RNA–Protein interactions for RNA: ENST00000540503.1

PPFIBP1-212, Transcript of PPFIA binding protein 1, humanhuman

TSL 4

Gene PPFIBP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-212ENST00000540503 TTC14Q96N46 770 aa12.11□□□□□ -0.47
PPFIBP1-212ENST00000540503 STX8Q9UNK0 236 aa12.11□□□□□ -0.47
PPFIBP1-212ENST00000540503 TMEM88BA6NKF7 163 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 SH2B2O14492 632 aaPredicted RBP12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 LIFRP42702 1097 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 NEK4P51957 841 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 EXOSC10Q01780 885 aaKnown RBP12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 ATP2B2Q01814 1243 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 FMR1Q06787 632 aaKnown RBP eCLIP12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 RRP1BQ14684 758 aaKnown RBP12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 SEPT2Q15019 361 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 LDLRAD1Q5T700 205 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 NFXL1Q6ZNB6 911 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 Q6ZUG5 572 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 ENAHQ8N8S7 591 aaPredicted RBP12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 ZKSCAN4Q969J2 545 aaPredicted RBP12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 KIF2CQ99661 725 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 FEZ1Q99689 392 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 ZKSCAN3Q9BRR0 538 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 KAT14Q9H8E8 782 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 MTMR4Q9NYA4 1195 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 SYNPO2Q9UMS6 1093 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 FZD1Q9UP38 647 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 SNCAIPQ9Y6H5 919 aa12.1□□□□□ -0.47
PPFIBP1-212ENST00000540503 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 SPDYE5A6NIY4 337 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 TOP1P11387 765 aaKnown RBP12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 CPA1P15085 419 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 PTPRAP18433 802 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 GUCY1A2P33402 732 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 MCM2P49736 904 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 HUNKP57058 714 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 PPATQ06203 517 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 SYNE3Q6ZMZ3 975 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 CHST3Q7LGC8 479 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 ERO1BQ86YB8 467 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 TCEANC2Q96MN5 208 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 LRRC2Q9BYS8 371 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 ALDH8A1Q9H2A2 487 aaPredicted RBP12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 ELP3Q9H9T3 547 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 PTPRFP10586 1907 aa12.09□□□□□ -0.47
PPFIBP1-212ENST00000540503 NMT2O60551 498 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 EEF2P13639 858 aaKnown RBP12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 NOVP48745 357 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 USP14P54578 494 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 PPIL2Q13356 520 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 SEC23AQ15436 765 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 CST9Q5W186 159 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 MOB2Q70IA6 237 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 CATIPQ7Z7H3 387 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 SGMS1Q86VZ5 419 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 ANKS1AQ92625 1134 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 SLC10A4Q96EP9 437 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 WDR18Q9BV38 432 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 LY9Q9HBG7 655 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 GOPCQ9HD26 462 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 IL17RBQ9NRM6 502 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 ABT1Q9ULW3 272 aaKnown RBP12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 TLL2Q9Y6L7 1015 aa12.08□□□□□ -0.48
PPFIBP1-212ENST00000540503 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 DDAH1O94760 285 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 CALM1P0DP23 149 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 CALM2P0DP24 149 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 CALM3P0DP25 149 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 APLP1P51693 650 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 RCAN1P53805 252 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 SHROOM1Q2M3G4 852 aaPredicted RBP12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 CLEC10AQ8IUN9 316 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 ZNF280CQ8ND82 737 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 PNMA1Q8ND90 353 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 IGDCC4Q8TDY8 1250 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 BRF1Q92994 677 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 OPTNQ96CV9 577 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 OTUD5Q96G74 571 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 CLMNQ96JQ2 1002 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 TMEM47Q9BQJ4 181 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 AGXT2Q9BYV1 514 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 CLIP2Q9UDT6 1046 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 SLC12A7Q9Y666 1083 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 ZHX2Q9Y6X8 837 aa12.07□□□□□ -0.48
PPFIBP1-212ENST00000540503 KLF18A0A0U1RQI7 1052 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 C19orf81C9J6K1 198 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 USP17L10C9JJH3 530 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 ZBTB48P10074 688 aaPredicted RBP12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 AK2P54819 239 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 JAG1P78504 1218 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 RCSD1Q6JBY9 416 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 RGMBQ6NW40 437 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 USP17L2Q6R6M4 530 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 SAPCD2Q86UD0 394 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 HSCBQ8IWL3 235 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 LRRC47Q8N1G4 583 aaKnown RBP12.06□□□□□ -0.48
PPFIBP1-212ENST00000540503 GMCL1P1Q8NEA9 526 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms