RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 RABL6Q3YEC7 729 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 FAM76AQ8TAV0 307 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 CRACR2AQ9BSW2 395 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 METTL22Q9BUU2 404 aaPredicted RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 GPR108Q9NPR9 543 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 DMGDHQ9UI17 866 aaKnown RBP10.19□□□□□ -0.78
SNHG1-209ENST00000538654 HPCAL4Q9UM19 191 aa10.19□□□□□ -0.78
SNHG1-209ENST00000538654 ZMYM6O95789 1325 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 SHTN1A0MZ66 631 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 CHGBP05060 677 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 MAP2K2P36507 400 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 PSEN1P49768 467 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 USP14P54578 494 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 MCCD1P59942 119 aaPredicted RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 FMR1Q06787 632 aaKnown RBP eCLIP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 AIMP1Q12904 312 aaKnown RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 TTLL12Q14166 644 aaPredicted RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 HSP90AA4PQ58FG1 418 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 TTC30BQ8N4P2 665 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 COG1Q8WTW3 980 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 IP6K1Q92551 441 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 TEX13AQ9BXU3 409 aaPredicted RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 CXorf56Q9H5V9 222 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 WDR17Q8IZU2 1322 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 ATXN2Q99700 1313 aaKnown RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 STK10O94804 968 aaKnown RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 CCDC172P0C7W6 258 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 CKAP4Q07065 602 aaKnown RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 SEMA3FQ13275 785 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 TRIM14Q14142 442 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 SART3Q15020 963 aaKnown RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 EPHA10Q5JZY3 1008 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 SPATA1Q5VX52 437 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 EGFLAMQ63HQ2 1017 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 KRT40Q6A162 431 aa10.18□□□□□ -0.78
SNHG1-209ENST00000538654 MB21D2Q8IYB1 491 aaPredicted RBP10.18□□□□□ -0.78
SNHG1-209ENST00000538654 GOLGA6CA6NDK9 693 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 GOLGA6BA6NDN3 693 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 GOLGA6DP0CG33 693 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 PBX1P40424 430 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 MNAT1P51948 309 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 IGBP1P78318 339 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 AMPD2Q01433 879 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 PPFIA1Q13136 1202 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 NBPF14Q5TI25 921 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 CYP26C1Q6V0L0 522 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 MPRIPQ6WCQ1 1025 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 CLIC6Q96NY7 704 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 GOLGA6AQ9NYA3 693 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 CPDO75976 1380 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 EXOC5O00471 708 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 ZFYP08048 801 aaPredicted RBP10.17□□□□□ -0.78
SNHG1-209ENST00000538654 AKAP17AQ02040 695 aaKnown RBP10.17□□□□□ -0.78
SNHG1-209ENST00000538654 WDR78Q5VTH9 848 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 SPATS2Q86XZ4 545 aaKnown RBP10.17□□□□□ -0.78
SNHG1-209ENST00000538654 ZNF579Q8NAF0 562 aaKnown RBP10.17□□□□□ -0.78
SNHG1-209ENST00000538654 NOA1Q8NC60 698 aaKnown RBP10.17□□□□□ -0.78
SNHG1-209ENST00000538654 ADAMTS19Q8TE59 1207 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 SAMSN1Q9NSI8 373 aaKnown RBP10.17□□□□□ -0.78
SNHG1-209ENST00000538654 CEP83Q9Y592 693 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 FAM169AQ9Y6X4 670 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 UBR1Q8IWV7 1749 aa10.17□□□□□ -0.78
SNHG1-209ENST00000538654 AFDNP55196 1824 aaKnown RBP10.17□□□□□ -0.78
SNHG1-209ENST00000538654 SIPA1L3O60292 1781 aaPredicted RBP10.17□□□□□ -0.78
SNHG1-209ENST00000538654 APPP05067 770 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 CSB-PGBD3P0DP91 1061 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 TTLL5Q6EMB2 1281 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 IQCEQ6IPM2 695 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 CCDC70Q6NSX1 233 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 TRMT44Q8IYL2 757 aaKnown RBP10.16□□□□□ -0.78
SNHG1-209ENST00000538654 ABTB2Q8N961 1025 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.16□□□□□ -0.78
SNHG1-209ENST00000538654 PBXIP1Q96AQ6 731 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 CDC5LQ99459 802 aaKnown RBP10.16□□□□□ -0.78
SNHG1-209ENST00000538654 MYD88Q99836 296 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 GJB4Q9NTQ9 266 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 ADD3Q9UEY8 706 aaKnown RBP10.16□□□□□ -0.78
SNHG1-209ENST00000538654 ANKRD65E5RJM6 399 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 HNRNPH1P31943 449 aaKnown RBP10.16□□□□□ -0.78
SNHG1-209ENST00000538654 B4GALNT4Q76KP1 1039 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 CPLX3Q8WVH0 158 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 STAG1Q8WVM7 1258 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 ESF1Q9H501 851 aaKnown RBP10.16□□□□□ -0.78
SNHG1-209ENST00000538654 A1CFQ9NQ94 594 aaKnown RBP10.16□□□□□ -0.78
SNHG1-209ENST00000538654 GPHNQ9NQX3 736 aaPredicted RBP10.16□□□□□ -0.78
SNHG1-209ENST00000538654 MAP3K20Q9NYL2 800 aaKnown RBP10.16□□□□□ -0.78
SNHG1-209ENST00000538654 DONSONQ9NYP3 566 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 SYNRGQ9UMZ2 1314 aa10.16□□□□□ -0.78
SNHG1-209ENST00000538654 A0A0G2JLW4 131 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 IFIT1P09914 478 aaKnown RBP10.15□□□□□ -0.78
SNHG1-209ENST00000538654 INPP5BP32019 993 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 CCT5P48643 541 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 METAP2P50579 478 aaKnown RBP eCLIP10.15□□□□□ -0.78
SNHG1-209ENST00000538654 IRAK1P51617 712 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 PDIA6Q15084 440 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 SLC9C2Q5TAH2 1124 aa10.15□□□□□ -0.78
SNHG1-209ENST00000538654 APTXQ7Z2E3 356 aaKnown RBP10.15□□□□□ -0.78
SNHG1-209ENST00000538654 TRAPPC11Q7Z392 1133 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms