RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 BNC2Q6ZN30 1099 aaPredicted RBP9.71□□□□□ -0.86
CCDC7-209ENST00000539197 MCATQ8IVS2 390 aaKnown RBP9.71□□□□□ -0.86
CCDC7-209ENST00000539197 KRTAP4-7Q9BYR0 210 aa9.71□□□□□ -0.86
CCDC7-209ENST00000539197 RLBP1P12271 317 aa9.7□□□□□ -0.86
CCDC7-209ENST00000539197 RAC2P15153 192 aa9.7□□□□□ -0.86
CCDC7-209ENST00000539197 RPL6Q02878 288 aaKnown RBP9.7□□□□□ -0.86
CCDC7-209ENST00000539197 SYDE1Q6ZW31 735 aaPredicted RBP9.7□□□□□ -0.86
CCDC7-209ENST00000539197 SND1Q7KZF4 910 aaKnown RBP eCLIP9.7□□□□□ -0.86
CCDC7-209ENST00000539197 TMPRSS7Q7RTY8 843 aa9.7□□□□□ -0.86
CCDC7-209ENST00000539197 PHC3Q8NDX5 983 aa9.7□□□□□ -0.86
CCDC7-209ENST00000539197 PPP1R13LQ8WUF5 828 aa9.7□□□□□ -0.86
CCDC7-209ENST00000539197 TOX2Q96NM4 488 aa9.7□□□□□ -0.86
CCDC7-209ENST00000539197 TSPAN15O95858 294 aa9.69□□□□□ -0.86
CCDC7-209ENST00000539197 DAB2P98082 770 aa9.69□□□□□ -0.86
CCDC7-209ENST00000539197 TAGLNQ01995 201 aaKnown RBP9.69□□□□□ -0.86
CCDC7-209ENST00000539197 KRTAP19-4Q3LI73 84 aa9.69□□□□□ -0.86
CCDC7-209ENST00000539197 DIEXFQ68CQ4 756 aaKnown RBP9.69□□□□□ -0.86
CCDC7-209ENST00000539197 TTC6Q86TZ1 520 aa9.69□□□□□ -0.86
CCDC7-209ENST00000539197 DIRC2Q96SL1 478 aa9.69□□□□□ -0.86
CCDC7-209ENST00000539197 DUSP15Q9H1R2 295 aaPredicted RBP9.69□□□□□ -0.86
CCDC7-209ENST00000539197 PSMD2Q13200 908 aa9.68□□□□□ -0.86
CCDC7-209ENST00000539197 TAF1CQ15572 869 aaPredicted RBP9.68□□□□□ -0.86
CCDC7-209ENST00000539197 CREG2Q8IUH2 290 aa9.68□□□□□ -0.86
CCDC7-209ENST00000539197 AEBP1Q8IUX7 1158 aa9.68□□□□□ -0.86
CCDC7-209ENST00000539197 ADAMTS10Q9H324 1103 aa9.68□□□□□ -0.86
CCDC7-209ENST00000539197 ADAM30Q9UKF2 790 aa9.68□□□□□ -0.86
CCDC7-209ENST00000539197 LRRN2O75325 713 aa9.67□□□□□ -0.86
CCDC7-209ENST00000539197 HK2P52789 917 aa9.67□□□□□ -0.86
CCDC7-209ENST00000539197 ABHD4Q8TB40 342 aa9.67□□□□□ -0.86
CCDC7-209ENST00000539197 CEP131Q9UPN4 1083 aa9.67□□□□□ -0.86
CCDC7-209ENST00000539197 KRT1P04264 644 aa9.66□□□□□ -0.86
CCDC7-209ENST00000539197 PLCG1P19174 1290 aa9.66□□□□□ -0.86
CCDC7-209ENST00000539197 DNAJC14Q6Y2X3 702 aaPredicted RBP9.66□□□□□ -0.86
CCDC7-209ENST00000539197 ANKLE2Q86XL3 938 aa9.66□□□□□ -0.86
CCDC7-209ENST00000539197 FBXO15Q8NCQ5 510 aaPredicted RBP9.66□□□□□ -0.86
CCDC7-209ENST00000539197 NOC4LQ9BVI4 516 aaKnown RBP9.66□□□□□ -0.86
CCDC7-209ENST00000539197 TRIT1Q9H3H1 467 aaKnown RBP9.66□□□□□ -0.86
CCDC7-209ENST00000539197 NSUN3Q9H649 340 aaKnown RBP9.66□□□□□ -0.86
CCDC7-209ENST00000539197 TMEM59LQ9UK28 342 aa9.66□□□□□ -0.86
CCDC7-209ENST00000539197 TPP2P29144 1249 aaPredicted RBP9.65□□□□□ -0.86
CCDC7-209ENST00000539197 TRHRP34981 398 aaPredicted RBP9.65□□□□□ -0.86
CCDC7-209ENST00000539197 FAM13CQ8NE31 585 aa9.65□□□□□ -0.86
CCDC7-209ENST00000539197 ZSCAN18Q8TBC5 510 aaPredicted RBP9.65□□□□□ -0.86
CCDC7-209ENST00000539197 USP31Q70CQ4 1352 aa9.64□□□□□ -0.87
CCDC7-209ENST00000539197 FAM221AA4D161 298 aa9.64□□□□□ -0.87
CCDC7-209ENST00000539197 CILPO75339 1184 aa9.64□□□□□ -0.87
CCDC7-209ENST00000539197 F13A1P00488 732 aa9.64□□□□□ -0.87
CCDC7-209ENST00000539197 PF4P02776 101 aa9.64□□□□□ -0.87
CCDC7-209ENST00000539197 C1QTNF9P0C862 333 aa9.64□□□□□ -0.87
CCDC7-209ENST00000539197 CFPP27918 469 aa9.64□□□□□ -0.87
CCDC7-209ENST00000539197 ST13P50502 369 aaKnown RBP9.64□□□□□ -0.87
CCDC7-209ENST00000539197 GAB4Q2WGN9 574 aa9.64□□□□□ -0.87
CCDC7-209ENST00000539197 NFIBO00712 420 aa9.63□□□□□ -0.87
CCDC7-209ENST00000539197 CAMK2GQ13555 558 aaPredicted RBP9.63□□□□□ -0.87
CCDC7-209ENST00000539197 TMC4Q7Z404 712 aa9.63□□□□□ -0.87
CCDC7-209ENST00000539197 CCDC84Q86UT8 332 aaPredicted RBP9.63□□□□□ -0.87
CCDC7-209ENST00000539197 DTWD2Q8NBA8 298 aa9.63□□□□□ -0.87
CCDC7-209ENST00000539197 CYB5D2Q8WUJ1 264 aa9.63□□□□□ -0.87
CCDC7-209ENST00000539197 MYLIPQ8WY64 445 aa9.63□□□□□ -0.87
CCDC7-209ENST00000539197 GPATCH2Q9NW75 528 aa9.63□□□□□ -0.87
CCDC7-209ENST00000539197 GRIN3BO60391 1043 aa9.62□□□□□ -0.87
CCDC7-209ENST00000539197 SRFP11831 508 aa9.62□□□□□ -0.87
CCDC7-209ENST00000539197 XPCQ01831 940 aaPredicted RBP9.62□□□□□ -0.87
CCDC7-209ENST00000539197 FBXO33Q7Z6M2 555 aa9.62□□□□□ -0.87
CCDC7-209ENST00000539197 C1QL4Q86Z23 238 aa9.62□□□□□ -0.87
CCDC7-209ENST00000539197 LRRC56Q8IYG6 542 aaPredicted RBP9.62□□□□□ -0.87
CCDC7-209ENST00000539197 EPB41L4BQ9H329 900 aa9.62□□□□□ -0.87
CCDC7-209ENST00000539197 SP110Q9HB58 689 aa9.62□□□□□ -0.87
CCDC7-209ENST00000539197 DCP1AQ9NPI6 582 aaPredicted RBP9.62□□□□□ -0.87
CCDC7-209ENST00000539197 KCNH3Q9ULD8 1083 aa9.62□□□□□ -0.87
CCDC7-209ENST00000539197 DNAJA2O60884 412 aa9.61□□□□□ -0.87
CCDC7-209ENST00000539197 BPNT1O95861 308 aa9.61□□□□□ -0.87
CCDC7-209ENST00000539197 YARSP54577 528 aaKnown RBP9.61□□□□□ -0.87
CCDC7-209ENST00000539197 FAM160A1Q05DH4 1040 aa9.61□□□□□ -0.87
CCDC7-209ENST00000539197 C19orf44Q9H6X5 657 aa9.61□□□□□ -0.87
CCDC7-209ENST00000539197 POLR3KQ9Y2Y1 108 aaPredicted RBP9.61□□□□□ -0.87
CCDC7-209ENST00000539197 CHURC1-FNTBB4DL54 471 aa9.6□□□□□ -0.87
CCDC7-209ENST00000539197 HPXP02790 462 aa9.6□□□□□ -0.87
CCDC7-209ENST00000539197 LCNL1Q6ZST4 164 aa9.6□□□□□ -0.87
CCDC7-209ENST00000539197 GATAD2BQ8WXI9 593 aa9.6□□□□□ -0.87
CCDC7-209ENST00000539197 RHOVQ96L33 236 aa9.6□□□□□ -0.87
CCDC7-209ENST00000539197 GPR62Q9BZJ7 368 aa9.6□□□□□ -0.87
CCDC7-209ENST00000539197 DUSP13Q9UII6 198 aa9.6□□□□□ -0.87
CCDC7-209ENST00000539197 TMEM253P0C7T8 217 aa9.59□□□□□ -0.87
CCDC7-209ENST00000539197 LMNB2Q03252 620 aa9.59□□□□□ -0.87
CCDC7-209ENST00000539197 EGR3Q06889 387 aa9.59□□□□□ -0.87
CCDC7-209ENST00000539197 TMEM201Q5SNT2 666 aa9.59□□□□□ -0.87
CCDC7-209ENST00000539197 FBXO27Q8NI29 283 aa9.59□□□□□ -0.87
CCDC7-209ENST00000539197 BAHD1Q8TBE0 780 aaPredicted RBP9.59□□□□□ -0.87
CCDC7-209ENST00000539197 REV1Q9UBZ9 1251 aa9.59□□□□□ -0.87
CCDC7-209ENST00000539197 KLHL3Q9UH77 587 aa9.59□□□□□ -0.87
CCDC7-209ENST00000539197 TIGD5Q53EQ6 642 aa9.58□□□□□ -0.88
CCDC7-209ENST00000539197 TSPYL5Q86VY4 417 aaPredicted RBP9.58□□□□□ -0.88
CCDC7-209ENST00000539197 RNF32Q9H0A6 362 aa9.58□□□□□ -0.88
CCDC7-209ENST00000539197 PCDHA11Q9Y5I1 949 aa9.58□□□□□ -0.88
CCDC7-209ENST00000539197 SHISA3A0PJX4 238 aa9.57□□□□□ -0.88
CCDC7-209ENST00000539197 MINDY4BA8MYZ0 360 aa9.57□□□□□ -0.88
CCDC7-209ENST00000539197 GBP2P32456 591 aaPredicted RBP9.57□□□□□ -0.88
CCDC7-209ENST00000539197 RNF141Q8WVD5 230 aa9.57□□□□□ -0.88
CCDC7-209ENST00000539197 TMEM74Q96NL1 305 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms