RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 A0A1W2PRG0 241 aa20.21■□□□□ 0.83
DDB1-215ENST00000539712 USP17L12C9JPN9 530 aa20.21■□□□□ 0.83
DDB1-215ENST00000539712 USP17L21D6R901 530 aa20.21■□□□□ 0.83
DDB1-215ENST00000539712 OSBP2Q969R2 916 aa20.21■□□□□ 0.83
DDB1-215ENST00000539712 TAOK2Q9UL54 1235 aa20.21■□□□□ 0.83
DDB1-215ENST00000539712 SLC4A4Q9Y6R1 1079 aa20.21■□□□□ 0.83
DDB1-215ENST00000539712 SALL3Q9BXA9 1300 aa20.21■□□□□ 0.83
DDB1-215ENST00000539712 ADCY3O60266 1144 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 ELNP15502 786 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 ZYXQ15942 572 aaKnown RBP20.2■□□□□ 0.82
DDB1-215ENST00000539712 Q3C1V9 767 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 CTR9Q6PD62 1173 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 SLAIN1Q8ND83 568 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 PXYLP1Q8TE99 480 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 SHISA4Q96DD7 197 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 GPATCH3Q96I76 525 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 CABP5Q9NP86 173 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 SWAP70Q9UH65 585 aa20.2■□□□□ 0.82
DDB1-215ENST00000539712 RNF113AO15541 343 aaKnown RBP20.19■□□□□ 0.82
DDB1-215ENST00000539712 CCL5P13501 91 aa20.19■□□□□ 0.82
DDB1-215ENST00000539712 VCAM1P19320 739 aa20.19■□□□□ 0.82
DDB1-215ENST00000539712 CATSPERGQ6ZRH7 1159 aa20.19■□□□□ 0.82
DDB1-215ENST00000539712 COA7Q96BR5 231 aa20.19■□□□□ 0.82
DDB1-215ENST00000539712 FEZ1Q99689 392 aa20.19■□□□□ 0.82
DDB1-215ENST00000539712 TTC41PQ6P2S7 1318 aa20.19■□□□□ 0.82
DDB1-215ENST00000539712 GSG1L2A8MUP6 293 aa20.18■□□□□ 0.82
DDB1-215ENST00000539712 CNMDO75829 334 aa20.18■□□□□ 0.82
DDB1-215ENST00000539712 AKR1B1P15121 316 aa20.18■□□□□ 0.82
DDB1-215ENST00000539712 CDK8P49336 464 aa20.18■□□□□ 0.82
DDB1-215ENST00000539712 USP14P54578 494 aa20.18■□□□□ 0.82
DDB1-215ENST00000539712 HDAC1Q13547 482 aaPredicted RBP20.18■□□□□ 0.82
DDB1-215ENST00000539712 KIAA1755Q5JYT7 1200 aa20.18■□□□□ 0.82
DDB1-215ENST00000539712 GPRC5AQ8NFJ5 357 aa20.18■□□□□ 0.82
DDB1-215ENST00000539712 USP17L15C9J2P7 530 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 USP17L13C9JLJ4 530 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 USP17L11C9JVI0 530 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 USP17L18D6R9N7 530 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 USP17L22D6RA61 530 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 USP17L17D6RBQ6 530 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 USP17L19D6RCP7 530 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 USP17L20D6RJB6 530 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 MPHOSPH10O00566 681 aaKnown RBP20.17■□□□□ 0.82
DDB1-215ENST00000539712 GJB1P08034 283 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 USP17L24Q0WX57 530 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 PRPF38BQ5VTL8 546 aaKnown RBP20.17■□□□□ 0.82
DDB1-215ENST00000539712 C16orf86Q6ZW13 317 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 CLEC10AQ8IUN9 316 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 APPBP2Q92624 585 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 UNC93B1Q9H1C4 597 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 PLXNB2O15031 1838 aa20.17■□□□□ 0.82
DDB1-215ENST00000539712 M0R2C6 588 aa20.16■□□□□ 0.82
DDB1-215ENST00000539712 INHAP05111 366 aa20.16■□□□□ 0.82
DDB1-215ENST00000539712 ERVK-9P63128 1117 aa20.16■□□□□ 0.82
DDB1-215ENST00000539712 ERVK-24P63145 666 aa20.16■□□□□ 0.82
DDB1-215ENST00000539712 TMEM179Q6ZVK1 233 aa20.16■□□□□ 0.82
DDB1-215ENST00000539712 PORCNQ9H237 461 aa20.16■□□□□ 0.82
DDB1-215ENST00000539712 BIN2Q9UBW5 565 aaPredicted RBP20.16■□□□□ 0.82
DDB1-215ENST00000539712 GLRX3O76003 335 aaKnown RBP20.15■□□□□ 0.82
DDB1-215ENST00000539712 ZFYP08048 801 aaPredicted RBP20.15■□□□□ 0.82
DDB1-215ENST00000539712 MX1P20591 662 aa20.15■□□□□ 0.82
DDB1-215ENST00000539712 GJA8P48165 433 aa20.15■□□□□ 0.82
DDB1-215ENST00000539712 SBK1Q52WX2 424 aa20.15■□□□□ 0.82
DDB1-215ENST00000539712 LBX2Q6XYB7 198 aa20.15■□□□□ 0.82
DDB1-215ENST00000539712 UBE2Q1Q7Z7E8 422 aa20.15■□□□□ 0.82
DDB1-215ENST00000539712 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.15■□□□□ 0.82
DDB1-215ENST00000539712 RNF208Q9H0X6 261 aa20.15■□□□□ 0.82
DDB1-215ENST00000539712 EPB41L4AQ9HCS5 686 aaPredicted RBP20.15■□□□□ 0.82
DDB1-215ENST00000539712 GPAA1O43292 621 aa20.14■□□□□ 0.81
DDB1-215ENST00000539712 UBXN2AP68543 259 aa20.14■□□□□ 0.81
DDB1-215ENST00000539712 ANKRD45Q5TZF3 282 aa20.14■□□□□ 0.81
DDB1-215ENST00000539712 GIMAP6Q6P9H5 292 aa20.14■□□□□ 0.81
DDB1-215ENST00000539712 GTF3C2Q8WUA4 911 aaPredicted RBP20.14■□□□□ 0.81
DDB1-215ENST00000539712 USP6NLQ92738 828 aa20.14■□□□□ 0.81
DDB1-215ENST00000539712 CCDC17Q96LX7 622 aa20.14■□□□□ 0.81
DDB1-215ENST00000539712 SEC62Q99442 399 aaKnown RBP20.14■□□□□ 0.81
DDB1-215ENST00000539712 PAGR1Q9BTK6 254 aa20.14■□□□□ 0.81
DDB1-215ENST00000539712 RPAP3Q9H6T3 665 aaPredicted RBP20.14■□□□□ 0.81
DDB1-215ENST00000539712 RABGAP1Q9Y3P9 1069 aa20.14■□□□□ 0.81
DDB1-215ENST00000539712 CEP290O15078 2479 aa20.13■□□□□ 0.81
DDB1-215ENST00000539712 ERC2O15083 957 aa20.13■□□□□ 0.81
DDB1-215ENST00000539712 PAK6Q9NQU5 681 aaPredicted RBP20.13■□□□□ 0.81
DDB1-215ENST00000539712 BTBD7Q9P203 1132 aa20.13■□□□□ 0.81
DDB1-215ENST00000539712 STAP2Q9UGK3 403 aa20.13■□□□□ 0.81
DDB1-215ENST00000539712 TMX2Q9Y320 296 aa20.13■□□□□ 0.81
DDB1-215ENST00000539712 RLFQ13129 1914 aa20.13■□□□□ 0.81
DDB1-215ENST00000539712 SPDYE16A6NNV3 312 aaPredicted RBP20.12■□□□□ 0.81
DDB1-215ENST00000539712 MAPK4P31152 587 aa20.12■□□□□ 0.81
DDB1-215ENST00000539712 TRIM32Q13049 653 aa20.12■□□□□ 0.81
DDB1-215ENST00000539712 MORN1Q5T089 497 aa20.12■□□□□ 0.81
DDB1-215ENST00000539712 U2AF1L4Q8WU68 220 aaKnown RBP20.12■□□□□ 0.81
DDB1-215ENST00000539712 GCC1Q96CN9 775 aa20.12■□□□□ 0.81
DDB1-215ENST00000539712 DDRGK1Q96HY6 314 aa20.12■□□□□ 0.81
DDB1-215ENST00000539712 ARPP21Q9UBL0 812 aaPredicted RBP20.12■□□□□ 0.81
DDB1-215ENST00000539712 MYH8P13535 1937 aa20.12■□□□□ 0.81
DDB1-215ENST00000539712 SGPL1O95470 568 aa20.11■□□□□ 0.81
DDB1-215ENST00000539712 ICA1Q05084 483 aa20.11■□□□□ 0.81
DDB1-215ENST00000539712 ZMYM1Q5SVZ6 1142 aa20.11■□□□□ 0.81
DDB1-215ENST00000539712 GPR142Q7Z601 462 aa20.11■□□□□ 0.81
DDB1-215ENST00000539712 AMOTL1Q8IY63 956 aa20.11■□□□□ 0.81
DDB1-215ENST00000539712 NKX2-3Q8TAU0 364 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms