RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 FBXO33Q7Z6M2 555 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 WASF1Q92558 559 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 IFIT3O14879 490 aaKnown RBP7.95□□□□□ -1.14
PROM1-219ENST00000539194 POLR2DO15514 142 aaKnown RBP7.95□□□□□ -1.14
PROM1-219ENST00000539194 ORC4O43929 436 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 RTN1Q16799 776 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 SPECC1Q5M775 1068 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 SPECC1LQ69YQ0 1117 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 ISM2Q6H9L7 571 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 GRAMD1CQ8IYS0 662 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 ANKS1AQ92625 1134 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 NAPBQ9H115 298 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 CCDC87Q9NVE4 849 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 TNKSO95271 1327 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 SIPA1L1O43166 1804 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.95□□□□□ -1.14
PROM1-219ENST00000539194 CBFA2T2O43439 604 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 SMC2O95347 1197 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 CTR9Q6PD62 1173 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 LRRC15Q8TF66 581 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 PAGE5Q96GU1 130 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 SAMSN1Q9NSI8 373 aaKnown RBP7.95□□□□□ -1.14
PROM1-219ENST00000539194 DNAI1Q9UI46 699 aa7.95□□□□□ -1.14
PROM1-219ENST00000539194 THRAP3Q9Y2W1 955 aaKnown RBP7.95□□□□□ -1.14
PROM1-219ENST00000539194 MYH7BA7E2Y1 1941 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 SASH3O75995 380 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 NOVP48745 357 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 CMTR1Q8N1G2 835 aaKnown RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 MARCH10Q8NA82 808 aaPredicted RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 CNNM3Q8NE01 707 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 UTP14AQ9BVJ6 771 aaKnown RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 BCL11BQ9C0K0 894 aaPredicted RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 MRPL44Q9H9J2 332 aaKnown RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 BSDC1Q9NW68 430 aaPredicted RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 A0A0U1RQJ8 604 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 EFCAB8A8MWE9 144 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 RNF225M0QZC1 329 aaPredicted RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 VEGFAP15692 232 aaPredicted RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 WTAPQ15007 396 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 PTPN21Q16825 1174 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 TAF7LQ5H9L4 462 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 TMTC3Q6ZXV5 915 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 RASGRP2Q7LDG7 609 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 MSL3Q8N5Y2 521 aaKnown RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 ATRIPQ8WXE1 791 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 SYTL4Q96C24 671 aaPredicted RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 FAM84BQ96KN1 310 aaPredicted RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 ZSCAN10Q96SZ4 725 aaPredicted RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 NFE2L3Q9Y4A8 694 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 SLC4A4Q9Y6R1 1079 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 TM4SF1P30408 202 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 CLEC4GQ6UXB4 293 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 IRF2BP1Q8IU81 584 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 NSUN4Q96CB9 384 aaKnown RBP7.94□□□□□ -1.14
PROM1-219ENST00000539194 EPSTI1Q96J88 318 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 MPHOSPH8Q99549 860 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 ZKSCAN3Q9BRR0 538 aa7.94□□□□□ -1.14
PROM1-219ENST00000539194 TEX33O43247 280 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 PLEKHA8P1O95397 391 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 TBC1D8O95759 1140 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 SBK1Q52WX2 424 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 RAD9BQ6WBX8 426 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 SRBD1Q8N5C6 995 aaKnown RBP7.93□□□□□ -1.14
PROM1-219ENST00000539194 FBXW7Q969H0 707 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 GSDMAQ96QA5 445 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 SRRTQ9BXP5 876 aaKnown RBP7.93□□□□□ -1.14
PROM1-219ENST00000539194 LIMA1Q9UHB6 759 aaKnown RBP7.93□□□□□ -1.14
PROM1-219ENST00000539194 NAP1L2Q9ULW6 460 aaPredicted RBP7.93□□□□□ -1.14
PROM1-219ENST00000539194 NRXN2Q9P2S2 1712 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 DDAH1O94760 285 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 GYPCP04921 128 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 PNMA6AP0CW24 399 aaPredicted RBP7.93□□□□□ -1.14
PROM1-219ENST00000539194 UBE4AQ14139 1066 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 NAALADL2Q58DX5 795 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 SDR42E1Q8WUS8 393 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.93□□□□□ -1.14
PROM1-219ENST00000539194 V9GYY5 206 aaPredicted RBP7.93□□□□□ -1.14
PROM1-219ENST00000539194 C10orf71Q711Q0 1435 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 RBBP6Q7Z6E9 1792 aaKnown RBP7.93□□□□□ -1.14
PROM1-219ENST00000539194 ATP8B1O43520 1251 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 ZNF827Q17R98 1081 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 CCDC152Q4G0S7 254 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 SPATA1Q5VX52 437 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 KANK3Q6NY19 840 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
PROM1-219ENST00000539194 ST7Q9NRC1 585 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 ADGRG1Q9Y653 693 aa7.93□□□□□ -1.14
PROM1-219ENST00000539194 MAP2K7O14733 419 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 CCP110O43303 1012 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 ARHGAP25P42331 645 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 USP5P45974 858 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 MTF1Q14872 753 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 KRT222Q8N1A0 295 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 FERMT2Q96AC1 680 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 BAG1Q99933 345 aaPredicted RBP7.92□□□□□ -1.14
PROM1-219ENST00000539194 RNF41Q9H4P4 317 aaPredicted RBP7.92□□□□□ -1.14
PROM1-219ENST00000539194 RAI14Q9P0K7 980 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 MINPP1Q9UNW1 487 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 SNED1Q8TER0 1413 aa7.92□□□□□ -1.14
PROM1-219ENST00000539194 SPATA31A5Q5VU36 1347 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms