515 aa25.18■■□□□ 1.62
CHFR-217ENST00000540537 CDK8P49336 464 aa25.18■■□□□ 1.62
CHFR-217ENST00000540537 Q3C1V9 767 aa25.18■■□□□ 1.62
CHFR-217ENST00000540537 CTR9Q6PD62 1173 aa25.18■■□□□ 1.62
CHFR-217ENST00000540537 POTEEQ6S8J3 1075 aa25.18■■□□□ 1.62
CHFR-217ENST00000540537 LBX2Q6XYB7 198 aa25.18■■□□□ 1.62
CHFR-217ENST00000540537 OSBP2Q969R2 916 aa25.18■■□□□ 1.62
CHFR-217ENST00000540537 ARPP21Q9UBL0 812 aaPredicted RBP25.18■■□□□ 1.62
CHFR-217ENST00000540537 A0A1W2PRG0 241 aa25.17■■□□□ 1.62
CHFR-217ENST00000540537 GLRX3O76003 335 aaKnown RBP25.17■■□□□ 1.62
CHFR-217ENST00000540537 HMGCRP04035 888 aa25.17■■□□□ 1.62
CHFR-217ENST00000540537 AKR1B1P15121 316 aa25.17■■□□□ 1.62
CHFR-217ENST00000540537 LRRFIP1Q32MZ4 808 aaKnown RBP25.17■■□□□ 1.62
CHFR-217ENST00000540537 GIMAP6Q6P9H5 292 aa25.17■■□□□ 1.62
CHFR-217ENST00000540537 PI4K2BQ8TCG2 481 aa25.17■■□□□ 1.62
CHFR-217ENST00000540537 U2AF1L4Q8WU68 220 aaKnown RBP25.17■■□□□ 1.62
CHFR-217ENST00000540537 SOCS4Q8WXH5 440 aa25.17■■□□□ 1.62
CHFR-217ENST00000540537 RPAP3Q9H6T3 665 aaPredicted RBP25.17■■□□□ 1.62
CHFR-217ENST00000540537 SMIM22K7EJ46 135 aa25.16■■□□□ 1.62
CHFR-217ENST00000540537 CAPN2P17655 700 aa25.16■■□□□ 1.62
CHFR-217ENST00000540537 OTUD7AQ8TE49 926 aaPredicted RBP25.16■■□□□ 1.62
CHFR-217ENST00000540537 NUDT12Q9BQG2 462 aa25.16■■□□□ 1.62
CHFR-217ENST00000540537 ARHGEF10LQ9HCE6 1279 aa25.16■■□□□ 1.62
CHFR-217ENST00000540537 GSG1L2A8MUP6 293 aa25.15■■□□□ 1.62
CHFR-217ENST00000540537 CNMDO75829 334 aa25.15■■□□□ 1.62
CHFR-217ENST00000540537 ICA1Q05084 483 aa25.15■■□□□ 1.62
CHFR-217ENST00000540537 SBK1Q52WX2 424 aa25.15■■□□□ 1.62
CHFR-217ENST00000540537 CCAR1Q8IX12 1150 aaKnown RBP25.15■■□□□ 1.62
CHFR-217ENST00000540537 PORCNQ9H237 461 aa25.15■■□□□ 1.62
CHFR-217ENST00000540537 PAK6Q9NQU5 681 aaPredicted RBP25.15■■□□□ 1.62
CHFR-217ENST00000540537 SPDYE16A6NNV3 312 aaPredicted RBP25.14■■□□□ 1.62
CHFR-217ENST00000540537 SGPL1O95470 568 aa25.14■■□□□ 1.62
CHFR-217ENST00000540537 GNAT2P19087 354 aa25.14■■□□□ 1.62
CHFR-217ENST00000540537 MX1P20591 662 aa25.14■■□□□ 1.62
CHFR-217ENST00000540537 CCNA1P78396 465 aa25.14■■□□□ 1.62
CHFR-217ENST00000540537 HDAC1Q13547 482 aaPredicted RBP25.14■■□□□ 1.62
CHFR-217ENST00000540537 GPR142Q7Z601 462 aa25.14■■□□□ 1.62
CHFR-217ENST00000540537 SH2D4AQ9H788 454 aa25.14■■□□□ 1.62
CHFR-217ENST00000540537 ZBTB47Q9UFB7 747 aaPredicted RBP25.14■■□□□ 1.62
CHFR-217ENST00000540537 GPAA1O43292 621 aa25.13■■□□□ 1.61
CHFR-217ENST00000540537 XRCC5P13010 732 aaKnown RBP25.13■■□□□ 1.61
CHFR-217ENST00000540537 AAMPQ13685 434 aa25.13■■□□□ 1.61
CHFR-217ENST00000540537 PLEKHH3Q7Z736 793 aa25.13■■□□□ 1.61
CHFR-217ENST00000540537 UBE2Q1Q7Z7E8 422 aa25.13■■□□□ 1.61
CHFR-217ENST00000540537 SIAH1Q8IUQ4 282 aa25.13■■□□□ 1.61
CHFR-217ENST00000540537 LPAR1Q92633 364 aa25.13■■□□□ 1.61
CHFR-217ENST00000540537 GCC1Q96CN9 775 aa25.13■■□□□ 1.61
CHFR-217ENST00000540537 TMX2Q9Y320 296 aa25.13■■□□□ 1.61
CHFR-217ENST00000540537 SALL3Q9BXA9 1300 aa25.12■■□□□ 1.61
CHFR-217ENST00000540537 CYP2B6P20813 491 aa25.12■■□□□ 1.61
CHFR-217ENST00000540537 MORN1Q5T089 497 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms