RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 SULF1Q8IWU6 871 aa18.01■□□□□ 0.47
VAMP1-207ENST00000539047 DEFB129Q9H1M3 183 aa18.01■□□□□ 0.47
VAMP1-207ENST00000539047 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
VAMP1-207ENST00000539047 CIZ1Q9ULV3 898 aaPredicted RBP18.01■□□□□ 0.47
VAMP1-207ENST00000539047 MYH6P13533 1939 aa18■□□□□ 0.47
VAMP1-207ENST00000539047 KIF3CO14782 793 aa18■□□□□ 0.47
VAMP1-207ENST00000539047 AKR1B1P15121 316 aa18■□□□□ 0.47
VAMP1-207ENST00000539047 CCT2P78371 535 aaKnown RBP18■□□□□ 0.47
VAMP1-207ENST00000539047 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
VAMP1-207ENST00000539047 RTN1Q16799 776 aa18■□□□□ 0.47
VAMP1-207ENST00000539047 TATDN1Q6P1N9 297 aa18■□□□□ 0.47
VAMP1-207ENST00000539047 PNMA8AQ86V59 439 aaPredicted RBP18■□□□□ 0.47
VAMP1-207ENST00000539047 CTCFLQ8NI51 663 aaPredicted RBP18■□□□□ 0.47
VAMP1-207ENST00000539047 NUP133Q8WUM0 1156 aa18■□□□□ 0.47
VAMP1-207ENST00000539047 RBM28Q9NW13 759 aaKnown RBP18■□□□□ 0.47
VAMP1-207ENST00000539047 DOCK1Q14185 1865 aa18■□□□□ 0.47
VAMP1-207ENST00000539047 NID2Q14112 1375 aa18■□□□□ 0.47
VAMP1-207ENST00000539047 POLR2AP24928 1970 aaKnown RBP17.99■□□□□ 0.47
VAMP1-207ENST00000539047 FAM196BA6NMK8 535 aa17.99■□□□□ 0.47
VAMP1-207ENST00000539047 NMT2O60551 498 aa17.99■□□□□ 0.47
VAMP1-207ENST00000539047 TOP1P11387 765 aaKnown RBP17.99■□□□□ 0.47
VAMP1-207ENST00000539047 KIF5BP33176 963 aa17.99■□□□□ 0.47
VAMP1-207ENST00000539047 SCRN1Q12765 414 aa17.99■□□□□ 0.47
VAMP1-207ENST00000539047 SUPT20HL1Q3ZLR7 823 aa17.99■□□□□ 0.47
VAMP1-207ENST00000539047 ZC3H15Q8WU90 426 aaKnown RBP17.99■□□□□ 0.47
VAMP1-207ENST00000539047 ANKS1AQ92625 1134 aa17.99■□□□□ 0.47
VAMP1-207ENST00000539047 DNAJC18Q9H819 358 aa17.99■□□□□ 0.47
VAMP1-207ENST00000539047 CHMP5Q9NZZ3 219 aa17.99■□□□□ 0.47
VAMP1-207ENST00000539047 ASTN2O75129 1339 aaPredicted RBP17.98■□□□□ 0.47
VAMP1-207ENST00000539047 TTLL1O95922 423 aa17.98■□□□□ 0.47
VAMP1-207ENST00000539047 PDIA4P13667 645 aaKnown RBP17.98■□□□□ 0.47
VAMP1-207ENST00000539047 PDCP20941 246 aa17.98■□□□□ 0.47
VAMP1-207ENST00000539047 FAM184AQ8NB25 1140 aa17.98■□□□□ 0.47
VAMP1-207ENST00000539047 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
VAMP1-207ENST00000539047 NKX2-3Q8TAU0 364 aa17.98■□□□□ 0.47
VAMP1-207ENST00000539047 CEP95Q96GE4 821 aa17.98■□□□□ 0.47
VAMP1-207ENST00000539047 KANSL2Q9H9L4 492 aa17.98■□□□□ 0.47
VAMP1-207ENST00000539047 NF2P35240 595 aa17.97■□□□□ 0.47
VAMP1-207ENST00000539047 EAPPQ56P03 285 aaPredicted RBP17.97■□□□□ 0.47
VAMP1-207ENST00000539047 MYL10Q9BUA6 226 aa17.97■□□□□ 0.47
VAMP1-207ENST00000539047 ZNF341Q9BYN7 854 aa17.97■□□□□ 0.47
VAMP1-207ENST00000539047 NMRK2Q9NPI5 230 aa17.97■□□□□ 0.47
VAMP1-207ENST00000539047 IL17RBQ9NRM6 502 aa17.97■□□□□ 0.47
VAMP1-207ENST00000539047 GINM1Q9NU53 330 aa17.97■□□□□ 0.47
VAMP1-207ENST00000539047 MTMR4Q9NYA4 1195 aa17.97■□□□□ 0.47
VAMP1-207ENST00000539047 GDF11O95390 407 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 GJB2P29033 226 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 HIRAP54198 1017 aaPredicted RBP17.96■□□□□ 0.47
VAMP1-207ENST00000539047 NUCB2P80303 420 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 ATP2B2Q01814 1243 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 ICA1Q05084 483 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 RAB11FIP4Q86YS3 637 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 CCDC144CPQ8IYA2 1237 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 TRIM22Q8IYM9 498 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 TEPSINQ96N21 525 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 MAP3K14Q99558 947 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 TAF1DQ9H5J8 278 aaPredicted RBP17.96■□□□□ 0.47
VAMP1-207ENST00000539047 SH2D4AQ9H788 454 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 SENP2Q9HC62 589 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 NCOA5Q9HCD5 579 aaKnown RBP17.96■□□□□ 0.47
VAMP1-207ENST00000539047 ARHGEF10LQ9HCE6 1279 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 HPS5Q9UPZ3 1129 aa17.96■□□□□ 0.47
VAMP1-207ENST00000539047 IGKV6D-41A0A0C4DH26 115 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 PTPDC1A2A3K4 754 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 ASNSP08243 561 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 RXRAP19793 462 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 GNAQP50148 359 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 AKAP17AQ02040 695 aaKnown RBP17.95■□□□□ 0.46
VAMP1-207ENST00000539047 RAB3GAP1Q15042 981 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 RCSD1Q6JBY9 416 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 MIGA2Q7L4E1 593 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 KRT26Q7Z3Y9 468 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 USP48Q86UV5 1035 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 FANCBQ8NB91 859 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 TMEM47Q9BQJ4 181 aa17.95■□□□□ 0.46
VAMP1-207ENST00000539047 GH2P01242 217 aa17.94■□□□□ 0.46
VAMP1-207ENST00000539047 HSPA6P17066 643 aa17.94■□□□□ 0.46
VAMP1-207ENST00000539047 MAP3K10Q02779 954 aa17.94■□□□□ 0.46
VAMP1-207ENST00000539047 NSUN7Q8NE18 718 aaKnown RBP17.94■□□□□ 0.46
VAMP1-207ENST00000539047 WASF1Q92558 559 aa17.94■□□□□ 0.46
VAMP1-207ENST00000539047 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
VAMP1-207ENST00000539047 CLIP2Q9UDT6 1046 aa17.94■□□□□ 0.46
VAMP1-207ENST00000539047 PGAP2Q9UHJ9 254 aa17.94■□□□□ 0.46
VAMP1-207ENST00000539047 ZBTB21Q9ULJ3 1066 aa17.94■□□□□ 0.46
VAMP1-207ENST00000539047 SYNPO2Q9UMS6 1093 aa17.94■□□□□ 0.46
VAMP1-207ENST00000539047 SCAF8Q9UPN6 1271 aaKnown RBP17.94■□□□□ 0.46
VAMP1-207ENST00000539047 VEGFAP15692 232 aaPredicted RBP17.93■□□□□ 0.46
VAMP1-207ENST00000539047 CAP2P40123 477 aa17.93■□□□□ 0.46
VAMP1-207ENST00000539047 SSRP1Q08945 709 aaKnown RBP17.93■□□□□ 0.46
VAMP1-207ENST00000539047 ST3GAL1Q11201 340 aa17.93■□□□□ 0.46
VAMP1-207ENST00000539047 SEPT2Q15019 361 aa17.93■□□□□ 0.46
VAMP1-207ENST00000539047 NBPF12Q5TAG4 269 aaPredicted RBP17.93■□□□□ 0.46
VAMP1-207ENST00000539047 LZTS2Q9BRK4 669 aa17.93■□□□□ 0.46
VAMP1-207ENST00000539047 CLEC11AQ9Y240 323 aa17.93■□□□□ 0.46
VAMP1-207ENST00000539047 STK36Q9NRP7 1315 aa17.93■□□□□ 0.46
VAMP1-207ENST00000539047 CTNND1O60716 968 aaKnown RBP17.92■□□□□ 0.46
VAMP1-207ENST00000539047 PARP1P09874 1014 aaKnown RBP17.92■□□□□ 0.46
VAMP1-207ENST00000539047 NOVP48745 357 aa17.92■□□□□ 0.46
VAMP1-207ENST00000539047 TROAPQ12815 778 aa17.92■□□□□ 0.46
VAMP1-207ENST00000539047 GRM4Q14833 912 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms