RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZNF277Q9NRM2 450 aaPredicted RBP16.7■□□□□ 0.26
CDCA3-207ENST00000538862 RTL9Q8NET4 1388 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 MMP1P03956 469 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 ARMCX5Q6P1M9 558 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 KRBA2Q6ZNG9 492 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 TRIM22Q8IYM9 498 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 KRI1Q8N9T8 703 aaKnown RBP16.69■□□□□ 0.26
CDCA3-207ENST00000538862 ZNF592Q92610 1267 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 HSD3B7Q9H2F3 369 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 INCENPQ9NQS7 918 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 TACC3Q9Y6A5 838 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 LTBP3Q9NS15 1303 aa16.69■□□□□ 0.26
CDCA3-207ENST00000538862 MYL5Q02045 173 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 FEZ1Q99689 392 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 MYL10Q9BUA6 226 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 FOXP1Q9H334 677 aaPredicted RBP16.68■□□□□ 0.26
CDCA3-207ENST00000538862 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
CDCA3-207ENST00000538862 NMRK2Q9NPI5 230 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 TRMT1Q9NXH9 659 aaKnown RBP16.68■□□□□ 0.26
CDCA3-207ENST00000538862 CGNQ9P2M7 1197 aaKnown RBP16.68■□□□□ 0.26
CDCA3-207ENST00000538862 HOOK1Q9UJC3 728 aaKnown RBP16.68■□□□□ 0.26
CDCA3-207ENST00000538862 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 SNED1Q8TER0 1413 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 ERICH2A1L162 156 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 LMOD1P29536 600 aaPredicted RBP16.68■□□□□ 0.26
CDCA3-207ENST00000538862 PNOCQ13519 176 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 WTAPQ15007 396 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 RTN1Q16799 776 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 CCDC152Q4G0S7 254 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 E4F1Q66K89 784 aaPredicted RBP16.68■□□□□ 0.26
CDCA3-207ENST00000538862 CNNM3Q8NE01 707 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 CLIC6Q96NY7 704 aa16.68■□□□□ 0.26
CDCA3-207ENST00000538862 NOL10Q9BSC4 688 aaKnown RBP16.68■□□□□ 0.26
CDCA3-207ENST00000538862 DEXIO95424 95 aa16.67■□□□□ 0.26
CDCA3-207ENST00000538862 IGHMBP2P38935 993 aaKnown RBP16.67■□□□□ 0.26
CDCA3-207ENST00000538862 TDO2P48775 406 aa16.67■□□□□ 0.26
CDCA3-207ENST00000538862 LONRF3Q496Y0 759 aa16.67■□□□□ 0.26
CDCA3-207ENST00000538862 RILPL1Q5EBL4 403 aa16.67■□□□□ 0.26
CDCA3-207ENST00000538862 METTL16Q86W50 562 aaKnown RBP16.67■□□□□ 0.26
CDCA3-207ENST00000538862 RTKN2Q8IZC4 609 aa16.67■□□□□ 0.26
CDCA3-207ENST00000538862 CELF1Q92879 486 aaKnown RBP16.67■□□□□ 0.26
CDCA3-207ENST00000538862 SLC4A4Q9Y6R1 1079 aa16.67■□□□□ 0.26
CDCA3-207ENST00000538862 CCP110O43303 1012 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 GRAPQ13588 217 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 PPP2R5BQ15173 497 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 SF3B3Q15393 1217 aaKnown RBP16.66■□□□□ 0.26
CDCA3-207ENST00000538862 LCORLQ8N3X6 602 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 GRAPLQ8TC17 118 aaPredicted RBP16.66■□□□□ 0.26
CDCA3-207ENST00000538862 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 BTBD18B2RXH4 712 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 PRKAB2O43741 272 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 UBASH3AP57075 661 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 MDM2Q00987 491 aaPredicted RBP16.66■□□□□ 0.26
CDCA3-207ENST00000538862 ISM2Q6H9L7 571 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 DIS3L2Q8IYB7 885 aaKnown RBP16.66■□□□□ 0.26
CDCA3-207ENST00000538862 CRACR2BQ8N4Y2 399 aaPredicted RBP16.66■□□□□ 0.26
CDCA3-207ENST00000538862 ZNF579Q8NAF0 562 aaKnown RBP16.66■□□□□ 0.26
CDCA3-207ENST00000538862 ATP6V0A2Q9Y487 856 aa16.66■□□□□ 0.26
CDCA3-207ENST00000538862 PTPREP23469 700 aa16.65■□□□□ 0.26
CDCA3-207ENST00000538862 TOB1P50616 345 aaPredicted RBP16.65■□□□□ 0.26
CDCA3-207ENST00000538862 BCAMP50895 628 aa16.65■□□□□ 0.26
CDCA3-207ENST00000538862 STK11IPQ8N1F8 1099 aa16.65■□□□□ 0.26
CDCA3-207ENST00000538862 ERO1AQ96HE7 468 aa16.65■□□□□ 0.26
CDCA3-207ENST00000538862 PPP1R13BQ96KQ4 1090 aa16.65■□□□□ 0.26
CDCA3-207ENST00000538862 PCDHA5Q9Y5H7 936 aa16.65■□□□□ 0.26
CDCA3-207ENST00000538862 UBE2Q2LH0YL09 131 aa16.64■□□□□ 0.26
CDCA3-207ENST00000538862 SNAP23O00161 211 aa16.64■□□□□ 0.26
CDCA3-207ENST00000538862 KIF3CO14782 793 aa16.64■□□□□ 0.26
CDCA3-207ENST00000538862 SERPINC1P01008 464 aa16.64■□□□□ 0.26
CDCA3-207ENST00000538862 ATP1A3P13637 1013 aa16.64■□□□□ 0.26
CDCA3-207ENST00000538862 GUCY1A2P33402 732 aa16.64■□□□□ 0.26
CDCA3-207ENST00000538862 RRP12Q5JTH9 1297 aaKnown RBP16.64■□□□□ 0.26
CDCA3-207ENST00000538862 NT5DC1Q5TFE4 455 aa16.64■□□□□ 0.26
CDCA3-207ENST00000538862 FOXP4Q8IVH2 680 aaPredicted RBP16.64■□□□□ 0.26
CDCA3-207ENST00000538862 LRP2BPQ9P2M1 347 aa16.64■□□□□ 0.26
CDCA3-207ENST00000538862 MORC2Q9Y6X9 1032 aaPredicted RBP16.64■□□□□ 0.26
CDCA3-207ENST00000538862 BBOX1O75936 387 aa16.64■□□□□ 0.25
CDCA3-207ENST00000538862 CBX1P83916 185 aa16.64■□□□□ 0.25
CDCA3-207ENST00000538862 PPARAQ07869 468 aa16.64■□□□□ 0.25
CDCA3-207ENST00000538862 CC2D2BQ6DHV5 1058 aa16.64■□□□□ 0.25
CDCA3-207ENST00000538862 FANCBQ8NB91 859 aa16.64■□□□□ 0.25
CDCA3-207ENST00000538862 TOMM22Q9NS69 142 aa16.64■□□□□ 0.25
CDCA3-207ENST00000538862 ANAPC4Q9UJX5 808 aa16.64■□□□□ 0.25
CDCA3-207ENST00000538862 FBXO2Q9UK22 296 aaPredicted RBP16.64■□□□□ 0.25
CDCA3-207ENST00000538862 CEP131Q9UPN4 1083 aa16.64■□□□□ 0.25
CDCA3-207ENST00000538862 COL4A5P29400 1685 aa16.64■□□□□ 0.25
CDCA3-207ENST00000538862 SLU7O95391 586 aaKnown RBP16.63■□□□□ 0.25
CDCA3-207ENST00000538862 KANK3Q6NY19 840 aa16.63■□□□□ 0.25
CDCA3-207ENST00000538862 VSTM4Q8IW00 320 aa16.63■□□□□ 0.25
CDCA3-207ENST00000538862 PSMD1Q99460 953 aa16.63■□□□□ 0.25
CDCA3-207ENST00000538862 TMX1Q9H3N1 280 aa16.63■□□□□ 0.25
CDCA3-207ENST00000538862 L2HGDHQ9H9P8 463 aa16.63■□□□□ 0.25
CDCA3-207ENST00000538862 RRAGCQ9HB90 399 aa16.63■□□□□ 0.25
CDCA3-207ENST00000538862 OGFRQ9NZT2 677 aa16.63■□□□□ 0.25
CDCA3-207ENST00000538862 ZNF215Q9UL58 517 aaPredicted RBP16.63■□□□□ 0.25
CDCA3-207ENST00000538862 ZC3H4Q9UPT8 1303 aaKnown RBP16.63■□□□□ 0.25
CDCA3-207ENST00000538862 GLTPD2A6NH11 291 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 CHRNDQ07001 517 aa16.62■□□□□ 0.25
CDCA3-207ENST00000538862 SP8Q8IXZ3 490 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms